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MLKi8_01673 Locus tags: • Sequence Length: 191

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200
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MLKi8_01668 MLKi8_01670 MLKi8_01671 MLKi8_01674 MLKi8_01677 MLKi8_01678 
    [SP]_[PF01192]_[PF13414]_[TM]

    [SP]_[4:PF01192]_[87:PF13414]_[TM]

    [SP]_[3:IPR036161]_[4:IPR006110]_[38:IPR011990]_[45:IPR019734]_[45:IPR019734]_[79:IPR019734]_[79:IPR019734]_[113:IPR019734]_[113:IPR019734]_[TM]

Looking for similar signatures in the working genomes

PF01192:RNA_pol_Rpb6. RNA polymerase Rpb6

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517000.1:LOMAGDGF_0097718-70
Clostridium acetobutylicum, DSM 1731 WP_010965026.1:FHOCHPCF_0176211-64
Acetivibrio alkalicellulosi, DSM 17461 2510060715:NJMEOJLD_009588-60
2510063686:NJMEOJLD_0386417-69
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946977.1:NEIHKHHH_020718-60
WP_036942027.1:NEIHKHHH_031748-60
Ruminococcus albus_7, DSM 20455 WP_013498471.1:HCIAFFOI_018708-59
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_012777-58
Paenibacillus guangzhouensis, KCTC 33171 WP_152392313.1:KDFAKKPF_007898-61
Clostridium acetobutylicum, ATCC 824 WP_010965026.1:OJAMHIDJ_0176911-64
Ruminiclostridium herbifermentans MA18, DSM 109966 PROKKA_018147-60
Syntrophomonas erecta, DSM 16215 OINOEOOJ_006318-60
FD_25_22, AnGL7 AnGL7_036159-60
FD_25_27, AnGL8 AnGL8_030938-60
FD_MS_7_1, AnGL28 AnGL28_0312017-61
FD_SO4_25_1_F22, AnGL30 AnGL30_0210218-98
FD_SO4_37_1, AnGL2 AnGL2_0225017-61
FD_YE_25_21, AnGL21 AnGL21_001228-60
FD_YE_37_3, AnGL26 AnGL26_0301618-98
FD_YE_37_8_2, AnGL3 AnGL3_0331422-73
FD_YE_37_9_2, AnGL4 AnGL4_0330421-81
Syntrophus buswellii, Sbus Sbus_004469-58
Syntrophomonas curvata, Scurva Scurva_016633-49
Syntrophomonas erecta sporosyntropha, Sespor Sespor_003738-60
Syntrophomonas wolfei methylbutyratica, Swm Swm_014447-58
Terrisporobacter hibernicus, AnGL54 AnGL54_021557-61
FD-25-21, AnGL21 AnGL21_026699-60
Sunxiuqinia elliptica, AnGL22 AnGL22_0301218-98
Paraclostridium benzoelyticum, AnGL27 AnGL27_032489-63
FD-YE-37-9-3, AnGL29 AnGL29_0056221-81
Methylobacterium radiotolerans, GTSA1 PaGL#34_021327-58
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0603125-76
Syntrophomonas erecta, GB-438 Ga0610585_006318-60
Variovorax sp., EBFNA2 PaGL#33_050247-59
Variovorax paradoxus, 2u118 PaGL#32_043697-58
Dietzia cinnamea, 55 PaGL#56_0164925-88
Maridesulfovibrio salexigens, AnGL23 AnGL23_006327-57
Exiguobacterium mexicanum, AnGL24 AnGL24_0121812-61
Clostridium subterminale, CB-LS10-1 AnGL53_0110315-68
Priestia megaterium, 10L1 PaGL#57_033078-60
Variovorax paradoxus, SPNA7 PaGL#43_045347-58
Methanospirillum lacunae, Ki8-1 MLKi8_016734-50
Geodermatophilus sp., RDM14 PaGL#36_0212317-81
Methylorubrum populi, CTY4 PaGL#39_029057-58
Fictibacillus phosphorivorans, TY7 PaGL#38_022248-59
Methanospirillum hungatei, GP1 MhGP1_013112-50
Methanospirillum stamsii, Pt1 MLKi8_015952-50
Syntrophomonas wolfei, saponavida Swsap_026457-59
Bacillus subtilis, 30VD-1 PaGL#66_025608-60
Peribacillus frigoritolerans, 30N-5 PaGL#67_040338-61
Micromonospora inositola, Utrum1 PaGL#61_0248216-80
Sphingomonas sp., CR2A3 PaGL#62_024397-59
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_029587-61
Niallia taxi, AG-1 PaGL#37_013548-61
Methanospirillum.hungatei GP1, MhGP1 8064048253:MhGP1_015922-50
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11456:Mhun_004542-50
MPOB, Sfum 639702527:Sfum_018087-58
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10834:Spalm_013187-60
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_012777-58
Syntrophomonas zehnderi, OL-4 Szehn Szehn_017859-54
Syntrophus aciditrophicus, SB 637858579:SYN_002568-58
Syntrophus gentianae, DSM8423 Ga0074853_102101:Sgen_0031211-58
Mucilaginibacter gossypii, cycad 4 PaGL#42_0568722-76
Ruminococcus callidus, ATCC 27760 Rcal_0062810-62

PF13414:TPR_11. TPR repeat

Found 171 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514804.1:LOMAGDGF_0062036-77
WP_003519075.1:LOMAGDGF_01842349-391
825-867
WP_003513992.1:LOMAGDGF_0272645-84
Clostridium acetobutylicum, DSM 1731 WP_010963737.1:FHOCHPCF_0045921-53
Acetivibrio alkalicellulosi, DSM 17461 2510060247:NJMEOJLD_00499418-455
655-695
2510063070:NJMEOJLD_0325836-76
460-502
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753151.1:NEIHKHHH_0114625-54
WP_036940678.1:NEIHKHHH_0118325-54
WP_050753534.1:NEIHKHHH_03347113-149
WP_036944870.1:NEIHKHHH_04512657-694
Paenibacillus guangzhouensis, KCTC 33171 WP_152391906.1:KDFAKKPF_00324774-814
WP_152393929.1:KDFAKKPF_0264515-43
Clostridium acetobutylicum, ATCC 824 WP_010963737.1:OJAMHIDJ_0046021-53
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696294.1:PROKKA_01726416-450
WP_137695891.1:PROKKA_0216941-80
FD_MS_7_1, AnGL28 AnGL28_01163278-319
AnGL28_0181237-77
AnGL28_01925688-730
FD_SO4_25_1_F22, AnGL30 AnGL30_0026252-82
AnGL30_01984290-328
FD_SO4_37_1, AnGL2 AnGL2_00293278-319
AnGL2_0094137-77
AnGL2_01054688-730
FD_YE_37_3, AnGL26 AnGL26_03029198-239
570-605
AnGL26_04124286-319
FD_YE_37_8_2, AnGL3 AnGL3_0029275-114
AnGL3_03318208-247
FD_YE_37_9_2, AnGL4 AnGL4_03030212-253
Syntrophus buswellii, Sbus Sbus_0055435-71
Sbus_00794107-147
175-215
Sbus_0107536-77
Sbus_0179257-98
Syntrophomonas curvata, Scurva Scurva_00426181-219
249-290
Sunxiuqinia elliptica, AnGL22 AnGL22_03025198-239
570-605
AnGL22_04120286-319
FD-MS-7-8, AnGL9 AnGL9_01060505-547
AnGL9_0205637-76
FD-YE-37-9-3, AnGL29 AnGL29_00288212-253
Methylobacterium radiotolerans, GTSA1 PaGL#34_01235143-184
210-252
PaGL#34_04535499-539
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00749216-248
PaGL#35_03755307-335
Variovorax sp., EBFNA2 PaGL#33_00483107-146
PaGL#33_02669102-140
PaGL#33_0370474-112
Variovorax paradoxus, 2u118 PaGL#32_05558222-259
PaGL#32_03185102-140
Maridesulfovibrio salexigens, AnGL23 AnGL23_00249171-209
AnGL23_00369100-142
AnGL23_00791346-383
AnGL23_0193499-141
AnGL23_01996139-180
AnGL23_02285266-301
AnGL23_03109177-215
AnGL23_03712346-382
Exiguobacterium mexicanum, AnGL24 AnGL24_0106612-50
Variovorax paradoxus, SPNA7 PaGL#43_03238102-140
Methanospirillum lacunae, Ki8-1 MLKi8_0060392-130
MLKi8_0071316-56
MLKi8_00875164-206
MLKi8_0110735-71
100-136
MLKi8_0150756-83
MLKi8_0153861-103
132-171
MLKi8_01552116-157
MLKi8_01694442-481
MLKi8_0178246-87
MLKi8_01906392-430
MLKi8_02194130-166
MLKi8_02204108-142
MLKi8_02359241-279
MLKi8_0246436-78
288-323
MLKi8_02535161-203
MLKi8_02572538-577
MLKi8_028131070-1112
MLKi8_0337339-80
Methanospirillum hungatei, GP1 MhGP1_00633171-213
MhGP1_0098467-100
MhGP1_01025196-238
MhGP1_0109061-103
MhGP1_0109727-57
MhGP1_0140033-75
135-177
305-345
MhGP1_01527121-154
MhGP1_01710137-179
MhGP1_01827423-452
MhGP1_0183634-69
MhGP1_0271632-74
MhGP1_02729238-268
MhGP1_027651066-1108
MhGP1_03052276-315
378-414
Methanospirillum stamsii, Pt1 MLKi8_0007435-77
MLKi8_00239376-414
MLKi8_0033536-75
MLKi8_00508192-221
MLKi8_0100416-56
MLKi8_0123766-102
MLKi8_0132570-106
MLKi8_0134143-73
MLKi8_0155335-75
MLKi8_0167387-125
MLKi8_01689134-176
304-343
MLKi8_0206665-104
MLKi8_0212435-77
MLKi8_02448196-238
MLKi8_02495151-192
MLKi8_0279486-126
MLKi8_0308960-102
MLKi8_03135158-191
MLKi8_03193289-327
493-532
Bacillus subtilis, 30VD-1 PaGL#66_0159447-78
Peribacillus frigoritolerans, 30N-5 PaGL#67_0209042-82
Niallia taxi, AG-1 PaGL#37_0279540-81
Methanospirillum.hungatei GP1, MhGP1 8064046764:MhGP1_001381066-1108
8064046800:MhGP1_00174238-268
8064046813:MhGP1_0018732-74
8064047714:MhGP1_0106734-69
8064047723:MhGP1_01076423-452
8064047844:MhGP1_01193137-179
8064048033:MhGP1_01375121-154
8064048164:MhGP1_0150333-75
135-177
305-345
8064048476:MhGP1_0180527-57
8064048483:MhGP1_0181261-103
8064048548:MhGP1_01877196-238
8064048591:MhGP1_0191867-100
8064048946:MhGP1_02269171-213
8064049785:MhGP1_03094276-315
378-414
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11357:Mhun_00355135-176
Ga0065338_11707:Mhun_0070727-57
Ga0065338_11776:Mhun_00777194-236
Ga0065338_11935:Mhun_00934137-179
Ga0065338_111159:Mhun_0115969-108
Ga0065338_111804:Mhun_0180632-74
Ga0065338_111854:Mhun_018561066-1108
Ga0065338_112400:Mhun_02398276-315
376-414
Ga0065338_112566:Mhun_02564106-144
Ga0065338_113043:Mhun_030420-34
MPOB, Sfum 639703303:Sfum_02613553-591
Sfum_04161547-585
Syntrophus aciditrophicus, SB 637858741:SYN_0039934-74
637859200:SYN_00831115-155
637859613:SYN_01211191-227
637859648:SYN_01245263-305
637860250:SYN_0182039-78
Syntrophus gentianae, DSM8423 Sgen_0144035-71
Ga0074853_12117:Sgen_02457175-215
Ga0074853_11520:Sgen_0202836-77
Ga0074853_13328:Sgen_02951103-141
Ga0074853_107115:Sgen_0127558-99
Mucilaginibacter gossypii, cycad 4 PaGL#42_02989202-236
PaGL#42_03512769-809
PaGL#42_0445829-70
PaGL#42_0462438-77
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