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PaGL#42_04458 Locus tags: • Sequence Length: 264

Mucilaginibacter gossypii, cycad 4 Batch3_genome_fasta/M.gossypii

5050100100150150200200250250300300
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PaGL#42_04453 PaGL#42_04454 PaGL#42_04455 PaGL#42_04457 PaGL#42_04459 PaGL#42_04460 PaGL#42_04461 PaGL#42_04462 
    [SP]_[PF13414]_[PF08239]_[TM]

    [SP]_[29:PF13414]_[198:PF08239]_[TM]

    [SP]_[18:IPR011990]_[22:IPR019734]_[56:IPR019734]_[56:IPR019734]_[189:IPR003646]_[189:IPR003646]_[198:IPR003646]_[TM]

Looking for similar signatures in the working genomes

PF13414:TPR_11. TPR repeat

Found 171 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514804.1:LOMAGDGF_0062036-77
WP_003519075.1:LOMAGDGF_01842349-391
825-867
WP_003513992.1:LOMAGDGF_0272645-84
Clostridium acetobutylicum, DSM 1731 WP_010963737.1:FHOCHPCF_0045921-53
Acetivibrio alkalicellulosi, DSM 17461 2510060247:NJMEOJLD_00499418-455
655-695
2510063070:NJMEOJLD_0325836-76
460-502
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753151.1:NEIHKHHH_0114625-54
WP_036940678.1:NEIHKHHH_0118325-54
WP_050753534.1:NEIHKHHH_03347113-149
WP_036944870.1:NEIHKHHH_04512657-694
Paenibacillus guangzhouensis, KCTC 33171 WP_152391906.1:KDFAKKPF_00324774-814
WP_152393929.1:KDFAKKPF_0264515-43
Clostridium acetobutylicum, ATCC 824 WP_010963737.1:OJAMHIDJ_0046021-53
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696294.1:PROKKA_01726416-450
WP_137695891.1:PROKKA_0216941-80
FD_MS_7_1, AnGL28 AnGL28_01163278-319
AnGL28_0181237-77
AnGL28_01925688-730
FD_SO4_25_1_F22, AnGL30 AnGL30_0026252-82
AnGL30_01984290-328
FD_SO4_37_1, AnGL2 AnGL2_00293278-319
AnGL2_0094137-77
AnGL2_01054688-730
FD_YE_37_3, AnGL26 AnGL26_03029198-239
570-605
AnGL26_04124286-319
FD_YE_37_8_2, AnGL3 AnGL3_0029275-114
AnGL3_03318208-247
FD_YE_37_9_2, AnGL4 AnGL4_03030212-253
Syntrophus buswellii, Sbus Sbus_0055435-71
Sbus_00794107-147
175-215
Sbus_0107536-77
Sbus_0179257-98
Syntrophomonas curvata, Scurva Scurva_00426181-219
249-290
Sunxiuqinia elliptica, AnGL22 AnGL22_03025198-239
570-605
AnGL22_04120286-319
FD-MS-7-8, AnGL9 AnGL9_01060505-547
AnGL9_0205637-76
FD-YE-37-9-3, AnGL29 AnGL29_00288212-253
Methylobacterium radiotolerans, GTSA1 PaGL#34_01235143-184
210-252
PaGL#34_04535499-539
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00749216-248
PaGL#35_03755307-335
Variovorax sp., EBFNA2 PaGL#33_00483107-146
PaGL#33_02669102-140
PaGL#33_0370474-112
Variovorax paradoxus, 2u118 PaGL#32_05558222-259
PaGL#32_03185102-140
Maridesulfovibrio salexigens, AnGL23 AnGL23_00249171-209
AnGL23_00369100-142
AnGL23_00791346-383
AnGL23_0193499-141
AnGL23_01996139-180
AnGL23_02285266-301
AnGL23_03109177-215
AnGL23_03712346-382
Exiguobacterium mexicanum, AnGL24 AnGL24_0106612-50
Variovorax paradoxus, SPNA7 PaGL#43_03238102-140
Methanospirillum lacunae, Ki8-1 MLKi8_0060392-130
MLKi8_0071316-56
MLKi8_00875164-206
MLKi8_0110735-71
100-136
MLKi8_0150756-83
MLKi8_0153861-103
132-171
MLKi8_01552116-157
MLKi8_01694442-481
MLKi8_0178246-87
MLKi8_01906392-430
MLKi8_02194130-166
MLKi8_02204108-142
MLKi8_02359241-279
MLKi8_0246436-78
288-323
MLKi8_02535161-203
MLKi8_02572538-577
MLKi8_028131070-1112
MLKi8_0337339-80
Methanospirillum hungatei, GP1 MhGP1_00633171-213
MhGP1_0098467-100
MhGP1_01025196-238
MhGP1_0109061-103
MhGP1_0109727-57
MhGP1_0140033-75
135-177
305-345
MhGP1_01527121-154
MhGP1_01710137-179
MhGP1_01827423-452
MhGP1_0183634-69
MhGP1_0271632-74
MhGP1_02729238-268
MhGP1_027651066-1108
MhGP1_03052276-315
378-414
Methanospirillum stamsii, Pt1 MLKi8_0007435-77
MLKi8_00239376-414
MLKi8_0033536-75
MLKi8_00508192-221
MLKi8_0100416-56
MLKi8_0123766-102
MLKi8_0132570-106
MLKi8_0134143-73
MLKi8_0155335-75
MLKi8_0167387-125
MLKi8_01689134-176
304-343
MLKi8_0206665-104
MLKi8_0212435-77
MLKi8_02448196-238
MLKi8_02495151-192
MLKi8_0279486-126
MLKi8_0308960-102
MLKi8_03135158-191
MLKi8_03193289-327
493-532
Bacillus subtilis, 30VD-1 PaGL#66_0159447-78
Peribacillus frigoritolerans, 30N-5 PaGL#67_0209042-82
Niallia taxi, AG-1 PaGL#37_0279540-81
Methanospirillum.hungatei GP1, MhGP1 8064046764:MhGP1_001381066-1108
8064046800:MhGP1_00174238-268
8064046813:MhGP1_0018732-74
8064047714:MhGP1_0106734-69
8064047723:MhGP1_01076423-452
8064047844:MhGP1_01193137-179
8064048033:MhGP1_01375121-154
8064048164:MhGP1_0150333-75
135-177
305-345
8064048476:MhGP1_0180527-57
8064048483:MhGP1_0181261-103
8064048548:MhGP1_01877196-238
8064048591:MhGP1_0191867-100
8064048946:MhGP1_02269171-213
8064049785:MhGP1_03094276-315
378-414
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11357:Mhun_00355135-176
Ga0065338_11707:Mhun_0070727-57
Ga0065338_11776:Mhun_00777194-236
Ga0065338_11935:Mhun_00934137-179
Ga0065338_111159:Mhun_0115969-108
Ga0065338_111804:Mhun_0180632-74
Ga0065338_111854:Mhun_018561066-1108
Ga0065338_112400:Mhun_02398276-315
376-414
Ga0065338_112566:Mhun_02564106-144
Ga0065338_113043:Mhun_030420-34
MPOB, Sfum 639703303:Sfum_02613553-591
Sfum_04161547-585
Syntrophus aciditrophicus, SB 637858741:SYN_0039934-74
637859200:SYN_00831115-155
637859613:SYN_01211191-227
637859648:SYN_01245263-305
637860250:SYN_0182039-78
Syntrophus gentianae, DSM8423 Sgen_0144035-71
Ga0074853_12117:Sgen_02457175-215
Ga0074853_11520:Sgen_0202836-77
Ga0074853_13328:Sgen_02951103-141
Ga0074853_107115:Sgen_0127558-99
Mucilaginibacter gossypii, cycad 4 PaGL#42_02989202-236
PaGL#42_03512769-809
PaGL#42_0445829-70
PaGL#42_0462438-77

PF08239:SH3_3. Bacterial SH3 domain

Found 378 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514709.1:LOMAGDGF_0051548-100
WP_003516509.1:LOMAGDGF_0167239-89
163-215
WP_235825051.1:LOMAGDGF_02545106-155
Clostridium acetobutylicum, DSM 1731 WP_241393092.1:FHOCHPCF_0274657-113
WP_010966016.1:FHOCHPCF_02779245-299
Acetivibrio alkalicellulosi, DSM 17461 2510060551:NJMEOJLD_00799108-161
2510061308:NJMEOJLD_0153747-98
2510063697:NJMEOJLD_03875392-445
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946242.1:NEIHKHHH_0034039-88
103-154
WP_036943756.1:NEIHKHHH_01447392-453
WP_036936743.1:NEIHKHHH_0386948-92
WP_036936509.1:NEIHKHHH_03986211-248
WP_036937631.1:NEIHKHHH_041901308-1362
WP_050753807.1:NEIHKHHH_0515354-102
Ruminococcus albus_7, DSM 20455 WP_013496865.1:HCIAFFOI_00111156-207
WP_013497534.1:HCIAFFOI_0085654-106
WP_013499474.1:HCIAFFOI_02987153-202
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11139:GJLLLGJL_0013539-90
105-152
199-249
419-466
Ga0065332_111660:GJLLLGJL_0162850-102
Ga0065332_111736:GJLLLGJL_01704306-356
Paenibacillus guangzhouensis, KCTC 33171 WP_152391967.1:KDFAKKPF_00393698-748
WP_152394040.1:KDFAKKPF_0276986-139
152-202
WP_152396011.1:KDFAKKPF_05130159-210
Clostridium acetobutylicum, ATCC 824 WP_241393092.1:OJAMHIDJ_0275457-113
WP_010966016.1:OJAMHIDJ_02787245-299
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697080.1:PROKKA_0003457-104
WP_244648306.1:PROKKA_00275182-228
WP_190530454.1:PROKKA_0033439-99
WP_137697592.1:PROKKA_0065248-89
WP_137698689.1:PROKKA_0229737-87
98-148
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0207940-90
124-174
338-388
FD_25_22, AnGL7 AnGL7_0017732-83
FD_25_27, AnGL8 AnGL8_0150332-84
FD_MS_7_1, AnGL28 AnGL28_0325530-81
90-139
FD_SO4_37_1, AnGL2 AnGL2_0238530-81
90-139
FD_YE_25_21, AnGL21 AnGL21_0271231-82
AnGL21_0338666-125
FD_YE_37_9_2, AnGL4 AnGL4_00626322-375
AnGL4_0251157-111
Syntrophomonas curvata, Scurva Scurva_0021853-104
117-167
199-250
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0149340-90
124-174
338-388
Syntrophomonas wolfei methylbutyratica, Swm Swm_0013535-86
101-148
195-245
415-462
Swm_0182950-102
Swm_01925306-356
Terrisporobacter hibernicus, AnGL54 AnGL54_04795307-357
AnGL54_0436240-92
103-154
AnGL54_0436538-92
112-164
179-233
245-298
312-362
AnGL54_0437055-106
131-183
AnGL54_0448339-89
109-162
189-242
AnGL54_0448439-89
AnGL54_04158258-316
AnGL54_0417519-70
80-128
AnGL54_0081458-102
AnGL54_01008310-359
AnGL54_0104656-108
130-182
202-254
276-328
345-396
AnGL54_0107149-99
117-168
188-242
AnGL54_0175133-84
104-155
174-225
AnGL54_01845100-151
548-601
614-667
676-730
AnGL54_0191658-110
134-185
212-264
290-341
362-413
AnGL54_0225649-115
AnGL54_0235814-66
82-134
AnGL54_0235938-89
102-153
170-221
237-289
AnGL54_0246933-85
100-152
187-239
249-300
AnGL54_0254555-107
129-180
197-248
AnGL54_0262438-90
97-149
AnGL54_03610116-167
392-444
466-518
540-592
614-666
684-735
AnGL54_0387837-88
104-155
178-229
253-304
FD-25-21, AnGL21 AnGL21_0244232-83
Paraclostridium benzoelyticum, AnGL27 AnGL27_0019451-103
114-165
AnGL27_0140545-96
116-166
188-239
261-312
AnGL27_0155132-84
102-153
191-242
269-320
345-396
423-474
AnGL27_0166842-92
102-153
AnGL27_01706222-273
AnGL27_0171941-91
101-152
AnGL27_0180140-90
AnGL27_0185835-87
108-161
185-238
260-313
AnGL27_0207722-72
79-130
AnGL27_0207933-83
104-155
183-236
AnGL27_02699339-390
413-465
489-541
565-617
640-692
711-763
AnGL27_03348341-393
413-467
AnGL27_0364169-110
123-172
FD-MS-7-8, AnGL9 AnGL9_0100790-140
FD-YE-37-9-3, AnGL29 AnGL29_01351322-375
AnGL29_0323657-111
Methylobacterium radiotolerans, GTSA1 PaGL#34_0294148-105
120-179
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00065208-258
PaGL#35_0042553-108
PaGL#35_03813219-270
Syntrophomonas erecta, GB-438 Ga0610585_0207940-90
124-174
338-388
Variovorax sp., EBFNA2 PaGL#33_0022231-85
PaGL#33_0228236-86
97-153
Variovorax paradoxus, 2u118 PaGL#32_0018831-85
PaGL#32_0350135-86
96-152
Maridesulfovibrio salexigens, AnGL23 AnGL23_00950323-380
Exiguobacterium mexicanum, AnGL24 AnGL24_0053150-101
120-171
189-240
AnGL24_0066040-90
110-163
666-717
AnGL24_0199839-89
AnGL24_0207135-86
465-514
AnGL24_0234152-107
AnGL24_0241798-149
173-223
259-310
341-392
AnGL24_0258139-90
AnGL24_0265740-88
Clostridium subterminale, CB-LS10-1 AnGL53_0016249-100
119-169
204-255
292-343
Priestia megaterium, 10L1 PaGL#57_0206344-94
113-163
183-233
253-303
PaGL#57_0042038-87
109-158
PaGL#57_01164193-251
PaGL#57_01244273-324
345-397
PaGL#57_0292236-85
PaGL#57_01424202-247
PaGL#57_0400753-105
119-171
192-243
PaGL#57_0441838-88
110-163
187-239
264-316
335-384
PaGL#57_06302364-420
PaGL#57_0695952-103
115-172
Variovorax paradoxus, SPNA7 PaGL#43_0018332-86
PaGL#43_0354035-86
96-152
PaGL#43_0439111-63
Methylorubrum populi, CTY4 PaGL#39_0036555-112
129-189
PaGL#39_0444035-92
Fictibacillus phosphorivorans, TY7 PaGL#38_0008336-86
104-157
179-230
PaGL#38_0186737-88
114-164
199-250
284-336
PaGL#38_04220222-274
Syntrophomonas wolfei, saponavida Swsap_0120346-98
Swsap_0130441-92
106-156
319-368
Swsap_0232546-98
110-158
315-362
Bacillus subtilis, 30VD-1 PaGL#66_0070855-107
PaGL#66_00727638-680
PaGL#66_0158538-88
111-161
188-239
265-317
PaGL#66_0332751-101
Peribacillus frigoritolerans, 30N-5 PaGL#67_00506637-687
PaGL#67_0098646-97
122-174
199-251
276-328
354-405
431-482
508-559
584-636
664-716
PaGL#67_0202239-90
111-162
194-244
267-319
344-393
Sphingomonas sp., CR2A3 PaGL#62_0109032-87
100-150
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00440116-167
392-444
466-518
540-592
614-666
684-735
AnGL54_0070737-88
104-155
178-229
253-304
AnGL54_00987258-316
AnGL54_0100419-70
80-128
AnGL54_0119140-92
103-154
AnGL54_0119438-92
112-164
179-233
245-298
312-362
AnGL54_0119955-106
131-183
AnGL54_0131339-89
109-162
189-242
AnGL54_0131439-89
AnGL54_0154458-102
AnGL54_01736310-359
AnGL54_0177456-108
130-182
202-254
276-328
345-396
AnGL54_0179949-99
117-168
188-242
AnGL54_02185307-357
AnGL54_0255533-84
104-155
174-225
AnGL54_02649100-151
548-601
614-667
676-730
AnGL54_0272058-110
134-185
212-264
290-341
362-413
AnGL54_0305949-115
AnGL54_0316214-66
82-134
AnGL54_0316338-89
102-153
170-221
237-289
AnGL54_0327333-85
100-152
187-239
249-300
AnGL54_0334955-107
129-180
197-248
AnGL54_0342738-90
97-149
Niallia taxi, AG-1 PaGL#37_0404484-136
151-203
PaGL#37_05856129-180
199-250
270-320
415-458
488-520
PaGL#37_0057751-104
PaGL#37_0117640-92
107-159
195-247
281-333
366-418
451-503
536-588
626-678
PaGL#37_02119153-204
224-275
PaGL#37_0281234-85
112-164
187-236
260-310
PaGL#37_03080616-666
MPOB, Sfum 639703145:Sfum_0244333-83
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01449119-169
Ga0128340_10929:Spalm_0145032-70
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11139:Swol_0013539-90
105-152
199-249
419-466
Ga0065332_111660:Swol_0162850-102
Ga0065332_111736:Swol_01704306-356
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12118:Szehn_01168168-217
Ga0124040_10576:Szehn_0048846-98
125-172
326-377
Szehn_0009040-97
Szehn_0009440-97
Mucilaginibacter gossypii, cycad 4 PaGL#42_04458198-247
Ruminococcus callidus, ATCC 27760 Rcal_01996192-243
Rcal_02934258-310
352-404
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