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GJLLLGJL_00064 Locus tags: • Sequence Length: 336

Syntrophomonas wolfei subsp. wolfei, Goettingen 637000316

5050100100150150200200250250300300350350
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GJLLLGJL_00060 GJLLLGJL_00062 GJLLLGJL_00064 GJLLLGJL_00066 GJLLLGJL_00069 
    [SP]_[PF03990]_[PF03990]_[PF07501]_[PF06725]_[TM]

    [SP]_[31:PF03990]_[89:PF03990]_[146:PF07501]_[260:PF06725]_[TM]

    [SP]_[31:IPR007137]_[89:IPR007137]_[140:IPR011098]_[142:IPR011098]_[146:IPR011098]_[260:IPR010611]_[260:IPR036908]_[TM]

Looking for similar signatures in the working genomes

PF03990:DUF348. G5-linked-Ubiquitin-like domain

Found 61 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514194.1:LOMAGDGF_0283641-82
100-137
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_0303559-100
116-156
Acetivibrio alkalicellulosi, DSM 17461 2510063125:NJMEOJLD_0331251-77
99-128
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936342.1:NEIHKHHH_0406841-78
101-136
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_0006431-73
89-125
Paenibacillus guangzhouensis, KCTC 33171 WP_152395787.1:KDFAKKPF_0487056-96
115-154
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_0304459-100
116-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_0023146-87
105-140
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0216633-75
91-127
Syntrophomonas curvata, Scurva Scurva_0006333-74
91-127
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0140633-75
91-127
Syntrophomonas wolfei methylbutyratica, Swm Swm_0005931-73
89-125
Terrisporobacter hibernicus, AnGL54 AnGL54_0087831-71
AnGL54_0242132-73
Syntrophomonas erecta, GB-438 Ga0610585_0216633-75
91-127
Dietzia cinnamea, 55 PaGL#56_0218961-96
116-143
187-215
Exiguobacterium mexicanum, AnGL24 AnGL24_0303827-68
84-124
143-182
Clostridium subterminale, CB-LS10-1 AnGL53_0015440-81
97-138
Geodermatophilus sp., RDM14 PaGL#36_0080850-90
109-139
164-201
Fictibacillus phosphorivorans, TY7 PaGL#38_0042742-83
100-139
156-195
Syntrophomonas wolfei, saponavida Swsap_0124130-72
90-124
Bacillus subtilis, 30VD-1 PaGL#66_0014369-108
126-167
183-224
Peribacillus frigoritolerans, 30N-5 PaGL#67_0023024-64
86-121
139-178
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0160831-71
AnGL54_0322532-73
Niallia taxi, AG-1 PaGL#37_0004863-104
120-157
178-217
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109125:Spalm_0154633-75
91-127
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_0006431-73
89-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_0041533-75
91-127

PF03990:DUF348. G5-linked-Ubiquitin-like domain

Found 61 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514194.1:LOMAGDGF_0283641-82
100-137
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_0303559-100
116-156
Acetivibrio alkalicellulosi, DSM 17461 2510063125:NJMEOJLD_0331251-77
99-128
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936342.1:NEIHKHHH_0406841-78
101-136
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_0006431-73
89-125
Paenibacillus guangzhouensis, KCTC 33171 WP_152395787.1:KDFAKKPF_0487056-96
115-154
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_0304459-100
116-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_0023146-87
105-140
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0216633-75
91-127
Syntrophomonas curvata, Scurva Scurva_0006333-74
91-127
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0140633-75
91-127
Syntrophomonas wolfei methylbutyratica, Swm Swm_0005931-73
89-125
Terrisporobacter hibernicus, AnGL54 AnGL54_0087831-71
AnGL54_0242132-73
Syntrophomonas erecta, GB-438 Ga0610585_0216633-75
91-127
Dietzia cinnamea, 55 PaGL#56_0218961-96
116-143
187-215
Exiguobacterium mexicanum, AnGL24 AnGL24_0303827-68
84-124
143-182
Clostridium subterminale, CB-LS10-1 AnGL53_0015440-81
97-138
Geodermatophilus sp., RDM14 PaGL#36_0080850-90
109-139
164-201
Fictibacillus phosphorivorans, TY7 PaGL#38_0042742-83
100-139
156-195
Syntrophomonas wolfei, saponavida Swsap_0124130-72
90-124
Bacillus subtilis, 30VD-1 PaGL#66_0014369-108
126-167
183-224
Peribacillus frigoritolerans, 30N-5 PaGL#67_0023024-64
86-121
139-178
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0160831-71
AnGL54_0322532-73
Niallia taxi, AG-1 PaGL#37_0004863-104
120-157
178-217
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109125:Spalm_0154633-75
91-127
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_0006431-73
89-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_0041533-75
91-127

PF07501:G5. G5 domain

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516459.1:LOMAGDGF_00018465-529
WP_003515677.1:LOMAGDGF_01192381-450
WP_003514194.1:LOMAGDGF_02836158-231
Clostridium acetobutylicum, DSM 1731 WP_014519025.1:FHOCHPCF_03035175-246
Acetivibrio alkalicellulosi, DSM 17461 2510060904:NJMEOJLD_01141458-527
2510061710:NJMEOJLD_01926380-449
2510062333:NJMEOJLD_02533365-432
2510063125:NJMEOJLD_03312157-230
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753384.1:NEIHKHHH_023864-71
WP_036944662.1:NEIHKHHH_03526375-447
WP_036936342.1:NEIHKHHH_04068157-232
WP_050753798.1:NEIHKHHH_05098471-541
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_00064146-219
Ga0065332_11483:GJLLLGJL_00470337-404
GJLLLGJL_00483375-443
Ga0065332_112641:GJLLLGJL_02593249-317
Paenibacillus guangzhouensis, KCTC 33171 WP_152395501.1:KDFAKKPF_04518386-450
WP_152395787.1:KDFAKKPF_04870171-244
WP_152395842.1:KDFAKKPF_04942284-358
Clostridium acetobutylicum, ATCC 824 WP_014519025.1:OJAMHIDJ_03044175-246
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_00231162-236
WP_137696075.1:PROKKA_01968393-461
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00465337-406
OINOEOOJ_00479381-451
OINOEOOJ_02166147-220
OINOEOOJ_02264249-316
FD_YE_37_9_2, AnGL4 AnGL4_00962330-404
Syntrophomonas curvata, Scurva Scurva_00063148-221
Scurva_00959331-400
Scurva_00972375-444
Scurva_02947249-317
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00525381-451
Sespor_00539337-406
Sespor_01256249-316
Sespor_01406147-220
Syntrophomonas wolfei methylbutyratica, Swm Swm_00059146-219
Swm_00495337-404
Swm_00509375-443
Swm_02985249-317
Terrisporobacter hibernicus, AnGL54 AnGL54_00831372-440
AnGL54_0087889-160
AnGL54_0242188-163
AnGL54_02908368-440
Paraclostridium benzoelyticum, AnGL27 AnGL27_03479375-441
FD-YE-37-9-3, AnGL29 AnGL29_01687330-404
Syntrophomonas erecta, GB-438 Ga0610585_00465337-406
Ga0610585_00479381-451
Ga0610585_02166147-220
Ga0610585_02264249-316
Dietzia cinnamea, 55 PaGL#56_02189232-305
Exiguobacterium mexicanum, AnGL24 AnGL24_01002280-348
AnGL24_03038203-273
Clostridium subterminale, CB-LS10-1 AnGL53_00154157-227
AnGL53_00787388-455
AnGL53_00788403-472
AnGL53_02581381-447
Geodermatophilus sp., RDM14 PaGL#36_00808221-295
Fictibacillus phosphorivorans, TY7 PaGL#38_00427214-287
PaGL#38_04771283-355
Syntrophomonas wolfei, saponavida Swsap_01075249-317
Swsap_01241145-217
Bacillus subtilis, 30VD-1 PaGL#66_00143242-315
Peribacillus frigoritolerans, 30N-5 PaGL#67_00230195-268
PaGL#67_00303268-342
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01561372-440
AnGL54_0160889-160
AnGL54_0322588-163
AnGL54_03711368-440
Niallia taxi, AG-1 PaGL#37_00048235-307
PaGL#37_02862315-380
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11393:Spalm_01981248-318
Ga0128340_11098:Spalm_01660243-312
Ga0128340_110114:Spalm_01676257-328
Ga0128340_109125:Spalm_01546147-221
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_00064146-219
Ga0065332_11483:Swol_00470337-404
Swol_00483375-443
Ga0065332_112641:Swol_02593249-317
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_00415149-220
Ga0124040_10448:Szehn_00158246-315
Szehn_00664373-444
Ga0124040_109106:Szehn_00677343-408

PF06725:3D. 3D domain

Found 110 similar signatures
Acetivibrio thermocellus, DSM 1313 LOMAGDGF_00093352-405
WP_003516640.1:LOMAGDGF_01607197-258
WP_003512504.1:LOMAGDGF_01979271-324
WP_003514194.1:LOMAGDGF_02836284-350
Clostridium acetobutylicum, DSM 1731 FHOCHPCF_02087545-610
WP_014519025.1:FHOCHPCF_03035293-355
WP_010966314.1:FHOCHPCF_03079289-351
Acetivibrio alkalicellulosi, DSM 17461 2510060418:NJMEOJLD_00666195-256
2510061087:NJMEOJLD_01319483-536
2510063125:NJMEOJLD_03312283-349
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753021.1:NEIHKHHH_00561137-206
WP_050753238.1:NEIHKHHH_01523325-376
WP_036936342.1:NEIHKHHH_04068285-350
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1167:GJLLLGJL_00064260-320
Ga0065332_11786:GJLLLGJL_00772145-204
Paenibacillus guangzhouensis, KCTC 33171 WP_152393692.1:KDFAKKPF_02384182-252
KDFAKKPF_0359594-156
WP_152395787.1:KDFAKKPF_04870304-363
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_02095545-610
WP_014519025.1:OJAMHIDJ_03044293-355
WP_010966314.1:OJAMHIDJ_03088289-351
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697255.1:PROKKA_00231290-356
WP_137698597.1:PROKKA_02403191-252
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02166262-322
FD_25_27, AnGL8 AnGL8_02663269-346
FD_MS_7_1, AnGL28 AnGL28_01043103-164
AnGL28_0121984-144
FD_SO4_37_1, AnGL2 AnGL2_00173103-164
AnGL2_0034984-144
FD_YE_25_21, AnGL21 AnGL21_02458278-355
Syntrophus buswellii, Sbus Sbus_01479360-442
Sbus_01918311-393
Sbus_02092331-411
Syntrophomonas curvata, Scurva Scurva_00063262-322
Scurva_01150147-204
Scurva_02354142-201
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0130071-127
Sespor_01406262-322
Syntrophomonas wolfei methylbutyratica, Swm Swm_00059260-320
Swm_00859145-204
Terrisporobacter hibernicus, AnGL54 AnGL54_04362191-252
AnGL54_04483286-349
AnGL54_04484123-184
AnGL54_00878207-268
AnGL54_01751304-365
AnGL54_02421214-274
AnGL54_02624192-253
Paraclostridium benzoelyticum, AnGL27 AnGL27_01668231-293
AnGL27_01719247-308
FD-MS-7-8, AnGL9 AnGL9_01598110-170
AnGL9_02917126-187
Methylobacterium radiotolerans, GTSA1 PaGL#34_04040307-386
Syntrophomonas erecta, GB-438 Ga0610585_02166262-322
Variovorax sp., EBFNA2 PaGL#33_00569412-486
PaGL#33_05924302-374
Variovorax paradoxus, 2u118 PaGL#32_00557423-497
PaGL#32_05131302-374
Maridesulfovibrio salexigens, AnGL23 AnGL23_01567304-378
AnGL23_02219342-418
Exiguobacterium mexicanum, AnGL24 AnGL24_01397188-247
AnGL24_01591198-260
AnGL24_01998134-198
AnGL24_03038362-423
Clostridium subterminale, CB-LS10-1 AnGL53_00154279-341
Priestia megaterium, 10L1 PaGL#57_02590124-186
PaGL#57_04485269-330
PaGL#57_04726124-185
PaGL#57_05174278-339
PaGL#57_06501361-422
PaGL#57_06962370-431
Variovorax paradoxus, SPNA7 PaGL#43_00532424-498
PaGL#43_05333302-374
Methylorubrum populi, CTY4 PaGL#39_01530283-356
Fictibacillus phosphorivorans, TY7 PaGL#38_00427338-400
PaGL#38_01222133-195
PaGL#38_03849135-197
Syntrophomonas wolfei, saponavida Swsap_01241258-318
Bacillus subtilis, 30VD-1 PaGL#66_00143375-437
PaGL#66_01104122-184
PaGL#66_02212225-287
Peribacillus frigoritolerans, 30N-5 PaGL#67_00230321-381
PaGL#67_00713237-299
PaGL#67_01256205-264
PaGL#67_02805203-265
PaGL#67_05081126-185
Sphingomonas sp., CR2A3 PaGL#62_00008343-412
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01191191-252
AnGL54_01313286-349
AnGL54_01314123-184
AnGL54_01608207-268
AnGL54_02555304-365
AnGL54_03225214-274
AnGL54_03427192-253
Niallia taxi, AG-1 PaGL#37_00048357-419
PaGL#37_00451342-401
PaGL#37_01892186-247
PaGL#37_03232134-196
MPOB, Sfum 639701120:Sfum_00376306-388
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02226143-202
Ga0128340_109125:Spalm_01546261-322
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1167:Swol_00064260-320
Ga0065332_11786:Swol_00772145-204
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1053:Szehn_00415262-322
Ga0124040_13823:Szehn_02135147-207
Ga0124040_127146:Szehn_01607171-228
Syntrophus aciditrophicus, SB 637859638:SYN_01235378-460
637860766:SYN_02296354-434
Syntrophus gentianae, DSM8423 Ga0074853_1167:Sgen_02093310-392
Ga0074853_12040:Sgen_02417340-420
Ga0074853_11156:Sgen_01715367-449
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