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LOMAGDGF_00515 Locus tags: • Sequence Length: 294

Acetivibrio thermocellus, DSM 1313 GCF_000184925.1

5050100100150150200200250250300300
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LOMAGDGF_00510 LOMAGDGF_00511 LOMAGDGF_00512 ispF LOMAGDGF_00514 LOMAGDGF_00516 LOMAGDGF_00517 
    [SP]_[PF08239]_[PF00188]_[TM]

    [SP]_[48:PF08239]_[161:PF00188]_[TM]

    [SP]_[39:IPR003646]_[39:IPR003646]_[48:IPR003646]_[154:IPR035940]_[161:IPR014044]_[TM]

Looking for similar signatures in the working genomes

PF08239:SH3_3. Bacterial SH3 domain

Found 378 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514709.1:LOMAGDGF_0051548-100
WP_003516509.1:LOMAGDGF_0167239-89
163-215
WP_235825051.1:LOMAGDGF_02545106-155
Clostridium acetobutylicum, DSM 1731 WP_241393092.1:FHOCHPCF_0274657-113
WP_010966016.1:FHOCHPCF_02779245-299
Acetivibrio alkalicellulosi, DSM 17461 2510060551:NJMEOJLD_00799108-161
2510061308:NJMEOJLD_0153747-98
2510063697:NJMEOJLD_03875392-445
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946242.1:NEIHKHHH_0034039-88
103-154
WP_036943756.1:NEIHKHHH_01447392-453
WP_036936743.1:NEIHKHHH_0386948-92
WP_036936509.1:NEIHKHHH_03986211-248
WP_036937631.1:NEIHKHHH_041901308-1362
WP_050753807.1:NEIHKHHH_0515354-102
Ruminococcus albus_7, DSM 20455 WP_013496865.1:HCIAFFOI_00111156-207
WP_013497534.1:HCIAFFOI_0085654-106
WP_013499474.1:HCIAFFOI_02987153-202
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11139:GJLLLGJL_0013539-90
105-152
199-249
419-466
Ga0065332_111660:GJLLLGJL_0162850-102
Ga0065332_111736:GJLLLGJL_01704306-356
Paenibacillus guangzhouensis, KCTC 33171 WP_152391967.1:KDFAKKPF_00393698-748
WP_152394040.1:KDFAKKPF_0276986-139
152-202
WP_152396011.1:KDFAKKPF_05130159-210
Clostridium acetobutylicum, ATCC 824 WP_241393092.1:OJAMHIDJ_0275457-113
WP_010966016.1:OJAMHIDJ_02787245-299
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697080.1:PROKKA_0003457-104
WP_244648306.1:PROKKA_00275182-228
WP_190530454.1:PROKKA_0033439-99
WP_137697592.1:PROKKA_0065248-89
WP_137698689.1:PROKKA_0229737-87
98-148
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0207940-90
124-174
338-388
FD_25_22, AnGL7 AnGL7_0017732-83
FD_25_27, AnGL8 AnGL8_0150332-84
FD_MS_7_1, AnGL28 AnGL28_0325530-81
90-139
FD_SO4_37_1, AnGL2 AnGL2_0238530-81
90-139
FD_YE_25_21, AnGL21 AnGL21_0271231-82
AnGL21_0338666-125
FD_YE_37_9_2, AnGL4 AnGL4_00626322-375
AnGL4_0251157-111
Syntrophomonas curvata, Scurva Scurva_0021853-104
117-167
199-250
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0149340-90
124-174
338-388
Syntrophomonas wolfei methylbutyratica, Swm Swm_0013535-86
101-148
195-245
415-462
Swm_0182950-102
Swm_01925306-356
Terrisporobacter hibernicus, AnGL54 AnGL54_04795307-357
AnGL54_0436240-92
103-154
AnGL54_0436538-92
112-164
179-233
245-298
312-362
AnGL54_0437055-106
131-183
AnGL54_0448339-89
109-162
189-242
AnGL54_0448439-89
AnGL54_04158258-316
AnGL54_0417519-70
80-128
AnGL54_0081458-102
AnGL54_01008310-359
AnGL54_0104656-108
130-182
202-254
276-328
345-396
AnGL54_0107149-99
117-168
188-242
AnGL54_0175133-84
104-155
174-225
AnGL54_01845100-151
548-601
614-667
676-730
AnGL54_0191658-110
134-185
212-264
290-341
362-413
AnGL54_0225649-115
AnGL54_0235814-66
82-134
AnGL54_0235938-89
102-153
170-221
237-289
AnGL54_0246933-85
100-152
187-239
249-300
AnGL54_0254555-107
129-180
197-248
AnGL54_0262438-90
97-149
AnGL54_03610116-167
392-444
466-518
540-592
614-666
684-735
AnGL54_0387837-88
104-155
178-229
253-304
FD-25-21, AnGL21 AnGL21_0244232-83
Paraclostridium benzoelyticum, AnGL27 AnGL27_0019451-103
114-165
AnGL27_0140545-96
116-166
188-239
261-312
AnGL27_0155132-84
102-153
191-242
269-320
345-396
423-474
AnGL27_0166842-92
102-153
AnGL27_01706222-273
AnGL27_0171941-91
101-152
AnGL27_0180140-90
AnGL27_0185835-87
108-161
185-238
260-313
AnGL27_0207722-72
79-130
AnGL27_0207933-83
104-155
183-236
AnGL27_02699339-390
413-465
489-541
565-617
640-692
711-763
AnGL27_03348341-393
413-467
AnGL27_0364169-110
123-172
FD-MS-7-8, AnGL9 AnGL9_0100790-140
FD-YE-37-9-3, AnGL29 AnGL29_01351322-375
AnGL29_0323657-111
Methylobacterium radiotolerans, GTSA1 PaGL#34_0294148-105
120-179
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00065208-258
PaGL#35_0042553-108
PaGL#35_03813219-270
Syntrophomonas erecta, GB-438 Ga0610585_0207940-90
124-174
338-388
Variovorax sp., EBFNA2 PaGL#33_0022231-85
PaGL#33_0228236-86
97-153
Variovorax paradoxus, 2u118 PaGL#32_0018831-85
PaGL#32_0350135-86
96-152
Maridesulfovibrio salexigens, AnGL23 AnGL23_00950323-380
Exiguobacterium mexicanum, AnGL24 AnGL24_0053150-101
120-171
189-240
AnGL24_0066040-90
110-163
666-717
AnGL24_0199839-89
AnGL24_0207135-86
465-514
AnGL24_0234152-107
AnGL24_0241798-149
173-223
259-310
341-392
AnGL24_0258139-90
AnGL24_0265740-88
Clostridium subterminale, CB-LS10-1 AnGL53_0016249-100
119-169
204-255
292-343
Priestia megaterium, 10L1 PaGL#57_0206344-94
113-163
183-233
253-303
PaGL#57_0042038-87
109-158
PaGL#57_01164193-251
PaGL#57_01244273-324
345-397
PaGL#57_0292236-85
PaGL#57_01424202-247
PaGL#57_0400753-105
119-171
192-243
PaGL#57_0441838-88
110-163
187-239
264-316
335-384
PaGL#57_06302364-420
PaGL#57_0695952-103
115-172
Variovorax paradoxus, SPNA7 PaGL#43_0018332-86
PaGL#43_0354035-86
96-152
PaGL#43_0439111-63
Methylorubrum populi, CTY4 PaGL#39_0036555-112
129-189
PaGL#39_0444035-92
Fictibacillus phosphorivorans, TY7 PaGL#38_0008336-86
104-157
179-230
PaGL#38_0186737-88
114-164
199-250
284-336
PaGL#38_04220222-274
Syntrophomonas wolfei, saponavida Swsap_0120346-98
Swsap_0130441-92
106-156
319-368
Swsap_0232546-98
110-158
315-362
Bacillus subtilis, 30VD-1 PaGL#66_0070855-107
PaGL#66_00727638-680
PaGL#66_0158538-88
111-161
188-239
265-317
PaGL#66_0332751-101
Peribacillus frigoritolerans, 30N-5 PaGL#67_00506637-687
PaGL#67_0098646-97
122-174
199-251
276-328
354-405
431-482
508-559
584-636
664-716
PaGL#67_0202239-90
111-162
194-244
267-319
344-393
Sphingomonas sp., CR2A3 PaGL#62_0109032-87
100-150
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00440116-167
392-444
466-518
540-592
614-666
684-735
AnGL54_0070737-88
104-155
178-229
253-304
AnGL54_00987258-316
AnGL54_0100419-70
80-128
AnGL54_0119140-92
103-154
AnGL54_0119438-92
112-164
179-233
245-298
312-362
AnGL54_0119955-106
131-183
AnGL54_0131339-89
109-162
189-242
AnGL54_0131439-89
AnGL54_0154458-102
AnGL54_01736310-359
AnGL54_0177456-108
130-182
202-254
276-328
345-396
AnGL54_0179949-99
117-168
188-242
AnGL54_02185307-357
AnGL54_0255533-84
104-155
174-225
AnGL54_02649100-151
548-601
614-667
676-730
AnGL54_0272058-110
134-185
212-264
290-341
362-413
AnGL54_0305949-115
AnGL54_0316214-66
82-134
AnGL54_0316338-89
102-153
170-221
237-289
AnGL54_0327333-85
100-152
187-239
249-300
AnGL54_0334955-107
129-180
197-248
AnGL54_0342738-90
97-149
Niallia taxi, AG-1 PaGL#37_0404484-136
151-203
PaGL#37_05856129-180
199-250
270-320
415-458
488-520
PaGL#37_0057751-104
PaGL#37_0117640-92
107-159
195-247
281-333
366-418
451-503
536-588
626-678
PaGL#37_02119153-204
224-275
PaGL#37_0281234-85
112-164
187-236
260-310
PaGL#37_03080616-666
MPOB, Sfum 639703145:Sfum_0244333-83
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01449119-169
Ga0128340_10929:Spalm_0145032-70
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11139:Swol_0013539-90
105-152
199-249
419-466
Ga0065332_111660:Swol_0162850-102
Ga0065332_111736:Swol_01704306-356
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12118:Szehn_01168168-217
Ga0124040_10576:Szehn_0048846-98
125-172
326-377
Szehn_0009040-97
Szehn_0009440-97
Mucilaginibacter gossypii, cycad 4 PaGL#42_04458198-247
Ruminococcus callidus, ATCC 27760 Rcal_01996192-243
Rcal_02934258-310
352-404

PF00188:CAP. Cysteine-rich secretory protein family

Found 99 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514709.1:LOMAGDGF_00515161-277
WP_003516353.1:LOMAGDGF_01489324-439
WP_003512484.1:LOMAGDGF_0198886-202
Clostridium acetobutylicum, DSM 1731 WP_010965528.1:FHOCHPCF_0226856-172
Acetivibrio alkalicellulosi, DSM 17461 2510060369:NJMEOJLD_00617326-431
2510061023:NJMEOJLD_01255126-233
2510061308:NJMEOJLD_01537157-273
2510061567:NJMEOJLD_01786589-694
2510062435:NJMEOJLD_0263383-199
2510063217:NJMEOJLD_034051251-1371
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936743.1:NEIHKHHH_03869164-280
WP_050754077.1:NEIHKHHH_0537982-199
WP_152966110.1:NEIHKHHH_05710271-389
Ruminococcus albus_7, DSM 20455 WP_013496884.1:HCIAFFOI_00130304-415
WP_013499241.1:HCIAFFOI_02721103-216
Paenibacillus guangzhouensis, KCTC 33171 WP_152392372.1:KDFAKKPF_00863139-246
WP_152394919.1:KDFAKKPF_03798144-250
WP_227793263.1:KDFAKKPF_03799125-231
WP_152396617.1:KDFAKKPF_0583387-213
Clostridium acetobutylicum, ATCC 824 WP_010965528.1:OJAMHIDJ_0227756-172
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697592.1:PROKKA_00652146-260
WP_137698184.1:PROKKA_0087182-198
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00915141-253
FD_25_22, AnGL7 AnGL7_0131474-202
FD_YE_37_3, AnGL26 AnGL26_0375996-202
FD_YE_37_9_2, AnGL4 AnGL4_01088339-447
AnGL4_0171650-164
Syntrophomonas curvata, Scurva Scurva_01520142-254
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00095141-253
Terrisporobacter hibernicus, AnGL54 AnGL54_00836215-327
AnGL54_01938164-280
FD-25-21, AnGL21 AnGL21_0125574-202
Sunxiuqinia elliptica, AnGL22 AnGL22_0375596-202
Paraclostridium benzoelyticum, AnGL27 AnGL27_01951215-330
AnGL27_02891163-279
FD-YE-37-9-3, AnGL29 AnGL29_01813339-447
AnGL29_0244150-164
Methylobacterium radiotolerans, GTSA1 PaGL#34_0304946-157
PaGL#34_0478945-153
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0514649-158
Syntrophomonas erecta, GB-438 Ga0610585_00915141-253
Dietzia cinnamea, 55 PaGL#56_0338092-195
PaGL#56_0045575-186
PaGL#56_0045682-204
PaGL#56_0045758-173
PaGL#56_0104059-178
Exiguobacterium mexicanum, AnGL24 AnGL24_00920191-299
AnGL24_02341189-303
Clostridium subterminale, CB-LS10-1 AnGL53_01517176-298
AnGL53_02209168-289
Priestia megaterium, 10L1 PaGL#57_01869131-245
PaGL#57_0113181-196
PaGL#57_0356388-204
PaGL#57_06069221-331
Methanospirillum lacunae, Ki8-1 MLKi8_01363167-309
MLKi8_01980163-304
MLKi8_02143290-434
Geodermatophilus sp., RDM14 PaGL#36_03686216-276
Methylorubrum populi, CTY4 PaGL#39_0090645-155
PaGL#39_0476154-162
Fictibacillus phosphorivorans, TY7 PaGL#38_0117093-209
PaGL#38_02153226-337
PaGL#38_02759148-252
PaGL#38_031766-115
Methanospirillum hungatei, GP1 MhGP1_01605169-310
MhGP1_02110169-302
MhGP1_02709305-447
Methanospirillum stamsii, Pt1 MLKi8_01979166-309
MLKi8_02664169-307
MLKi8_03010305-448
Syntrophomonas wolfei, saponavida Swsap_01203120-232
Swsap_01564146-255
Bacillus subtilis, 30VD-1 PaGL#66_02636245-355
PaGL#66_02735141-253
Peribacillus frigoritolerans, 30N-5 PaGL#67_01721260-370
PaGL#67_02685152-265
PaGL#67_0294789-206
PaGL#67_04100230-340
Micromonospora inositola, Utrum1 PaGL#61_01650320-434
Sphingomonas sp., CR2A3 PaGL#62_0000392-211
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01566215-327
AnGL54_02742164-280
Niallia taxi, AG-1 PaGL#37_0104280-192
PaGL#37_01290229-340
PaGL#37_01909258-369
PaGL#37_02152144-256
PaGL#37_02392171-284
Methanospirillum.hungatei GP1, MhGP1 8064046820:MhGP1_00194305-447
8064047438:MhGP1_00793169-302
8064047953:MhGP1_01297169-310
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1187:Mhun_00087170-309
Ga0065338_111342:Mhun_01343171-302
Ga0065338_111797:Mhun_01799305-448
MPOB, Sfum 639703621:Sfum_0292562-166
Syntrophus aciditrophicus, SB 637859204:SYN_0083567-216
Mucilaginibacter gossypii, cycad 4 PaGL#42_0080550-148
Ruminococcus callidus, ATCC 27760 Rcal_0069444-155
Rcal_0265567-204
Rcal_0293873-210
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