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MLKi8_00910 Locus tags: • Sequence Length: 248

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250
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MLKi8_00907 MLKi8_00908 MLKi8_00909 MLKi8_00910 MLKi8_00912 MLKi8_00913 MLKi8_00914 MLKi8_00915 
    [PF13404]_[PF00181]_[PF01037]_[PF03947]

    [0:PF13404]_[10:PF00181]_[67:PF01037]_[88:PF03947]

    [0:IPR019888]_[0:IPR000485]_[0:IPR000485]_[0:IPR036390]_[0:IPR012340]_[10:IPR002171]_[10:IPR022666]_[63:IPR011008]_[67:IPR019887]_[87:IPR022669]_[88:IPR022669]_[90:IPR008991]

Looking for similar signatures in the working genomes

PF13404:HTH_AsnC-type. AsnC-type helix-turn-helix domain

Found 86 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939513.1:NEIHKHHH_001431-43
WP_036939116.1:NEIHKHHH_033681-45
WP_036939117.1:NEIHKHHH_033690-44
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11720:GJLLLGJL_007057-51
Ga0065332_11721:GJLLLGJL_007063-47
Paenibacillus guangzhouensis, KCTC 33171 WP_152395188.1:KDFAKKPF_041165-47
KDFAKKPF_050187-49
Syntrophomonas erecta, DSM 16215 OINOEOOJ_011892-47
OINOEOOJ_011908-51
FD_25_27, AnGL8 AnGL8_012003-45
AnGL8_012246-48
FD_SO4_25_1_F22, AnGL30 AnGL30_006845-46
AnGL30_011463-44
FD_YE_25_21, AnGL21 AnGL21_000536-48
AnGL21_0207318-60
FD_YE_37_3, AnGL26 AnGL26_0072111-52
AnGL26_032876-47
FD_YE_37_8_2, AnGL3 AnGL3_004656-47
Syntrophomonas erecta sporosyntropha, Sespor Sespor_024558-51
Sespor_024562-47
FD-25-21, AnGL21 AnGL21_020740-38
Sunxiuqinia elliptica, AnGL22 AnGL22_0072211-52
AnGL22_032836-47
Methylobacterium radiotolerans, GTSA1 PaGL#34_0177411-52
PaGL#34_020210-42
PaGL#34_025650-42
Variovorax sp., EBFNA2 PaGL#33_054613-45
PaGL#33_0587511-53
Variovorax paradoxus, 2u118 PaGL#32_062374-46
PaGL#32_009395-47
PaGL#32_027129-51
Dietzia cinnamea, 55 PaGL#56_022586-48
Maridesulfovibrio salexigens, AnGL23 AnGL23_003317-48
AnGL23_019910-45
Priestia megaterium, 10L1 PaGL#57_036352-44
Variovorax paradoxus, SPNA7 PaGL#43_061834-46
PaGL#43_007913-45
PaGL#43_009305-47
Methanospirillum lacunae, Ki8-1 MLKi8_009100-41
Geodermatophilus sp., RDM14 PaGL#36_018010-41
PaGL#36_0231519-59
PaGL#36_0258410-51
PaGL#36_036540-41
PaGL#36_041304-46
Methylorubrum populi, CTY4 PaGL#39_019760-42
PaGL#39_025151-42
Fictibacillus phosphorivorans, TY7 PaGL#38_0449813-55
Methanospirillum stamsii, Pt1 MLKi8_000600-45
MLKi8_000616-45
MLKi8_011660-42
Syntrophomonas wolfei, saponavida Swsap_003195-47
Bacillus subtilis, 30VD-1 PaGL#66_0069411-52
Peribacillus frigoritolerans, 30N-5 PaGL#67_0467312-52
Micromonospora inositola, Utrum1 PaGL#61_001372-44
PaGL#61_005310-42
PaGL#61_007430-42
PaGL#61_0118525-66
PaGL#61_020471-43
PaGL#61_042290-42
PaGL#61_0524713-55
PaGL#61_067438-49
Sphingomonas sp., CR2A3 PaGL#62_001720-42
PaGL#62_027905-47
PaGL#62_029363-44
Niallia taxi, AG-1 PaGL#37_0320311-52
Methanospirillum.hungatei GP1, MhGP1 8064048662:MhGP1_019890-42
8064049723:MhGP1_030322-46
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112:Mhun_000020-42
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13834:Szehn_021463-46
Ga0124040_13835:Szehn_021474-49
Ruminococcus callidus, ATCC 27760 Rcal_016010-42

PF00181:Ribosomal_L2_N. Ribosomal Proteins L2, RNA binding N-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518557.1:LOMAGDGF_0046541-118
Clostridium acetobutylicum, DSM 1731 WP_010966409.1:FHOCHPCF_0317541-118
Acetivibrio alkalicellulosi, DSM 17461 2510061241:NJMEOJLD_0147141-118
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945073.1:NEIHKHHH_0256541-118
Ruminococcus albus_7, DSM 20455 WP_013496803.1:HCIAFFOI_0004041-116
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112490:GJLLLGJL_0244541-118
Paenibacillus guangzhouensis, KCTC 33171 WP_152395415.1:KDFAKKPF_0440941-118
Clostridium acetobutylicum, ATCC 824 WP_010966409.1:OJAMHIDJ_0318441-118
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697963.1:PROKKA_0071941-118
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0239041-118
FD_25_22, AnGL7 AnGL7_0354041-117
FD_25_27, AnGL8 AnGL8_0127841-118
FD_MS_7_1, AnGL28 AnGL28_0286241-118
FD_SO4_25_1_F22, AnGL30 AnGL30_0094741-117
FD_SO4_37_1, AnGL2 AnGL2_0199141-118
FD_YE_25_21, AnGL21 AnGL21_0286741-117
FD_YE_37_3, AnGL26 AnGL26_0112841-117
FD_YE_37_8_2, AnGL3 AnGL3_0142441-115
FD_YE_37_9_2, AnGL4 AnGL4_0236841-117
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0112741-118
Terrisporobacter hibernicus, AnGL54 AnGL54_0328541-117
FD-25-21, AnGL21 AnGL21_0273241-117
Sunxiuqinia elliptica, AnGL22 AnGL22_0113041-117
Paraclostridium benzoelyticum, AnGL27 AnGL27_0075241-117
FD-MS-7-8, AnGL9 AnGL9_0305241-118
FD-YE-37-9-3, AnGL29 AnGL29_0309341-117
Methylobacterium radiotolerans, GTSA1 PaGL#34_0247541-118
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0589542-119
Variovorax sp., EBFNA2 PaGL#33_0560641-117
Variovorax paradoxus, 2u118 PaGL#32_0489241-117
Dietzia cinnamea, 55 PaGL#56_0234241-119
Maridesulfovibrio salexigens, AnGL23 AnGL23_0203941-117
Exiguobacterium mexicanum, AnGL24 AnGL24_0297041-118
Clostridium subterminale, CB-LS10-1 AnGL53_0334741-118
Priestia megaterium, 10L1 PaGL#57_0212441-117
Variovorax paradoxus, SPNA7 PaGL#43_0507941-117
Methanospirillum lacunae, Ki8-1 MLKi8_0044110-80
Geodermatophilus sp., RDM14 PaGL#36_0378541-118
Methylorubrum populi, CTY4 PaGL#39_0190941-118
Fictibacillus phosphorivorans, TY7 PaGL#38_0052541-118
Methanospirillum stamsii, Pt1 MLKi8_0091010-79
Syntrophomonas wolfei, saponavida Swsap_0096141-118
Bacillus subtilis, 30VD-1 PaGL#66_0004941-117
Peribacillus frigoritolerans, 30N-5 PaGL#67_0013341-117
Micromonospora inositola, Utrum1 PaGL#61_0641241-119
Sphingomonas sp., CR2A3 PaGL#62_0348641-122
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0012141-117
Niallia taxi, AG-1 PaGL#37_0014241-117
Methanospirillum.hungatei GP1, MhGP1 8064048918:MhGP1_0224110-80
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113238:Mhun_0323510-80
MPOB, Sfum 639702325:Sfum_0160741-117
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1264:Spalm_0269441-118
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118127:Szehn_0028741-118
Mucilaginibacter gossypii, cycad 4 PaGL#42_0587042-118
Ruminococcus callidus, ATCC 27760 Rcal_0012441-116

PF01037:AsnC_trans_reg. Lrp/AsnC ligand binding domain

Found 194 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512628.1:LOMAGDGF_0191663-137
Clostridium acetobutylicum, DSM 1731 WP_010964295.1:FHOCHPCF_0102973-146
WP_010964776.1:FHOCHPCF_0151868-136
Acetivibrio alkalicellulosi, DSM 17461 2510063644:NJMEOJLD_0382263-137
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939513.1:NEIHKHHH_0014369-121
WP_036947371.1:NEIHKHHH_0228763-137
Ruminococcus albus_7, DSM 20455 WP_013498405.1:HCIAFFOI_0180363-137
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111270:GJLLLGJL_0124467-141
Paenibacillus guangzhouensis, KCTC 33171 WP_152394542.1:KDFAKKPF_0336471-131
WP_227793253.1:KDFAKKPF_0363569-141
WP_152395188.1:KDFAKKPF_0411672-131
KDFAKKPF_0501879-137
WP_152395945.1:KDFAKKPF_0505873-131
Clostridium acetobutylicum, ATCC 824 WP_010964295.1:OJAMHIDJ_0103273-146
WP_010964776.1:OJAMHIDJ_0152268-136
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698683.1:PROKKA_0230372-145
WP_137698837.1:PROKKA_0267763-137
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0070067-141
FD_25_22, AnGL7 AnGL7_0000866-139
AnGL7_0027368-142
AnGL7_0070569-144
FD_25_27, AnGL8 AnGL8_0120069-144
AnGL8_0122476-144
AnGL8_0022478-136
AnGL8_0024970-145
AnGL8_0204776-151
FD_MS_7_1, AnGL28 AnGL28_0324663-137
FD_SO4_25_1_F22, AnGL30 AnGL30_0068473-142
AnGL30_0114669-142
FD_SO4_37_1, AnGL2 AnGL2_0237663-137
FD_YE_25_21, AnGL21 AnGL21_0380977-149
AnGL21_0005373-144
AnGL21_0096477-152
AnGL21_0109271-144
AnGL21_0207385-158
AnGL21_0210468-142
AnGL21_0336766-139
FD_YE_37_3, AnGL26 AnGL26_0072186-149
AnGL26_0328774-145
FD_YE_37_8_2, AnGL3 AnGL3_0046581-144
FD_YE_37_9_2, AnGL4 AnGL4_0078564-138
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0031467-141
Terrisporobacter hibernicus, AnGL54 AnGL54_0194582-150
AnGL54_0334766-134
FD-25-21, AnGL21 AnGL21_0189469-144
AnGL21_0207466-140
AnGL21_0236468-142
AnGL21_0261366-139
Sunxiuqinia elliptica, AnGL22 AnGL22_0072286-149
AnGL22_0328374-145
Paraclostridium benzoelyticum, AnGL27 AnGL27_0082066-134
FD-MS-7-8, AnGL9 AnGL9_0278863-138
FD-YE-37-9-3, AnGL29 AnGL29_0151064-138
Methylobacterium radiotolerans, GTSA1 PaGL#34_063975-76
PaGL#34_0177477-152
PaGL#34_0202166-139
PaGL#34_0256568-140
PaGL#34_0519769-141
PaGL#34_0606073-147
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0073877-149
PaGL#35_0081575-145
PaGL#35_0275790-147
PaGL#35_0303083-158
Variovorax sp., EBFNA2 PaGL#33_0092685-159
PaGL#33_0131371-145
PaGL#33_0137869-142
PaGL#33_0156169-144
PaGL#33_0377576-139
PaGL#33_0380180-154
PaGL#33_0392174-148
PaGL#33_0418569-135
PaGL#33_0468170-144
PaGL#33_0546171-147
PaGL#33_0551069-144
PaGL#33_0587577-152
PaGL#33_0589969-143
PaGL#33_0592268-143
Variovorax paradoxus, 2u118 PaGL#32_0529974-148
PaGL#32_0562268-142
PaGL#32_0623773-141
PaGL#32_0627073-146
PaGL#32_0093975-149
PaGL#32_0210780-154
PaGL#32_0214175-138
PaGL#32_0271275-150
PaGL#32_0368169-135
PaGL#32_0405769-144
PaGL#32_0472871-147
PaGL#32_0478471-146
PaGL#32_0508585-160
PaGL#32_0510969-143
PaGL#32_0512968-143
Dietzia cinnamea, 55 PaGL#56_0225872-143
PaGL#56_032847-77
Maridesulfovibrio salexigens, AnGL23 AnGL23_0033172-143
AnGL23_0194981-142
AnGL23_0200583-143
Exiguobacterium mexicanum, AnGL24 AnGL24_0206469-143
AnGL24_0251887-134
Priestia megaterium, 10L1 PaGL#57_0260471-144
PaGL#57_0363568-135
PaGL#57_0667173-133
PaGL#57_0693987-135
Variovorax paradoxus, SPNA7 PaGL#43_0561268-142
PaGL#43_0618373-141
PaGL#43_0622673-146
PaGL#43_0079169-143
PaGL#43_0093075-149
PaGL#43_0221780-154
PaGL#43_0240175-138
PaGL#43_0372169-135
PaGL#43_0421969-144
PaGL#43_0487171-147
PaGL#43_0493071-146
PaGL#43_0528185-160
PaGL#43_0530569-143
PaGL#43_0533168-143
Methanospirillum lacunae, Ki8-1 MLKi8_0091067-142
Geodermatophilus sp., RDM14 PaGL#36_0180175-138
PaGL#36_018599-76
PaGL#36_0231591-154
PaGL#36_0258475-143
PaGL#36_0262469-138
PaGL#36_033075-75
PaGL#36_0365476-137
PaGL#36_0385052-112
PaGL#36_0413070-140
Methylorubrum populi, CTY4 PaGL#39_0197666-139
PaGL#39_0251567-135
PaGL#39_033375-76
Fictibacillus phosphorivorans, TY7 PaGL#38_0411469-142
PaGL#38_0449880-150
Methanospirillum stamsii, Pt1 MLKi8_0116668-142
Syntrophomonas wolfei, saponavida Swsap_0274066-141
Bacillus subtilis, 30VD-1 PaGL#66_0069478-148
PaGL#66_0117071-144
PaGL#66_0168472-145
PaGL#66_0352768-131
PaGL#66_0367069-134
PaGL#66_0376369-135
Peribacillus frigoritolerans, 30N-5 PaGL#67_0074571-144
PaGL#67_0122467-134
PaGL#67_0128472-127
PaGL#67_0276170-123
PaGL#67_0456669-136
PaGL#67_0456872-132
PaGL#67_0467378-148
Micromonospora inositola, Utrum1 PaGL#61_0013778-140
PaGL#61_0053173-138
PaGL#61_0074379-137
PaGL#61_0118591-159
PaGL#61_016265-74
PaGL#61_0204768-137
PaGL#61_0380473-137
PaGL#61_0422968-139
PaGL#61_0434090-159
PaGL#61_0524779-154
PaGL#61_054115-76
PaGL#61_0587879-130
PaGL#61_0674376-145
Sphingomonas sp., CR2A3 PaGL#62_0017267-140
PaGL#62_0062969-142
PaGL#62_0163850-124
PaGL#62_0279075-144
PaGL#62_0293667-140
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0017766-134
AnGL54_0274882-150
Niallia taxi, AG-1 PaGL#37_0411472-119
PaGL#37_0023474-147
PaGL#37_0439181-151
PaGL#37_0216672-132
PaGL#37_0320378-148
PaGL#37_0321671-145
Methanospirillum.hungatei GP1, MhGP1 8064048662:MhGP1_0198967-142
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112:Mhun_0000267-142
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11225:Spalm_0180867-141
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_127156:Szehn_0161566-141
Mucilaginibacter gossypii, cycad 4 PaGL#42_0104180-153
PaGL#42_0128670-145
PaGL#42_0164171-144
PaGL#42_0277786-147
PaGL#42_0522077-149
Ruminococcus callidus, ATCC 27760 Rcal_0101364-138
Rcal_0160168-134

PF03947:Ribosomal_L2_C. Ribosomal Proteins L2, C-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518557.1:LOMAGDGF_00465124-251
Clostridium acetobutylicum, DSM 1731 WP_010966409.1:FHOCHPCF_03175124-251
Acetivibrio alkalicellulosi, DSM 17461 2510061241:NJMEOJLD_01471124-251
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945073.1:NEIHKHHH_02565124-251
Ruminococcus albus_7, DSM 20455 WP_013496803.1:HCIAFFOI_00040124-251
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112490:GJLLLGJL_02445124-251
Paenibacillus guangzhouensis, KCTC 33171 WP_152395415.1:KDFAKKPF_04409124-251
Clostridium acetobutylicum, ATCC 824 WP_010966409.1:OJAMHIDJ_03184124-251
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697963.1:PROKKA_00719124-251
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02390124-251
FD_25_22, AnGL7 AnGL7_03540124-250
FD_25_27, AnGL8 AnGL8_01278124-250
FD_MS_7_1, AnGL28 AnGL28_02862125-250
FD_SO4_25_1_F22, AnGL30 AnGL30_00947125-249
FD_SO4_37_1, AnGL2 AnGL2_01991125-250
FD_YE_25_21, AnGL21 AnGL21_02867124-250
FD_YE_37_3, AnGL26 AnGL26_01128125-248
FD_YE_37_8_2, AnGL3 AnGL3_01424125-249
FD_YE_37_9_2, AnGL4 AnGL4_02368125-251
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01127124-251
Terrisporobacter hibernicus, AnGL54 AnGL54_03285124-251
FD-25-21, AnGL21 AnGL21_02732124-250
Sunxiuqinia elliptica, AnGL22 AnGL22_01130125-248
Paraclostridium benzoelyticum, AnGL27 AnGL27_00752124-251
FD-MS-7-8, AnGL9 AnGL9_03052125-250
FD-YE-37-9-3, AnGL29 AnGL29_03093125-251
Methylobacterium radiotolerans, GTSA1 PaGL#34_02475125-251
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05895126-250
Variovorax sp., EBFNA2 PaGL#33_05606125-250
Variovorax paradoxus, 2u118 PaGL#32_04892125-250
Dietzia cinnamea, 55 PaGL#56_02342125-251
Maridesulfovibrio salexigens, AnGL23 AnGL23_02039124-250
Exiguobacterium mexicanum, AnGL24 AnGL24_02970124-251
Clostridium subterminale, CB-LS10-1 AnGL53_03347124-251
Priestia megaterium, 10L1 PaGL#57_02124124-251
Variovorax paradoxus, SPNA7 PaGL#43_05079125-250
Methanospirillum lacunae, Ki8-1 MLKi8_0044188-216
Geodermatophilus sp., RDM14 PaGL#36_03785125-251
Methylorubrum populi, CTY4 PaGL#39_01909125-251
Fictibacillus phosphorivorans, TY7 PaGL#38_00525124-251
Methanospirillum stamsii, Pt1 MLKi8_0091088-216
Syntrophomonas wolfei, saponavida Swsap_00961124-251
Bacillus subtilis, 30VD-1 PaGL#66_00049124-251
Peribacillus frigoritolerans, 30N-5 PaGL#67_00133124-251
Micromonospora inositola, Utrum1 PaGL#61_06412125-251
Sphingomonas sp., CR2A3 PaGL#62_03486129-255
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00121124-251
Niallia taxi, AG-1 PaGL#37_00142124-251
Methanospirillum.hungatei GP1, MhGP1 8064048918:MhGP1_0224188-216
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113238:Mhun_0323589-216
MPOB, Sfum 639702325:Sfum_01607124-250
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1264:Spalm_02694124-251
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118127:Szehn_00287124-251
Mucilaginibacter gossypii, cycad 4 PaGL#42_05870126-250
Ruminococcus callidus, ATCC 27760 Rcal_00124124-251
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