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KDFAKKPF_00794 Locus tags: • Sequence Length: 484

Paenibacillus guangzhouensis, KCTC 33171 GCF_009363075.1

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KDFAKKPF_00790 KDFAKKPF_00791 KDFAKKPF_00793 KDFAKKPF_00794 KDFAKKPF_00797 KDFAKKPF_00799 
    [PF01029]_[PF17125]_[PF01189]

    [9:PF01029]_[159:PF17125]_[253:PF01189]

    [9:IPR006027]_[9:IPR035926]_[147:IPR029063]_[159:IPR031341]_[176:IPR001678]_[234:IPR023267]_[253:IPR001678]_[263:IPR023267]_[331:IPR023267]_[381:IPR023267]_[440:IPR023267]

Looking for similar signatures in the working genomes

PF01029:NusB. NusB family

Found 107 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518757.1:LOMAGDGF_014344-130
WP_003517649.1:LOMAGDGF_017218-133
Clostridium acetobutylicum, DSM 1731 WP_010965032.1:FHOCHPCF_017682-127
WP_010965384.1:FHOCHPCF_021244-129
Acetivibrio alkalicellulosi, DSM 17461 2510061828:NJMEOJLD_020428-132
2510064172:NJMEOJLD_043414-130
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946929.1:NEIHKHHH_020524-130
WP_036939176.1:NEIHKHHH_034465-129
Ruminococcus albus_7, DSM 20455 WP_013498475.1:HCIAFFOI_018743-127
WP_013498624.1:HCIAFFOI_0203021-130
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0057511-109
GJLLLGJL_0126910-135
Paenibacillus guangzhouensis, KCTC 33171 WP_152392318.1:KDFAKKPF_007949-134
WP_152394055.1:KDFAKKPF_027875-140
Clostridium acetobutylicum, ATCC 824 WP_010965032.1:OJAMHIDJ_017752-127
WP_010965384.1:OJAMHIDJ_021324-129
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695846.1:PROKKA_022204-130
WP_137698670.1:PROKKA_023165-129
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0063911-135
OINOEOOJ_013343-129
FD_25_22, AnGL7 AnGL7_000940-123
AnGL7_025149-134
FD_25_27, AnGL8 AnGL8_012560-123
AnGL8_025496-146
FD_MS_7_1, AnGL28 AnGL28_007075-120
AnGL28_0115510-135
FD_SO4_25_1_F22, AnGL30 AnGL30_01729194-296
FD_SO4_37_1, AnGL2 AnGL2_0028510-135
AnGL2_033865-120
FD_YE_25_21, AnGL21 AnGL21_0067810-149
AnGL21_031100-123
FD_YE_37_3, AnGL26 AnGL26_03335203-296
FD_YE_37_8_2, AnGL3 AnGL3_00417196-296
FD_YE_37_9_2, AnGL4 AnGL4_000944-131
AnGL4_033094-129
Syntrophus buswellii, Sbus Sbus_002895-129
Sbus_010014-128
Syntrophomonas curvata, Scurva Scurva_010343-128
Scurva_0165512-136
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0036511-135
Sespor_023043-129
Syntrophomonas wolfei methylbutyratica, Swm Swm_0061113-112
Swm_0143610-135
Terrisporobacter hibernicus, AnGL54 AnGL54_0211718-174
AnGL54_021480-125
FD-25-21, AnGL21 AnGL21_001479-134
AnGL21_025260-123
Sunxiuqinia elliptica, AnGL22 AnGL22_03331203-296
Paraclostridium benzoelyticum, AnGL27 AnGL27_032057-162
AnGL27_032410-125
FD-MS-7-8, AnGL9 AnGL9_001885-121
AnGL9_0141110-135
FD-YE-37-9-3, AnGL29 AnGL29_005674-129
AnGL29_008194-131
Methylobacterium radiotolerans, GTSA1 PaGL#34_0120014-121
PaGL#34_0431027-161
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05198186-296
Syntrophomonas erecta, GB-438 Ga0610585_0063911-135
Ga0610585_013343-129
Variovorax sp., EBFNA2 PaGL#33_0265533-156
Variovorax paradoxus, 2u118 PaGL#32_0320540-163
Dietzia cinnamea, 55 PaGL#56_016435-114
PaGL#56_0165914-143
Maridesulfovibrio salexigens, AnGL23 AnGL23_0259612-142
AnGL23_0311026-130
Exiguobacterium mexicanum, AnGL24 AnGL24_012220-125
AnGL24_018393-126
Clostridium subterminale, CB-LS10-1 AnGL53_011093-126
AnGL53_014594-132
Priestia megaterium, 10L1 PaGL#57_030913-125
PaGL#57_033124-128
Variovorax paradoxus, SPNA7 PaGL#43_0325840-163
Geodermatophilus sp., RDM14 PaGL#36_020944-129
PaGL#36_021308-116
Methylorubrum populi, CTY4 PaGL#39_0039520-131
PaGL#39_0286922-155
Fictibacillus phosphorivorans, TY7 PaGL#38_022293-128
PaGL#38_029435-125
Syntrophomonas wolfei, saponavida Swsap_004053-129
Swsap_0265321-146
Bacillus subtilis, 30VD-1 PaGL#66_018593-125
PaGL#66_025554-128
Peribacillus frigoritolerans, 30N-5 PaGL#67_022614-124
PaGL#67_040287-130
Micromonospora inositola, Utrum1 PaGL#61_0247012-139
PaGL#61_0249078-198
Sphingomonas sp., CR2A3 PaGL#62_0189914-149
PaGL#62_0270922-118
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0292018-174
AnGL54_029510-125
Niallia taxi, AG-1 PaGL#37_013596-130
PaGL#37_026273-126
MPOB, Sfum 639700905:Sfum_001642-127
639702150:Sfum_014260-126
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0130912-137
Spalm_004023-128
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0057511-109
Swol_0126910-135
Syntrophomonas zehnderi, OL-4 Szehn Szehn_012793-131
Ga0124040_12976:Szehn_0179312-136
Syntrophus aciditrophicus, SB 637858481:SYN_001645-129
637859275:SYN_0089823-147
Syntrophus gentianae, DSM8423 Ga0074853_12733:Sgen_027365-129
Sgen_0057417-141
Mucilaginibacter gossypii, cycad 4 PaGL#42_00263192-296
Ruminococcus callidus, ATCC 27760 Rcal_006330-125
Rcal_006484-131

PF17125:Methyltr_RsmF_N. N-terminal domain of 16S rRNA methyltransferase RsmF

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511692.1:LOMAGDGF_007462-92
WP_003517649.1:LOMAGDGF_01721164-249
Acetivibrio alkalicellulosi, DSM 17461 2510061828:NJMEOJLD_02042168-248
2510062678:NJMEOJLD_028743-92
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938085.1:NEIHKHHH_019082-92
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01269165-249
Paenibacillus guangzhouensis, KCTC 33171 WP_152392318.1:KDFAKKPF_00794159-249
WP_152394349.1:KDFAKKPF_031404-96
WP_152394354.1:KDFAKKPF_031484-93
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696485.1:PROKKA_015162-91
WP_137698670.1:PROKKA_02316152-244
FD_25_22, AnGL7 AnGL7_016446-103
FD_25_27, AnGL8 AnGL8_022046-103
FD_SO4_25_1_F22, AnGL30 AnGL30_007713-91
FD_YE_25_21, AnGL21 AnGL21_015306-104
FD_YE_37_8_2, AnGL3 AnGL3_011244-88
FD_YE_37_9_2, AnGL4 AnGL4_03309159-244
Syntrophomonas wolfei methylbutyratica, Swm Swm_01436166-249
Terrisporobacter hibernicus, AnGL54 AnGL54_02148164-240
FD-25-21, AnGL21 AnGL21_009366-103
Paraclostridium benzoelyticum, AnGL27 AnGL27_03241152-240
FD-YE-37-9-3, AnGL29 AnGL29_00567159-244
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_064448-90
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02951164-240
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01269165-249
Mucilaginibacter gossypii, cycad 4 PaGL#42_055408-90

PF01189:Methyltr_RsmB-F. 16S rRNA methyltransferase RsmB/F

Found 78 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511692.1:LOMAGDGF_0074696-300
WP_003517649.1:LOMAGDGF_01721252-450
Clostridium acetobutylicum, DSM 1731 WP_010965032.1:FHOCHPCF_01768245-438
Acetivibrio alkalicellulosi, DSM 17461 2510061828:NJMEOJLD_02042252-475
2510062678:NJMEOJLD_0287499-299
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938085.1:NEIHKHHH_0190899-300
WP_036939176.1:NEIHKHHH_03446248-446
Ruminococcus albus_7, DSM 20455 WP_013498475.1:HCIAFFOI_01874244-428
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01269252-454
Paenibacillus guangzhouensis, KCTC 33171 WP_152392318.1:KDFAKKPF_00794253-456
WP_152394349.1:KDFAKKPF_03140100-280
WP_152394354.1:KDFAKKPF_0314897-314
Clostridium acetobutylicum, ATCC 824 WP_010965032.1:OJAMHIDJ_01775245-438
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696485.1:PROKKA_0151698-300
WP_137698670.1:PROKKA_02316248-445
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00639255-456
FD_25_22, AnGL7 AnGL7_00094238-428
AnGL7_01644114-309
FD_25_27, AnGL8 AnGL8_01256237-422
AnGL8_02204115-307
FD_MS_7_1, AnGL28 AnGL28_00085240-430
AnGL28_00707238-403
FD_SO4_25_1_F22, AnGL30 AnGL30_00771113-303
FD_SO4_37_1, AnGL2 AnGL2_02764240-430
AnGL2_03386238-403
FD_YE_25_21, AnGL21 AnGL21_01530115-308
AnGL21_03110237-423
FD_YE_37_8_2, AnGL3 AnGL3_01124101-292
FD_YE_37_9_2, AnGL4 AnGL4_03309250-445
Syntrophus buswellii, Sbus Sbus_01001251-448
Syntrophomonas curvata, Scurva Scurva_01655253-455
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00365255-456
Syntrophomonas wolfei methylbutyratica, Swm Swm_01436252-454
Terrisporobacter hibernicus, AnGL54 AnGL54_02148244-437
FD-25-21, AnGL21 AnGL21_00936113-309
AnGL21_02526238-428
Paraclostridium benzoelyticum, AnGL27 AnGL27_03241246-438
FD-MS-7-8, AnGL9 AnGL9_00188239-401
AnGL9_00632250-439
FD-YE-37-9-3, AnGL29 AnGL29_00567250-445
Methylobacterium radiotolerans, GTSA1 PaGL#34_00192161-365
PaGL#34_01200225-423
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02157206-358
PaGL#35_06444107-298
Syntrophomonas erecta, GB-438 Ga0610585_00639255-456
Variovorax sp., EBFNA2 PaGL#33_00625282-468
PaGL#33_04895212-418
Variovorax paradoxus, 2u118 PaGL#32_00632251-437
PaGL#32_01247212-418
Dietzia cinnamea, 55 PaGL#56_01643243-438
Maridesulfovibrio salexigens, AnGL23 AnGL23_03110250-401
AnGL23_03868138-286
Exiguobacterium mexicanum, AnGL24 AnGL24_01222241-439
Clostridium subterminale, CB-LS10-1 AnGL53_01109246-439
Priestia megaterium, 10L1 PaGL#57_03312245-443
Variovorax paradoxus, SPNA7 PaGL#43_00607251-437
PaGL#43_01239212-418
Geodermatophilus sp., RDM14 PaGL#36_02130240-424
Methylorubrum populi, CTY4 PaGL#39_00395235-415
PaGL#39_02642165-363
Fictibacillus phosphorivorans, TY7 PaGL#38_02229247-446
Syntrophomonas wolfei, saponavida Swsap_02653264-465
Bacillus subtilis, 30VD-1 PaGL#66_02555244-443
Peribacillus frigoritolerans, 30N-5 PaGL#67_04028247-446
Micromonospora inositola, Utrum1 PaGL#61_02490329-522
Sphingomonas sp., CR2A3 PaGL#62_00753202-391
PaGL#62_02709241-427
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02951244-437
Niallia taxi, AG-1 PaGL#37_01359246-446
MPOB, Sfum 639700905:Sfum_00164248-446
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01309255-455
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01269252-454
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12976:Szehn_01793255-454
Syntrophus aciditrophicus, SB 637859275:SYN_00898271-468
Syntrophus gentianae, DSM8423 Sgen_00574266-461
Mucilaginibacter gossypii, cycad 4 PaGL#42_03366205-359
PaGL#42_05540100-297
Ruminococcus callidus, ATCC 27760 Rcal_00633237-429
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