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PaGL#36_01830 Locus tags: • Sequence Length: 1018

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014

50501001001501502002002502503003003503504004004504505005005505506006006506507007007507508008008508509009009509501000100010501050
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PaGL#36_01827 PaGL#36_01828 PaGL#36_01829 PaGL#36_01830 PaGL#36_01834 PaGL#36_01835 
    [PF09334]_[PF13603]_[PF08264]

    [70:PF09334]_[308:PF13603]_[815:PF08264]

    [70:IPR015413]_[158:IPR002302]_[273:IPR002302]_[302:IPR002302]_[308:IPR025709]_[310:IPR009008]_[606:IPR002302]_[654:IPR002302]_[687:IPR002302]_[783:IPR009080]_[815:IPR013155]

Looking for similar signatures in the working genomes

PF09334:tRNA-synt_1g. tRNA synthetases class I (M)

Found 131 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517434.1:LOMAGDGF_0105634-180
WP_003516738.1:LOMAGDGF_02839147-361
Clostridium acetobutylicum, DSM 1731 WP_010963965.1:FHOCHPCF_0069039-182
WP_010966273.1:FHOCHPCF_030387-151
154-362
Acetivibrio alkalicellulosi, DSM 17461 2510060056:NJMEOJLD_003142-391
2510062160:NJMEOJLD_0236134-182
2510063128:NJMEOJLD_033156-150
151-361
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943097.1:NEIHKHHH_007463-389
WP_036947320.1:NEIHKHHH_0225933-182
WP_036936330.1:NEIHKHHH_04072147-361
Ruminococcus albus_7, DSM 20455 WP_013499669.1:HCIAFFOI_0318840-150
WP_013483668.1:HCIAFFOI_0379722-257
311-472
WP_013496937.1:HCIAFFOI_001956-151
155-362
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00062148-360
Ga0065332_111706:GJLLLGJL_0167440-181
Paenibacillus guangzhouensis, KCTC 33171 WP_152392109.1:KDFAKKPF_0055046-178
WP_152394086.1:KDFAKKPF_02820150-363
WP_152396080.1:KDFAKKPF_052114-394
Clostridium acetobutylicum, ATCC 824 WP_010963965.1:OJAMHIDJ_0069139-182
WP_010966273.1:OJAMHIDJ_030477-151
154-362
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697252.1:PROKKA_00228147-361
WP_137698730.1:PROKKA_0376039-184
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0028541-184
OINOEOOJ_02168148-360
FD_25_22, AnGL7 AnGL7_015337-396
FD_25_27, AnGL8 AnGL8_022997-396
FD_MS_7_1, AnGL28 AnGL28_0012540-182
AnGL28_032487-152
158-365
FD_SO4_25_1_F22, AnGL30 AnGL30_011338-397
FD_SO4_37_1, AnGL2 AnGL2_023787-152
158-365
AnGL2_0280440-182
FD_YE_25_21, AnGL21 AnGL21_009128-396
FD_YE_37_3, AnGL26 AnGL26_019987-395
FD_YE_37_8_2, AnGL3 AnGL3_029997-396
FD_YE_37_9_2, AnGL4 AnGL4_0036438-183
AnGL4_01770147-363
Syntrophus buswellii, Sbus Sbus_0029040-183
Sbus_01367137-359
Syntrophomonas curvata, Scurva Scurva_00061152-360
Scurva_0217440-181
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0072041-184
Sespor_01404148-360
Syntrophomonas wolfei methylbutyratica, Swm Swm_00057148-360
Swm_0187241-181
Terrisporobacter hibernicus, AnGL54 AnGL54_033516-361
FD-25-21, AnGL21 AnGL21_010257-396
Sunxiuqinia elliptica, AnGL22 AnGL22_019957-395
Paraclostridium benzoelyticum, AnGL27 AnGL27_00827148-361
AnGL27_0130940-181
FD-MS-7-8, AnGL9 AnGL9_027907-365
FD-YE-37-9-3, AnGL29 AnGL29_0108938-183
AnGL29_02495147-363
Methylobacterium radiotolerans, GTSA1 PaGL#34_0176214-146
156-371
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0059610-408
PaGL#35_0132637-145
Syntrophomonas erecta, GB-438 Ga0610585_0028541-184
Ga0610585_02168148-360
Variovorax sp., EBFNA2 PaGL#33_0046837-171
PaGL#33_013737-410
Variovorax paradoxus, 2u118 PaGL#32_0046037-171
PaGL#32_041677-410
Dietzia cinnamea, 55 PaGL#56_021915-411
PaGL#56_0332879-185
Maridesulfovibrio salexigens, AnGL23 AnGL23_010324-146
147-360
AnGL23_0259737-183
Exiguobacterium mexicanum, AnGL24 AnGL24_0204738-171
AnGL24_03040138-361
Clostridium subterminale, CB-LS10-1 AnGL53_001506-150
153-361
AnGL53_0259939-183
AnGL53_029792-391
Priestia megaterium, 10L1 PaGL#57_022048-373
PaGL#57_0270438-170
Variovorax paradoxus, SPNA7 PaGL#43_0043337-171
PaGL#43_0432324-427
Methanospirillum lacunae, Ki8-1 MLKi8_01642562-648
MLKi8_012076-392
Geodermatophilus sp., RDM14 PaGL#36_008056-412
PaGL#36_0183070-153
Methylorubrum populi, CTY4 PaGL#39_0151050-185
PaGL#39_0407710-155
156-369
Fictibacillus phosphorivorans, TY7 PaGL#38_004256-152
154-361
PaGL#38_0363438-170
Methanospirillum hungatei, GP1 MhGP1_013776-392
Methanospirillum stamsii, Pt1 MLKi8_01563535-647
MLKi8_016586-392
Syntrophomonas wolfei, saponavida Swsap_01239148-360
Swsap_0202439-180
Bacillus subtilis, 30VD-1 PaGL#66_001458-374
PaGL#66_0130738-170
Peribacillus frigoritolerans, 30N-5 PaGL#67_002328-365
PaGL#67_0091038-170
Micromonospora inositola, Utrum1 PaGL#61_009274-414
PaGL#61_0533965-167
Sphingomonas sp., CR2A3 PaGL#62_009258-366
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001816-361
Niallia taxi, AG-1 PaGL#37_000467-373
PaGL#37_0311338-170
Methanospirillum.hungatei GP1, MhGP1 8064048187:MhGP1_015266-392
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11379:Mhun_0037732-418
Ga0065338_11487:Mhun_00485561-647
MPOB, Sfum 639700909:Sfum_00167181-394
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10178:Spalm_0007539-183
Spalm_015487-152
153-360
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00062148-360
Ga0065332_111706:Swol_0167440-181
Syntrophomonas zehnderi, OL-4 Szehn Szehn_004136-152
153-360
Ga0124040_1318:Szehn_0183540-181
Syntrophus aciditrophicus, SB 637858480:SYN_0016340-182
637860138:SYN_017145-148
148-359
Syntrophus gentianae, DSM8423 Ga0074853_12732:Sgen_0273540-182
Ga0074853_10880:Sgen_01387136-359
Mucilaginibacter gossypii, cycad 4 PaGL#42_0429035-433
PaGL#42_0592237-156
Ruminococcus callidus, ATCC 27760 Rcal_002875-152
156-361
Rcal_0255240-183

PF13603:tRNA-synt_1_2. Leucyl-tRNA synthetase, editing domain

Found 59 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517434.1:LOMAGDGF_01056218-405
Clostridium acetobutylicum, DSM 1731 WP_010963965.1:FHOCHPCF_00690218-396
Acetivibrio alkalicellulosi, DSM 17461 2510062160:NJMEOJLD_02361218-405
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947320.1:NEIHKHHH_02259217-404
Ruminococcus albus_7, DSM 20455 WP_013499669.1:HCIAFFOI_03188220-413
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111706:GJLLLGJL_01674220-406
Paenibacillus guangzhouensis, KCTC 33171 WP_152392109.1:KDFAKKPF_00550226-407
Clostridium acetobutylicum, ATCC 824 WP_010963965.1:OJAMHIDJ_00691218-396
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698730.1:PROKKA_03760218-400
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00285221-408
FD_25_22, AnGL7 AnGL7_01047220-402
FD_25_27, AnGL8 AnGL8_01720220-404
FD_MS_7_1, AnGL28 AnGL28_00125220-413
FD_SO4_25_1_F22, AnGL30 AnGL30_01075275-443
FD_SO4_37_1, AnGL2 AnGL2_02804220-413
FD_YE_25_21, AnGL21 AnGL21_02403220-403
FD_YE_37_3, AnGL26 AnGL26_02701255-451
FD_YE_37_8_2, AnGL3 AnGL3_02591275-462
FD_YE_37_9_2, AnGL4 AnGL4_00364219-400
Syntrophus buswellii, Sbus Sbus_00290220-407
Syntrophomonas curvata, Scurva Scurva_02174220-407
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00720221-408
Syntrophomonas wolfei methylbutyratica, Swm Swm_01872221-407
Terrisporobacter hibernicus, AnGL54 AnGL54_02432220-391
FD-25-21, AnGL21 AnGL21_01508220-402
Sunxiuqinia elliptica, AnGL22 AnGL22_02698255-451
Paraclostridium benzoelyticum, AnGL27 AnGL27_01309220-391
FD-MS-7-8, AnGL9 AnGL9_00561220-413
FD-YE-37-9-3, AnGL29 AnGL29_01089219-400
Methylobacterium radiotolerans, GTSA1 PaGL#34_04568228-418
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01326276-477
Syntrophomonas erecta, GB-438 Ga0610585_00285221-408
Variovorax sp., EBFNA2 PaGL#33_00468221-415
Variovorax paradoxus, 2u118 PaGL#32_00460221-415
Dietzia cinnamea, 55 PaGL#56_03328334-384
421-550
Maridesulfovibrio salexigens, AnGL23 AnGL23_02597222-408
Exiguobacterium mexicanum, AnGL24 AnGL24_02047219-400
Clostridium subterminale, CB-LS10-1 AnGL53_02599218-396
Priestia megaterium, 10L1 PaGL#57_02704218-398
Variovorax paradoxus, SPNA7 PaGL#43_00433221-415
Geodermatophilus sp., RDM14 PaGL#36_01830308-506
Methylorubrum populi, CTY4 PaGL#39_01510234-427
Fictibacillus phosphorivorans, TY7 PaGL#38_03634218-398
Syntrophomonas wolfei, saponavida Swsap_02024219-406
Bacillus subtilis, 30VD-1 PaGL#66_01307218-399
Peribacillus frigoritolerans, 30N-5 PaGL#67_00910218-399
Micromonospora inositola, Utrum1 PaGL#61_05339293-494
Sphingomonas sp., CR2A3 PaGL#62_02680219-403
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03236220-391
Niallia taxi, AG-1 PaGL#37_03113218-399
MPOB, Sfum 639702851:Sfum_02146220-409
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10178:Spalm_00075219-406
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111706:Swol_01674220-406
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1318:Szehn_01835220-407
Syntrophus aciditrophicus, SB 637858480:SYN_00163220-407
Syntrophus gentianae, DSM8423 Ga0074853_12732:Sgen_02735220-407
Mucilaginibacter gossypii, cycad 4 PaGL#42_05922276-465
Ruminococcus callidus, ATCC 27760 Rcal_02552220-399

PF08264:Anticodon_1. Anticodon-binding domain of tRNA ligase

Found 203 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517434.1:LOMAGDGF_01056659-787
WP_003516364.1:LOMAGDGF_01480684-843
WP_003519337.1:LOMAGDGF_01964608-755
Clostridium acetobutylicum, DSM 1731 WP_010963965.1:FHOCHPCF_00690657-774
WP_010965695.1:FHOCHPCF_02437609-758
WP_010966319.1:FHOCHPCF_03084708-858
Acetivibrio alkalicellulosi, DSM 17461 2510061201:NJMEOJLD_01429677-829
2510062160:NJMEOJLD_02361659-787
2510062778:NJMEOJLD_02973606-753
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938153.1:NEIHKHHH_01949684-842
WP_036947320.1:NEIHKHHH_02259658-785
WP_036941810.1:NEIHKHHH_02331609-756
WP_036936330.1:NEIHKHHH_04072392-522
Ruminococcus albus_7, DSM 20455 WP_013499669.1:HCIAFFOI_03188660-775
WP_013496937.1:HCIAFFOI_00195387-477
WP_013497687.1:HCIAFFOI_01023628-776
WP_013497688.1:HCIAFFOI_01024690-835
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00062382-467
Ga0065332_111002:GJLLLGJL_00986680-831
Ga0065332_111706:GJLLLGJL_01674665-781
Ga0065332_111756:GJLLLGJL_01723608-752
Paenibacillus guangzhouensis, KCTC 33171 WP_152391705.1:KDFAKKPF_00101616-764
WP_152392109.1:KDFAKKPF_00550665-774
WP_152392217.1:KDFAKKPF_00670675-822
Clostridium acetobutylicum, ATCC 824 WP_010963965.1:OJAMHIDJ_00691657-774
WP_010965695.1:OJAMHIDJ_02447609-758
WP_010966319.1:OJAMHIDJ_03093708-858
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698494.1:PROKKA_01249609-755
WP_137696255.1:PROKKA_01770684-842
WP_137698730.1:PROKKA_03760657-775
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00251608-751
OINOEOOJ_00285664-787
OINOEOOJ_00571680-832
OINOEOOJ_02168387-487
FD_25_22, AnGL7 AnGL7_00459674-824
AnGL7_01047697-822
AnGL7_03271691-848
FD_25_27, AnGL8 AnGL8_01720697-817
AnGL8_02587690-846
AnGL8_02816673-826
FD_MS_7_1, AnGL28 AnGL28_00125675-801
AnGL28_02183607-756
AnGL28_02572679-827
FD_SO4_25_1_F22, AnGL30 AnGL30_00376613-757
AnGL30_01075775-886
AnGL30_01517773-925
FD_SO4_37_1, AnGL2 AnGL2_01312607-756
AnGL2_01701679-827
AnGL2_02804675-801
FD_YE_25_21, AnGL21 AnGL21_00351678-830
AnGL21_02403698-820
AnGL21_02576690-846
FD_YE_37_3, AnGL26 AnGL26_01357613-756
AnGL26_01783775-927
AnGL26_02701729-848
FD_YE_37_8_2, AnGL3 AnGL3_01525613-751
AnGL3_02591777-889
AnGL3_03265781-934
FD_YE_37_9_2, AnGL4 AnGL4_00364651-767
AnGL4_00570606-754
AnGL4_02308678-829
Syntrophus buswellii, Sbus Sbus_00290697-824
Sbus_00750609-758
Sbus_01429686-840
Syntrophomonas curvata, Scurva Scurva_00061388-486
Scurva_01748680-837
Scurva_02174663-785
Scurva_02317608-756
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00433680-832
Sespor_00720664-787
Sespor_00754608-751
Sespor_01404387-487
Syntrophomonas wolfei methylbutyratica, Swm Swm_01083680-831
Swm_01872666-781
Swm_01944608-752
Terrisporobacter hibernicus, AnGL54 AnGL54_02173680-828
AnGL54_02432643-765
AnGL54_03532611-760
FD-25-21, AnGL21 AnGL21_01508697-822
AnGL21_02161674-824
AnGL21_02989691-848
Sunxiuqinia elliptica, AnGL22 AnGL22_01359613-756
AnGL22_01780775-927
AnGL22_02698729-848
Paraclostridium benzoelyticum, AnGL27 AnGL27_00979611-760
AnGL27_01309643-765
AnGL27_03263678-826
FD-MS-7-8, AnGL9 AnGL9_00561675-801
AnGL9_01235695-843
AnGL9_01738607-756
FD-YE-37-9-3, AnGL29 AnGL29_01089651-767
AnGL29_01295606-754
AnGL29_03033678-829
Methylobacterium radiotolerans, GTSA1 PaGL#34_02034736-886
PaGL#34_04568705-827
PaGL#34_05876629-777
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00088766-916
PaGL#35_01326794-910
PaGL#35_05625625-769
Syntrophomonas erecta, GB-438 Ga0610585_00251608-751
Ga0610585_00285664-787
Ga0610585_00571680-832
Ga0610585_02168387-487
Variovorax sp., EBFNA2 PaGL#33_00468713-838
PaGL#33_04869678-828
PaGL#33_04906711-863
Variovorax paradoxus, 2u118 PaGL#32_00460713-838
PaGL#32_01236711-864
PaGL#32_01268687-835
Dietzia cinnamea, 55 PaGL#56_01092599-749
PaGL#56_01265723-867
PaGL#56_03328874-995
Maridesulfovibrio salexigens, AnGL23 AnGL23_01302699-850
AnGL23_02597671-793
AnGL23_03006608-755
Exiguobacterium mexicanum, AnGL24 AnGL24_00990610-758
AnGL24_01201673-828
AnGL24_02047651-762
Clostridium subterminale, CB-LS10-1 AnGL53_00150382-537
AnGL53_00164673-823
AnGL53_00867609-758
AnGL53_02599660-775
Priestia megaterium, 10L1 PaGL#57_02704651-764
PaGL#57_02874607-755
PaGL#57_03288676-830
PaGL#57_04719674-818
Variovorax paradoxus, SPNA7 PaGL#43_00433713-838
PaGL#43_01228711-864
PaGL#43_01263681-829
Methanospirillum lacunae, Ki8-1 MLKi8_01642676-809
MLKi8_01151604-743
MLKi8_02818685-832
Geodermatophilus sp., RDM14 PaGL#36_01458669-811
PaGL#36_01830815-931
PaGL#36_01951699-844
Methylorubrum populi, CTY4 PaGL#39_01510717-841
PaGL#39_02063741-891
PaGL#39_04623630-780
Fictibacillus phosphorivorans, TY7 PaGL#38_02206677-830
PaGL#38_03443609-757
PaGL#38_03634658-767
Methanospirillum hungatei, GP1 MhGP1_01280676-802
MhGP1_01506605-745
MhGP1_02391686-837
Methanospirillum stamsii, Pt1 MLKi8_01563676-802
MLKi8_01854605-745
MLKi8_03289686-837
Syntrophomonas wolfei, saponavida Swsap_01239385-471
Swsap_01987608-754
Swsap_02024661-784
Swsap_02458680-833
Bacillus subtilis, 30VD-1 PaGL#66_01307654-766
PaGL#66_01534607-756
PaGL#66_02587676-829
Peribacillus frigoritolerans, 30N-5 PaGL#67_00910654-766
PaGL#67_01969609-755
PaGL#67_04052676-831
Micromonospora inositola, Utrum1 PaGL#61_05339799-910
PaGL#61_05815704-843
PaGL#61_05826608-751
PaGL#61_06255675-820
Sphingomonas sp., CR2A3 PaGL#62_00883660-806
PaGL#62_02680682-804
PaGL#62_02954785-938
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00362611-760
AnGL54_02976680-828
AnGL54_03236643-765
Niallia taxi, AG-1 PaGL#37_00223673-816
PaGL#37_01335675-829
PaGL#37_02871608-754
PaGL#37_03113657-769
Methanospirillum.hungatei GP1, MhGP1 8064047152:MhGP1_00512686-837
8064048056:MhGP1_01396605-745
8064048286:MhGP1_01623676-802
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11167:Mhun_00167605-745
Ga0065338_11487:Mhun_00485676-803
Mhun_01495686-838
MPOB, Sfum 639700878:Sfum_00134684-839
639700947:Sfum_00206609-755
639702851:Sfum_02146668-792
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10178:Spalm_00075662-785
Ga0128340_11175:Spalm_01760680-837
Ga0128340_101123:Spalm_00120383-530
Spalm_01548390-473
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00062382-467
Ga0065332_111002:Swol_00986680-831
Ga0065332_111706:Swol_01674665-781
Ga0065332_111756:Swol_01723608-752
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1318:Szehn_01835663-784
Szehn_01873607-753
Ga0124040_126220:Szehn_01452680-831
Syntrophus aciditrophicus, SB 637858480:SYN_00163697-823
637859829:SYN_01420686-842
637860287:SYN_01852609-759
Syntrophus gentianae, DSM8423 Ga0074853_1114:Sgen_01663686-840
Ga0074853_12226:Sgen_02514609-758
Ga0074853_12732:Sgen_02735697-825
Mucilaginibacter gossypii, cycad 4 PaGL#42_00242676-820
PaGL#42_04447763-916
PaGL#42_05922829-944
Ruminococcus callidus, ATCC 27760 Rcal_00870605-752
Rcal_01200703-862
Rcal_02552652-769
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