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PaGL#43_00153 Locus tags: • Sequence Length: 429

Variovorax paradoxus, SPNA7 Batch3_genome_fasta/V.paradoxus.SPNA7

5050100100150150200200250250300300350350400400450450
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PaGL#43_05656 PaGL#43_00151 PaGL#43_00152 PaGL#43_05657 PaGL#43_00153 PaGL#43_05658 PaGL#43_00154 PaGL#43_05659 PaGL#43_00155 PaGL#43_05660 
    [SP]_[PF07670]_[TM]

    [SP]_[51:PF07670]_[TM]

    [SP]_[51:IPR011642]_[TM]

Looking for similar signatures in the working genomes

PF07670:Gate. Nucleoside recognition

Found 284 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520743.1:LOMAGDGF_00880560-685
WP_003517502.1:LOMAGDGF_0102068-139
WP_014522619.1:LOMAGDGF_01658352-447
513-641
WP_003514206.1:LOMAGDGF_0284242-150
Clostridium acetobutylicum, DSM 1731 WP_010963770.1:FHOCHPCF_00493278-371
438-558
WP_010963791.1:FHOCHPCF_0051442-151
WP_010963792.1:FHOCHPCF_0051543-142
WP_010964349.1:FHOCHPCF_01084358-453
526-650
Acetivibrio alkalicellulosi, DSM 17461 2510063130:NJMEOJLD_0331742-150
2510063734:NJMEOJLD_0391262-156
2510063844:NJMEOJLD_04019330-423
492-584
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942290.1:NEIHKHHH_01536247-329
WP_036945673.1:NEIHKHHH_0245142-150
WP_036939194.1:NEIHKHHH_03274375-470
536-660
Ruminococcus albus_7, DSM 20455 WP_013497739.1:HCIAFFOI_01075473-566
635-753
WP_013498009.1:HCIAFFOI_01367442-537
603-733
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0147447-148
GJLLLGJL_0147542-149
Ga0065332_111642:GJLLLGJL_01610137-227
307-432
Paenibacillus guangzhouensis, KCTC 33171 WP_152394000.1:KDFAKKPF_0272242-149
WP_152394807.1:KDFAKKPF_03672351-446
512-637
Clostridium acetobutylicum, ATCC 824 WP_010963770.1:OJAMHIDJ_00493278-371
438-558
WP_010963791.1:OJAMHIDJ_0051542-151
WP_010963792.1:OJAMHIDJ_0051643-142
WP_010964349.1:OJAMHIDJ_01087358-453
526-650
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697123.1:PROKKA_00084352-447
513-646
WP_137697126.1:PROKKA_00087352-446
513-637
WP_137697249.1:PROKKA_0022542-150
WP_137697250.1:PROKKA_0022647-148
PROKKA_0219491-174
Syntrophomonas erecta, DSM 16215 OINOEOOJ_003910-59
OINOEOOJ_0039218-109
OINOEOOJ_00899138-237
OINOEOOJ_01229298-390
453-549
OINOEOOJ_0148747-148
OINOEOOJ_0148842-149
OINOEOOJ_02276136-227
307-434
FD_25_22, AnGL7 AnGL7_01018350-443
511-692
AnGL7_01127136-232
AnGL7_01498296-390
457-593
AnGL7_0296998-194
FD_25_27, AnGL8 AnGL8_0258098-195
AnGL8_02637349-441
511-706
AnGL8_02863357-455
523-757
FD_MS_7_1, AnGL28 AnGL28_00564355-446
515-703
FD_SO4_25_1_F22, AnGL30 AnGL30_00108469-563
630-761
AnGL30_0105351-156
FD_SO4_37_1, AnGL2 AnGL2_03243355-446
515-703
FD_YE_25_21, AnGL21 AnGL21_01946357-455
523-760
AnGL21_02149350-442
510-693
AnGL21_0252094-191
AnGL21_03429141-235
FD_YE_37_3, AnGL26 AnGL26_00157343-433
510-672
AnGL26_0029466-172
AnGL26_01219151-251
AnGL26_03267456-550
617-788
FD_YE_37_8_2, AnGL3 AnGL3_00420456-549
617-804
AnGL3_01085141-228
311-446
AnGL3_0179451-158
276-380
FD_YE_37_9_2, AnGL4 AnGL4_00138358-449
520-643
AnGL4_02775296-390
458-597
Syntrophus buswellii, Sbus Sbus_00345438-531
599-716
Sbus_0193843-149
Sbus_02784362-452
523-687
Syntrophomonas curvata, Scurva Scurva_0067520-95
Scurva_01108307-400
Scurva_0198347-148
Scurva_0198443-149
Scurva_02535136-226
308-431
Scurva_02539369-459
531-677
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00111138-237
Sespor_0061118-109
Sespor_006120-59
Sespor_01244136-227
307-434
Sespor_0215142-149
Sespor_0215247-148
Sespor_02413298-390
453-549
Syntrophomonas wolfei methylbutyratica, Swm Swm_0164547-148
Swm_0164645-152
Swm_01794137-227
307-432
Swm_02058372-467
534-680
Terrisporobacter hibernicus, AnGL54 AnGL54_04247372-465
535-667
AnGL54_04533379-470
550-676
AnGL54_0334934-140
AnGL54_03514277-368
436-557
FD-25-21, AnGL21 AnGL21_01057296-390
457-593
AnGL21_01428136-232
AnGL21_01533350-443
511-692
AnGL21_0325798-194
Sunxiuqinia elliptica, AnGL22 AnGL22_00158343-433
510-672
AnGL22_0029566-172
AnGL22_01221151-251
AnGL22_03263456-550
617-788
Paraclostridium benzoelyticum, AnGL27 AnGL27_0082241-147
AnGL27_00966277-368
436-556
AnGL27_02638277-369
436-557
AnGL27_02857379-470
552-675
FD-MS-7-8, AnGL9 AnGL9_00835355-446
515-701
FD-YE-37-9-3, AnGL29 AnGL29_00033296-390
458-597
AnGL29_00863358-449
520-643
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00693346-434
513-678
PaGL#35_0378453-158
Syntrophomonas erecta, GB-438 Ga0610585_003910-59
Ga0610585_0039218-109
Ga0610585_00899138-237
Ga0610585_01229298-390
453-549
Ga0610585_0148747-148
Ga0610585_0148842-149
Ga0610585_02276136-227
307-434
Variovorax sp., EBFNA2 PaGL#33_0017551-157
PaGL#33_04688298-391
468-600
Variovorax paradoxus, 2u118 PaGL#32_0015251-157
PaGL#32_01426298-391
469-600
Maridesulfovibrio salexigens, AnGL23 AnGL23_01663360-454
523-697
AnGL23_01733287-376
447-643
AnGL23_03142368-464
671-771
Exiguobacterium mexicanum, AnGL24 AnGL24_00128146-239
AnGL24_00629340-434
502-626
AnGL24_0208989-185
Clostridium subterminale, CB-LS10-1 AnGL53_0014741-150
AnGL53_01569563-687
AnGL53_01607147-245
AnGL53_01638282-377
443-563
AnGL53_01744352-447
513-644
Priestia megaterium, 10L1 PaGL#57_0317542-149
PaGL#57_0317645-146
PaGL#57_0325141-140
PaGL#57_03953139-228
309-434
PaGL#57_0466990-188
PaGL#57_0653111-106
172-296
Variovorax paradoxus, SPNA7 PaGL#43_0015351-157
PaGL#43_01425298-391
469-600
Methanospirillum lacunae, Ki8-1 MLKi8_01977328-420
484-590
MLKi8_03101346-440
508-631
Fictibacillus phosphorivorans, TY7 PaGL#38_0285543-148
PaGL#38_0386392-187
PaGL#38_0404415-98
174-263
PaGL#38_04514123-222
PaGL#38_04739168-261
Methanospirillum hungatei, GP1 MhGP1_02107328-419
484-590
MhGP1_03009346-440
507-631
Methanospirillum stamsii, Pt1 MLKi8_00214346-440
507-631
MLKi8_00840289-383
446-543
MLKi8_02661328-419
484-590
Syntrophomonas wolfei, saponavida Swsap_00345301-393
Swsap_00896369-459
531-677
Swsap_0215641-150
Swsap_0312841-104
Bacillus subtilis, 30VD-1 PaGL#66_0080116-101
174-263
PaGL#66_0197943-150
PaGL#66_0198045-146
PaGL#66_0262943-140
Peribacillus frigoritolerans, 30N-5 PaGL#67_0034790-188
PaGL#67_0057117-99
176-263
PaGL#67_0235242-150
PaGL#67_0235347-147
Sphingomonas sp., CR2A3 PaGL#62_02362286-379
454-586
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0017934-140
AnGL54_00344277-368
436-557
AnGL54_01076372-465
535-667
AnGL54_01363379-470
550-676
Niallia taxi, AG-1 PaGL#37_0255646-147
PaGL#37_0255742-150
Methanospirillum.hungatei GP1, MhGP1 8064047441:MhGP1_00796328-419
484-590
8064049828:MhGP1_03137346-440
507-631
Methanospirillum.hungatei.JF-1, MhunJF1 Mhun_01340330-421
486-592
Ga0065338_112295:Mhun_02290346-440
507-631
Ga0065338_113142:Mhun_03139283-377
440-537
MPOB, Sfum 639703258:Sfum_02561362-459
527-711
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1066:Spalm_01019104-194
Ga0128340_11824:Spalm_0233347-148
Ga0128340_11825:Spalm_0233433-99
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0147447-148
Swol_0147542-149
Ga0065332_111642:Swol_01610137-227
307-432
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13878:Szehn_0218947-148
Szehn_0219042-150
Szehn_00683314-406
Szehn_00692386-476
558-681
Ga0124040_109139:Szehn_00710368-458
530-676
Syntrophus aciditrophicus, SB 637858413:SYN_00102438-531
599-717
637860181:SYN_0175442-149
Syntrophus gentianae, DSM8423 Ga0074853_12929:Sgen_02826362-452
523-687
Ga0074853_103199:Sgen_0062342-149
Sgen_00397438-531
599-717
Mucilaginibacter gossypii, cycad 4 PaGL#42_0224252-158
PaGL#42_04628344-434
513-678
Ruminococcus callidus, ATCC 27760 Rcal_00702469-564
630-758
Rcal_02850546-665
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