SMPP Home

PaGL#36_02274 Locus tags: • Sequence Length: 180

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014

5050100100150150200200
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#36_02269 PaGL#36_02270 PaGL#36_02272 PaGL#36_02275 PaGL#36_02278 
    [PF13719]_[PF00498]

    [2:PF13719]_[91:PF00498]

    [2:IPR026870]_[60:IPR008984]_[68:IPR000253]_[89:IPR000253]_[90:IPR000253]_[91:IPR000253]

Looking for similar signatures in the working genomes

PF13719:Zn_ribbon_5. zinc-ribbon domain

Found 73 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515320.1:LOMAGDGF_003801-23
Clostridium acetobutylicum, DSM 1731 WP_010964356.1:FHOCHPCF_010912-24
WP_010966509.1:FHOCHPCF_032882-24
Pseudobacteroides cellulosolvens, DSM 2933 WP_160317737.1:NEIHKHHH_03400128-148
WP_036938807.1:NEIHKHHH_0376095-117
Ruminococcus albus_7, DSM 20455 WP_013499697.1:HCIAFFOI_032172-23
WP_013483308.1:HCIAFFOI_03397167-190
WP_013483476.1:HCIAFFOI_035932-22
WP_013483529.1:HCIAFFOI_036523-26
WP_013483923.1:HCIAFFOI_040781-23
WP_028504505.1:HCIAFFOI_00026247-267
WP_013498666.1:HCIAFFOI_02074391-413
WP_013498743.1:HCIAFFOI_02162146-168
WP_013498955.1:HCIAFFOI_024081-24
Clostridium acetobutylicum, ATCC 824 WP_010964356.1:OJAMHIDJ_010942-24
WP_010966509.1:OJAMHIDJ_032972-24
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0088420-41
FD_25_22, AnGL7 AnGL7_0146261-162
FD_YE_37_8_2, AnGL3 AnGL3_002292-24
AnGL3_008442-92
FD_YE_37_9_2, AnGL4 AnGL4_010561-23
Syntrophus buswellii, Sbus Sbus_021590-36
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0012620-41
Terrisporobacter hibernicus, AnGL54 AnGL54_013179-32
AnGL54_02767298-320
AnGL54_037948-31
FD-25-21, AnGL21 AnGL21_010933-104
Paraclostridium benzoelyticum, AnGL27 AnGL27_005668-31
FD-YE-37-9-3, AnGL29 AnGL29_017811-23
Methylobacterium radiotolerans, GTSA1 PaGL#34_018932-104
PaGL#34_032320-36
Syntrophomonas erecta, GB-438 Ga0610585_0088420-41
Variovorax sp., EBFNA2 PaGL#33_0048736-145
PaGL#33_008732-39
Variovorax paradoxus, 2u118 PaGL#32_0047632-154
PaGL#32_008912-39
Maridesulfovibrio salexigens, AnGL23 AnGL23_019850-36
AnGL23_034310-36
Priestia megaterium, 10L1 PaGL#57_042761-23
PaGL#57_063382-25
Variovorax paradoxus, SPNA7 PaGL#43_0045244-166
PaGL#43_008822-39
Methanospirillum lacunae, Ki8-1 MLKi8_027391-24
Geodermatophilus sp., RDM14 PaGL#36_022742-24
Methylorubrum populi, CTY4 PaGL#39_023002-95
PaGL#39_025710-36
PaGL#39_031192-98
Methanospirillum hungatei, GP1 MhGP1_01708296-317
Syntrophomonas wolfei, saponavida Swsap_01193345-367
Swsap_011946-28
Swsap_011981-24
Bacillus subtilis, 30VD-1 PaGL#66_009111-24
PaGL#66_03563300-322
Sphingomonas sp., CR2A3 PaGL#62_023780-36
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_006248-31
AnGL54_020459-32
AnGL54_03570298-320
Methanospirillum.hungatei GP1, MhGP1 8064047846:MhGP1_01195296-317
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112898:Mhun_028952-23
Ga0065338_113019:Mhun_030171-23
Ga0065338_113023:Mhun_030214-27
241-265
Ga0065338_113024:Mhun_0302213-36
MPOB, Sfum 639702191:Sfum_014690-36
639702530:Sfum_018110-33
639704791:Sfum_041150-35
Syntrophus aciditrophicus, SB 637859028:SYN_006750-36
Syntrophus gentianae, DSM8423 Ga0074853_12239:Sgen_025270-36
Ruminococcus callidus, ATCC 27760 Rcal_002592-24
Rcal_00330370-392
Rcal_008361-24
Rcal_0243597-118
Rcal_024841-23

PF00498:FHA. FHA domain

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516895.1:LOMAGDGF_0061671-138
WP_003517043.1:LOMAGDGF_00955444-510
WP_003516581.1:LOMAGDGF_0163727-78
123-187
Clostridium acetobutylicum, DSM 1731 WP_010963365.1:FHOCHPCF_00045392-458
WP_010963368.1:FHOCHPCF_00048130-194
WP_010963728.1:FHOCHPCF_00450440-506
WP_010963730.1:FHOCHPCF_00452115-177
WP_010963826.1:FHOCHPCF_0054986-151
Acetivibrio alkalicellulosi, DSM 17461 2510062244:NJMEOJLD_02444409-475
2510062810:NJMEOJLD_0300389-156
2510063289:NJMEOJLD_0347687-154
2510063290:NJMEOJLD_03477145-220
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946226.1:NEIHKHHH_00333450-516
WP_036941805.1:NEIHKHHH_02335165-231
WP_036944559.1:NEIHKHHH_0281828-87
123-187
WP_050753464.1:NEIHKHHH_02939210-275
WP_036943640.1:NEIHKHHH_0533271-137
WP_036940127.1:NEIHKHHH_05809284-350
WP_050753959.1:NEIHKHHH_05824120-197
WP_036940159.1:NEIHKHHH_0582583-150
Paenibacillus guangzhouensis, KCTC 33171 WP_193726546.1:KDFAKKPF_03847464-530
Clostridium acetobutylicum, ATCC 824 WP_010963365.1:OJAMHIDJ_00045392-458
WP_010963368.1:OJAMHIDJ_00048130-194
WP_010963728.1:OJAMHIDJ_00451440-506
WP_010963730.1:OJAMHIDJ_00453115-177
WP_010963826.1:OJAMHIDJ_0055086-151
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698187.1:PROKKA_0086875-138
WP_137697946.1:PROKKA_02414455-521
FD_SO4_25_1_F22, AnGL30 AnGL30_0222893-169
FD_YE_25_21, AnGL21 AnGL21_04379413-471
526-592
AnGL21_04383121-193
Syntrophus buswellii, Sbus Sbus_0004622-86
Sbus_0142723-86
FD-MS-7-8, AnGL9 AnGL9_0009922-86
Variovorax sp., EBFNA2 PaGL#33_0026326-95
PaGL#33_0058427-94
PaGL#33_02909192-237
PaGL#33_0595822-86
Variovorax paradoxus, 2u118 PaGL#32_0023026-95
PaGL#32_0058227-93
PaGL#32_02580213-258
PaGL#32_0516822-87
Dietzia cinnamea, 55 PaGL#56_00041219-281
PaGL#56_0142469-132
Clostridium subterminale, CB-LS10-1 AnGL53_0314471-135
Priestia megaterium, 10L1 PaGL#57_0441326-95
Variovorax paradoxus, SPNA7 PaGL#43_0022526-95
PaGL#43_0055727-93
PaGL#43_02834213-258
PaGL#43_0538322-87
Methanospirillum lacunae, Ki8-1 MLKi8_00276193-271
MLKi8_0189089-154
MLKi8_02141162-241
Geodermatophilus sp., RDM14 PaGL#36_00156195-258
PaGL#36_0227491-154
PaGL#36_03371227-310
Fictibacillus phosphorivorans, TY7 PaGL#38_0399431-98
Methanospirillum hungatei, GP1 MhGP1_01930189-241
MhGP1_02358165-241
MhGP1_0310289-155
Methanospirillum stamsii, Pt1 MLKi8_00030183-241
MLKi8_00287104-170
MLKi8_01791168-245
Peribacillus frigoritolerans, 30N-5 PaGL#67_0129730-98
Micromonospora inositola, Utrum1 PaGL#61_0047224-88
PaGL#61_0392368-131
PaGL#61_0601030-94
Methanospirillum.hungatei GP1, MhGP1 8064047185:MhGP1_00545165-241
8064047619:MhGP1_00973189-241
8064049735:MhGP1_0304489-155
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11211:Mhun_00209185-248
Ga0065338_111169:Mhun_01169169-247
Ga0065338_112453:Mhun_0245189-155
MPOB, Sfum 639701315:Sfum_0057521-86
639703307:Sfum_0261621-86
639704206:Sfum_0351824-87
Syntrophus gentianae, DSM8423 Sgen_0166123-86
Ga0074853_13113:Sgen_0288222-86
Ruminococcus callidus, ATCC 27760 Rcal_0113674-138
Search by locus tag: Search
↑ Top




v4.1 @copyright 2026 UCLA