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PaGL#56_02189 Locus tags: • Sequence Length: 415

Dietzia cinnamea, 55 Batch3_genome_fasta/D.cinnamea

5050100100150150200200250250300300350350400400450450
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PaGL#56_02186 PaGL#56_02187 PaGL#56_02189 PaGL#56_02191 PaGL#56_02192 PaGL#56_02193 
    [PF03990]_[PF03990]_[PF03990]_[PF07501]_[PF06737]_[TM]

    [61:PF03990]_[116:PF03990]_[187:PF03990]_[232:PF07501]_[317:PF06737]_[TM]

    [61:IPR007137]_[116:IPR007137]_[187:IPR007137]_[225:IPR011098]_[227:IPR011098]_[232:IPR011098]_[314:IPR023346]_[317:IPR010618]_[318:IPR010618]_[TM]

Looking for similar signatures in the working genomes

PF03990:DUF348. G5-linked-Ubiquitin-like domain

Found 61 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514194.1:LOMAGDGF_0283641-82
100-137
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_0303559-100
116-156
Acetivibrio alkalicellulosi, DSM 17461 2510063125:NJMEOJLD_0331251-77
99-128
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936342.1:NEIHKHHH_0406841-78
101-136
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_0006431-73
89-125
Paenibacillus guangzhouensis, KCTC 33171 WP_152395787.1:KDFAKKPF_0487056-96
115-154
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_0304459-100
116-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_0023146-87
105-140
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0216633-75
91-127
Syntrophomonas curvata, Scurva Scurva_0006333-74
91-127
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0140633-75
91-127
Syntrophomonas wolfei methylbutyratica, Swm Swm_0005931-73
89-125
Terrisporobacter hibernicus, AnGL54 AnGL54_0087831-71
AnGL54_0242132-73
Syntrophomonas erecta, GB-438 Ga0610585_0216633-75
91-127
Dietzia cinnamea, 55 PaGL#56_0218961-96
116-143
187-215
Exiguobacterium mexicanum, AnGL24 AnGL24_0303827-68
84-124
143-182
Clostridium subterminale, CB-LS10-1 AnGL53_0015440-81
97-138
Geodermatophilus sp., RDM14 PaGL#36_0080850-90
109-139
164-201
Fictibacillus phosphorivorans, TY7 PaGL#38_0042742-83
100-139
156-195
Syntrophomonas wolfei, saponavida Swsap_0124130-72
90-124
Bacillus subtilis, 30VD-1 PaGL#66_0014369-108
126-167
183-224
Peribacillus frigoritolerans, 30N-5 PaGL#67_0023024-64
86-121
139-178
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0160831-71
AnGL54_0322532-73
Niallia taxi, AG-1 PaGL#37_0004863-104
120-157
178-217
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109125:Spalm_0154633-75
91-127
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_0006431-73
89-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_0041533-75
91-127

PF03990:DUF348. G5-linked-Ubiquitin-like domain

Found 61 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514194.1:LOMAGDGF_0283641-82
100-137
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_0303559-100
116-156
Acetivibrio alkalicellulosi, DSM 17461 2510063125:NJMEOJLD_0331251-77
99-128
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936342.1:NEIHKHHH_0406841-78
101-136
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_0006431-73
89-125
Paenibacillus guangzhouensis, KCTC 33171 WP_152395787.1:KDFAKKPF_0487056-96
115-154
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_0304459-100
116-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_0023146-87
105-140
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0216633-75
91-127
Syntrophomonas curvata, Scurva Scurva_0006333-74
91-127
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0140633-75
91-127
Syntrophomonas wolfei methylbutyratica, Swm Swm_0005931-73
89-125
Terrisporobacter hibernicus, AnGL54 AnGL54_0087831-71
AnGL54_0242132-73
Syntrophomonas erecta, GB-438 Ga0610585_0216633-75
91-127
Dietzia cinnamea, 55 PaGL#56_0218961-96
116-143
187-215
Exiguobacterium mexicanum, AnGL24 AnGL24_0303827-68
84-124
143-182
Clostridium subterminale, CB-LS10-1 AnGL53_0015440-81
97-138
Geodermatophilus sp., RDM14 PaGL#36_0080850-90
109-139
164-201
Fictibacillus phosphorivorans, TY7 PaGL#38_0042742-83
100-139
156-195
Syntrophomonas wolfei, saponavida Swsap_0124130-72
90-124
Bacillus subtilis, 30VD-1 PaGL#66_0014369-108
126-167
183-224
Peribacillus frigoritolerans, 30N-5 PaGL#67_0023024-64
86-121
139-178
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0160831-71
AnGL54_0322532-73
Niallia taxi, AG-1 PaGL#37_0004863-104
120-157
178-217
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109125:Spalm_0154633-75
91-127
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_0006431-73
89-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_0041533-75
91-127

PF03990:DUF348. G5-linked-Ubiquitin-like domain

Found 61 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514194.1:LOMAGDGF_0283641-82
100-137
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_0303559-100
116-156
Acetivibrio alkalicellulosi, DSM 17461 2510063125:NJMEOJLD_0331251-77
99-128
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936342.1:NEIHKHHH_0406841-78
101-136
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_0006431-73
89-125
Paenibacillus guangzhouensis, KCTC 33171 WP_152395787.1:KDFAKKPF_0487056-96
115-154
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_0304459-100
116-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_0023146-87
105-140
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0216633-75
91-127
Syntrophomonas curvata, Scurva Scurva_0006333-74
91-127
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0140633-75
91-127
Syntrophomonas wolfei methylbutyratica, Swm Swm_0005931-73
89-125
Terrisporobacter hibernicus, AnGL54 AnGL54_0087831-71
AnGL54_0242132-73
Syntrophomonas erecta, GB-438 Ga0610585_0216633-75
91-127
Dietzia cinnamea, 55 PaGL#56_0218961-96
116-143
187-215
Exiguobacterium mexicanum, AnGL24 AnGL24_0303827-68
84-124
143-182
Clostridium subterminale, CB-LS10-1 AnGL53_0015440-81
97-138
Geodermatophilus sp., RDM14 PaGL#36_0080850-90
109-139
164-201
Fictibacillus phosphorivorans, TY7 PaGL#38_0042742-83
100-139
156-195
Syntrophomonas wolfei, saponavida Swsap_0124130-72
90-124
Bacillus subtilis, 30VD-1 PaGL#66_0014369-108
126-167
183-224
Peribacillus frigoritolerans, 30N-5 PaGL#67_0023024-64
86-121
139-178
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0160831-71
AnGL54_0322532-73
Niallia taxi, AG-1 PaGL#37_0004863-104
120-157
178-217
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109125:Spalm_0154633-75
91-127
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_0006431-73
89-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_0041533-75
91-127

PF07501:G5. G5 domain

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516459.1:LOMAGDGF_00018465-529
WP_003515677.1:LOMAGDGF_01192381-450
WP_003514194.1:LOMAGDGF_02836158-231
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_03035175-246
Acetivibrio alkalicellulosi, DSM 17461 2510060904:NJMEOJLD_01141458-527
2510061710:NJMEOJLD_01926380-449
2510062333:NJMEOJLD_02533365-432
2510063125:NJMEOJLD_03312157-230
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753384.1:NEIHKHHH_023864-71
WP_036944662.1:NEIHKHHH_03526375-447
WP_036936342.1:NEIHKHHH_04068157-232
WP_050753798.1:NEIHKHHH_05098471-541
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_00064146-219
Ga0065332_11483:GJLLLGJL_00470337-404
GJLLLGJL_00483375-443
Ga0065332_112641:GJLLLGJL_02593249-317
Paenibacillus guangzhouensis, KCTC 33171 WP_152395501.1:KDFAKKPF_04518386-450
WP_152395787.1:KDFAKKPF_04870171-244
WP_152395842.1:KDFAKKPF_04942284-358
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_03044175-246
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_00231162-236
WP_137696075.1:PROKKA_01968393-461
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00465337-406
OINOEOOJ_00479381-451
OINOEOOJ_02166147-220
OINOEOOJ_02264249-316
FD_YE_37_9_2, AnGL4 AnGL4_00962330-404
Syntrophomonas curvata, Scurva Scurva_00063148-221
Scurva_00959331-400
Scurva_00972375-444
Scurva_02947249-317
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00525381-451
Sespor_00539337-406
Sespor_01256249-316
Sespor_01406147-220
Syntrophomonas wolfei methylbutyratica, Swm Swm_00059146-219
Swm_00495337-404
Swm_00509375-443
Swm_02985249-317
Terrisporobacter hibernicus, AnGL54 AnGL54_00831372-440
AnGL54_0087889-160
AnGL54_0242188-163
AnGL54_02908368-440
Paraclostridium benzoelyticum, AnGL27 AnGL27_03479375-441
FD-YE-37-9-3, AnGL29 AnGL29_01687330-404
Syntrophomonas erecta, GB-438 Ga0610585_00465337-406
Ga0610585_00479381-451
Ga0610585_02166147-220
Ga0610585_02264249-316
Dietzia cinnamea, 55 PaGL#56_02189232-305
Exiguobacterium mexicanum, AnGL24 AnGL24_01002280-348
AnGL24_03038203-273
Clostridium subterminale, CB-LS10-1 AnGL53_00154157-227
AnGL53_00787388-455
AnGL53_00788403-472
AnGL53_02581381-447
Geodermatophilus sp., RDM14 PaGL#36_00808221-295
Fictibacillus phosphorivorans, TY7 PaGL#38_00427214-287
PaGL#38_04771283-355
Syntrophomonas wolfei, saponavida Swsap_01075249-317
Swsap_01241145-217
Bacillus subtilis, 30VD-1 PaGL#66_00143242-315
Peribacillus frigoritolerans, 30N-5 PaGL#67_00230195-268
PaGL#67_00303268-342
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01561372-440
AnGL54_0160889-160
AnGL54_0322588-163
AnGL54_03711368-440
Niallia taxi, AG-1 PaGL#37_00048235-307
PaGL#37_02862315-380
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11393:Spalm_01981248-318
Ga0128340_11098:Spalm_01660243-312
Ga0128340_110114:Spalm_01676257-328
Ga0128340_109125:Spalm_01546147-221
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_00064146-219
Ga0065332_11483:Swol_00470337-404
Swol_00483375-443
Ga0065332_112641:Swol_02593249-317
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_00415149-220
Ga0124040_10448:Szehn_00158246-315
Szehn_00664373-444
Ga0124040_109106:Szehn_00677343-408

PF06737:Transglycosylas. Transglycosylase-like domain

Found 7 similar signatures
Dietzia cinnamea, 55 PaGL#56_0081842-119
PaGL#56_02189317-389
PaGL#56_0313232-108
Geodermatophilus sp., RDM14 PaGL#36_00808306-378
PaGL#36_0233735-112
PaGL#36_02718275-351
Micromonospora inositola, Utrum1 PaGL#61_0421142-117
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