SMPP Home

MLKi8_03051 Locus tags: • Sequence Length: 802

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850
Show complete sequence
Click domain (colored bar) to show sequence
MLKi8_03046 MLKi8_03047 MLKi8_03048 MLKi8_03050 MLKi8_03053 MLKi8_03054 MLKi8_03055 MLKi8_03056 
    [PF03551]_[PF03709]_[PF01276]_[PF03711]

    [13:PF03551]_[21:PF03709]_[148:PF01276]_[626:PF03711]

    [9:IPR036390]_[13:IPR005149]_[21:IPR005308]_[148:IPR000310]_[148:IPR000310]_[148:IPR015424]_[623:IPR036633]_[626:IPR008286]

Looking for similar signatures in the working genomes

PF03551:PadR. Transcriptional regulator PadR-like family

Found 199 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517785.1:LOMAGDGF_0233017-85
WP_014522634.1:LOMAGDGF_0233229-103
WP_003521369.1:LOMAGDGF_026488-83
WP_003513888.1:LOMAGDGF_0267414-88
Clostridium acetobutylicum, DSM 1731 WP_014519111.1:FHOCHPCF_039087-82
WP_010890837.1:FHOCHPCF_0395415-88
WP_014518846.1:FHOCHPCF_005765-80
WP_010963892.1:FHOCHPCF_0061813-82
WP_010964150.1:FHOCHPCF_008785-80
WP_010964267.1:FHOCHPCF_0099748-121
WP_013913615.1:FHOCHPCF_034237-81
Acetivibrio alkalicellulosi, DSM 17461 2510063563:NJMEOJLD_0374113-78
2510063848:NJMEOJLD_0402315-89
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943963.1:NEIHKHHH_0057215-89
WP_036945601.1:NEIHKHHH_009449-82
WP_036944507.1:NEIHKHHH_0250722-92
WP_036944590.1:NEIHKHHH_0284656-119
WP_050753564.1:NEIHKHHH_034956-80
WP_036936502.1:NEIHKHHH_0399114-88
WP_036937607.1:NEIHKHHH_0420010-83
WP_036935750.1:NEIHKHHH_0465310-81
WP_036935300.1:NEIHKHHH_049216-81
Ruminococcus albus_7, DSM 20455 WP_242837685.1:HCIAFFOI_0307313-83
Paenibacillus guangzhouensis, KCTC 33171 WP_227793528.1:KDFAKKPF_020936-80
WP_152393514.1:KDFAKKPF_0218027-98
WP_152393575.1:KDFAKKPF_0225013-87
WP_152393615.1:KDFAKKPF_0229615-89
WP_152393786.1:KDFAKKPF_024887-80
WP_152393793.1:KDFAKKPF_0249515-86
WP_152394021.1:KDFAKKPF_027476-82
WP_193726931.1:KDFAKKPF_0298315-88
WP_152394600.1:KDFAKKPF_0343214-88
WP_152396467.1:KDFAKKPF_056516-78
Clostridium acetobutylicum, ATCC 824 WP_014518846.1:OJAMHIDJ_005775-80
WP_010963892.1:OJAMHIDJ_0061913-82
WP_010964150.1:OJAMHIDJ_008815-80
WP_010964267.1:OJAMHIDJ_0100048-121
WP_010966641.1:OJAMHIDJ_034347-81
WP_014519111.1:OJAMHIDJ_039217-82
WP_010890837.1:OJAMHIDJ_0396715-88
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696692.1:PROKKA_0270922-83
FD_SO4_25_1_F22, AnGL30 AnGL30_0065117-82
FD_YE_25_21, AnGL21 AnGL21_029056-81
FD_YE_37_3, AnGL26 AnGL26_0079321-93
AnGL26_0167814-86
AnGL26_0180718-86
AnGL26_0377216-90
FD_YE_37_8_2, AnGL3 AnGL3_0234018-89
FD_YE_37_9_2, AnGL4 AnGL4_0214620-90
Syntrophomonas curvata, Scurva Scurva_004545-79
Scurva_0078416-88
Scurva_019156-78
Syntrophomonas wolfei methylbutyratica, Swm Swm_0062716-89
Swm_0063817-91
Terrisporobacter hibernicus, AnGL54 AnGL54_0458115-87
AnGL54_0105215-90
AnGL54_0117013-86
AnGL54_0164621-84
AnGL54_0174313-82
AnGL54_0181713-86
AnGL54_0196113-83
AnGL54_0230814-85
AnGL54_0253114-86
AnGL54_0336627-90
AnGL54_0381415-88
AnGL54_0395315-88
Sunxiuqinia elliptica, AnGL22 AnGL22_0079421-93
AnGL22_0167514-86
AnGL22_0180418-86
AnGL22_0376816-90
Paraclostridium benzoelyticum, AnGL27 AnGL27_0023517-88
AnGL27_0025016-89
AnGL27_0025819-82
AnGL27_0162721-93
AnGL27_0296513-82
FD-YE-37-9-3, AnGL29 AnGL29_0287120-90
Methylobacterium radiotolerans, GTSA1 PaGL#34_0183070-139
PaGL#34_0287914-84
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0059118-89
Variovorax sp., EBFNA2 PaGL#33_0419952-123
Variovorax paradoxus, 2u118 PaGL#32_0369259-130
Dietzia cinnamea, 55 PaGL#56_003466-80
PaGL#56_0035628-92
PaGL#56_032485-86
Maridesulfovibrio salexigens, AnGL23 AnGL23_0233317-90
Exiguobacterium mexicanum, AnGL24 AnGL24_0026813-84
AnGL24_017776-79
AnGL24_0234817-87
AnGL24_0272419-87
AnGL24_0285914-86
Clostridium subterminale, CB-LS10-1 AnGL53_0026815-90
AnGL53_0067415-89
AnGL53_0122321-85
AnGL53_0161026-96
AnGL53_0192619-87
AnGL53_0206415-90
AnGL53_0225114-88
AnGL53_0249854-125
AnGL53_0267013-82
AnGL53_0277215-88
AnGL53_0279115-87
Priestia megaterium, 10L1 PaGL#57_008266-80
PaGL#57_0378313-82
PaGL#57_0415219-88
PaGL#57_045506-82
PaGL#57_0465615-86
PaGL#57_048769-83
PaGL#57_0511718-92
PaGL#57_0621631-102
PaGL#57_068477-81
Variovorax paradoxus, SPNA7 PaGL#43_0373349-120
Methanospirillum lacunae, Ki8-1 MLKi8_0175510-85
MLKi8_0312313-78
MLKi8_0314719-84
Geodermatophilus sp., RDM14 PaGL#36_001035-90
PaGL#36_0169874-142
PaGL#36_032776-80
PaGL#36_042026-78
Fictibacillus phosphorivorans, TY7 PaGL#38_0103117-86
PaGL#38_0318315-90
Methanospirillum hungatei, GP1 MhGP1_0041419-84
MhGP1_013854-80
MhGP1_025072-67
Methanospirillum stamsii, Pt1 MLKi8_0010521-89
MLKi8_0056030-95
MLKi8_0226657-133
MLKi8_0305113-81
Syntrophomonas wolfei, saponavida Swsap_028726-80
Swsap_0290317-91
Swsap_0338215-89
Bacillus subtilis, 30VD-1 PaGL#66_0306222-95
PaGL#66_033487-81
Peribacillus frigoritolerans, 30N-5 PaGL#67_0099718-90
PaGL#67_010346-82
PaGL#67_0171713-86
PaGL#67_0309218-86
PaGL#67_03164157-222
PaGL#67_0494413-84
PaGL#67_0512615-87
Micromonospora inositola, Utrum1 PaGL#61_001790-75
PaGL#61_003247-81
PaGL#61_005026-80
PaGL#61_0098513-86
PaGL#61_010222-79
PaGL#61_0107613-89
PaGL#61_0109514-86
PaGL#61_0115412-83
PaGL#61_013282-76
PaGL#61_0171358-129
PaGL#61_017456-77
PaGL#61_0240426-90
PaGL#61_029365-79
PaGL#61_0329318-92
PaGL#61_0329815-93
PaGL#61_035604-80
PaGL#61_0377513-85
PaGL#61_0406912-85
PaGL#61_045289-82
PaGL#61_0549918-80
PaGL#61_0610913-83
PaGL#61_0650918-63
PaGL#61_0652814-89
Sphingomonas sp., CR2A3 PaGL#62_0005558-128
PaGL#62_0277021-91
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0019627-90
AnGL54_0064415-88
AnGL54_0078215-88
AnGL54_0141015-87
AnGL54_0178015-90
AnGL54_0189813-86
AnGL54_0245121-84
AnGL54_0254713-82
AnGL54_0262113-86
AnGL54_0276413-83
AnGL54_0311114-85
AnGL54_0333514-86
Niallia taxi, AG-1 PaGL#37_0412111-85
PaGL#37_041748-84
PaGL#37_042016-79
PaGL#37_0024313-83
PaGL#37_0427818-83
PaGL#37_045496-79
PaGL#37_0471016-82
PaGL#37_0472753-122
PaGL#37_0515910-84
PaGL#37_0528741-113
PaGL#37_0198114-86
PaGL#37_0217314-88
PaGL#37_0366315-89
Methanospirillum.hungatei GP1, MhGP1 8064047030:MhGP1_003962-67
8064048179:MhGP1_015184-80
8064049168:MhGP1_0248819-84
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111661:Mhun_0166213-78
Ga0065338_112277:Mhun_0227421-91
Ga0065338_112488:Mhun_0248619-84
MPOB, Sfum 639701031:Sfum_0028924-96
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1202:Szehn_0109613-83
Mucilaginibacter gossypii, cycad 4 PaGL#42_0520118-89
Ruminococcus callidus, ATCC 27760 Rcal_0002014-83

PF03709:OKR_DC_1_N. Orn/Lys/Arg decarboxylase, N-terminal domain

Found 7 similar signatures
Methylobacterium radiotolerans, GTSA1 PaGL#34_0484820-136
Variovorax sp., EBFNA2 PaGL#33_0315619-143
Variovorax paradoxus, 2u118 PaGL#32_0280219-143
Variovorax paradoxus, SPNA7 PaGL#43_0290819-143
Methanospirillum lacunae, Ki8-1 MLKi8_0305121-142
Methylorubrum populi, CTY4 PaGL#39_0081420-136
Methanospirillum stamsii, Pt1 MLKi8_0239825-133

PF01276:OKR_DC_1. Orn/Lys/Arg decarboxylase, major domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513882.1:LOMAGDGF_026719-372
WP_003514219.1:LOMAGDGF_028513-306
Clostridium acetobutylicum, DSM 1731 WP_010963620.1:FHOCHPCF_003403-361
WP_010965635.1:FHOCHPCF_023708-373
Acetivibrio alkalicellulosi, DSM 17461 2510061497:NJMEOJLD_017208-371
2510063139:NJMEOJLD_033266-301
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853171.1:NEIHKHHH_024634-299
WP_036937115.1:NEIHKHHH_044848-372
Ruminococcus albus_7, DSM 20455 WP_242837722.1:HCIAFFOI_012638-322
WP_242843393.1:HCIAFFOI_028453-282
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_000535-360
Ga0065332_111447:GJLLLGJL_014175-320
Paenibacillus guangzhouensis, KCTC 33171 WP_152392264.1:KDFAKKPF_007335-372
WP_152395795.1:KDFAKKPF_048839-387
Clostridium acetobutylicum, ATCC 824 WP_010963620.1:OJAMHIDJ_003403-361
WP_010965635.1:OJAMHIDJ_023808-373
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697239.1:PROKKA_002155-297
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0217716-372
FD_YE_37_9_2, AnGL4 AnGL4_017390-264
Syntrophomonas curvata, Scurva Scurva_000534-304
Scurva_005095-319
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0139516-372
Sespor_0178577-393
Syntrophomonas wolfei methylbutyratica, Swm Swm_000485-362
Swm_015705-320
Terrisporobacter hibernicus, AnGL54 AnGL54_0242015-377
AnGL54_0334010-301
Paraclostridium benzoelyticum, AnGL27 AnGL27_008112-302
AnGL27_0161323-386
FD-YE-37-9-3, AnGL29 AnGL29_024640-264
Methylobacterium radiotolerans, GTSA1 PaGL#34_04848141-606
Syntrophomonas erecta, GB-438 Ga0610585_0217716-372
Variovorax sp., EBFNA2 PaGL#33_03156148-600
Variovorax paradoxus, 2u118 PaGL#32_02802148-596
Exiguobacterium mexicanum, AnGL24 AnGL24_0114610-374
AnGL24_0305011-286
Clostridium subterminale, CB-LS10-1 AnGL53_001104-371
AnGL53_009138-372
Priestia megaterium, 10L1 PaGL#57_022145-311
PaGL#57_060956-371
Variovorax paradoxus, SPNA7 PaGL#43_02908148-596
Methanospirillum lacunae, Ki8-1 MLKi8_03051148-601
Geodermatophilus sp., RDM14 PaGL#36_0244512-298
Methylorubrum populi, CTY4 PaGL#39_00814141-610
Fictibacillus phosphorivorans, TY7 PaGL#38_004144-304
PaGL#38_021265-369
Methanospirillum stamsii, Pt1 MLKi8_02398138-589
Syntrophomonas wolfei, saponavida Swsap_007988-369
Swsap_0123117-282
Bacillus subtilis, 30VD-1 PaGL#66_001562-362
PaGL#66_026695-370
Peribacillus frigoritolerans, 30N-5 PaGL#67_002435-301
PaGL#67_041355-370
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0017010-301
AnGL54_0322415-377
Niallia taxi, AG-1 PaGL#37_000354-303
PaGL#37_012775-370
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_015607-321
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_000535-360
Ga0065332_111447:Swol_014175-320
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1455:Szehn_024345-359
Ruminococcus callidus, ATCC 27760 Rcal_002692-289
Rcal_011128-321

PF03711:OKR_DC_1_C. Orn/Lys/Arg decarboxylase, C-terminal domain

Found 62 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513882.1:LOMAGDGF_02671402-471
WP_003514219.1:LOMAGDGF_02851411-458
Clostridium acetobutylicum, DSM 1731 WP_010963620.1:FHOCHPCF_00340369-451
WP_010965635.1:FHOCHPCF_02370405-467
Acetivibrio alkalicellulosi, DSM 17461 2510061497:NJMEOJLD_01720372-468
2510063139:NJMEOJLD_03326414-465
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853171.1:NEIHKHHH_02463406-459
WP_036937115.1:NEIHKHHH_04484373-468
Ruminococcus albus_7, DSM 20455 WP_242837722.1:HCIAFFOI_01263399-462
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00053415-464
Ga0065332_111447:GJLLLGJL_01417369-459
Paenibacillus guangzhouensis, KCTC 33171 WP_152392264.1:KDFAKKPF_00733377-461
WP_152395795.1:KDFAKKPF_04883438-498
Clostridium acetobutylicum, ATCC 824 WP_010963620.1:OJAMHIDJ_00340369-451
WP_010965635.1:OJAMHIDJ_02380405-467
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697239.1:PROKKA_00215394-492
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02177405-469
FD_YE_37_9_2, AnGL4 AnGL4_01739349-447
Syntrophomonas curvata, Scurva Scurva_00053394-461
Scurva_00509369-463
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01395405-469
Sespor_01785448-532
Syntrophomonas wolfei methylbutyratica, Swm Swm_00048403-461
Swm_01570369-459
Terrisporobacter hibernicus, AnGL54 AnGL54_02420403-474
AnGL54_03340368-445
Paraclostridium benzoelyticum, AnGL27 AnGL27_00811361-448
AnGL27_01613420-480
FD-YE-37-9-3, AnGL29 AnGL29_02464349-447
Methylobacterium radiotolerans, GTSA1 PaGL#34_04848631-763
Syntrophomonas erecta, GB-438 Ga0610585_02177405-469
Variovorax sp., EBFNA2 PaGL#33_03156626-751
Variovorax paradoxus, 2u118 PaGL#32_02802622-747
Exiguobacterium mexicanum, AnGL24 AnGL24_01146374-469
AnGL24_03050401-444
Clostridium subterminale, CB-LS10-1 AnGL53_00110374-458
AnGL53_00913409-467
Priestia megaterium, 10L1 PaGL#57_02214406-459
PaGL#57_06095378-460
Variovorax paradoxus, SPNA7 PaGL#43_02908622-747
Methanospirillum lacunae, Ki8-1 MLKi8_03051626-754
Geodermatophilus sp., RDM14 PaGL#36_02445390-444
Methylorubrum populi, CTY4 PaGL#39_00814635-768
Fictibacillus phosphorivorans, TY7 PaGL#38_00414359-461
PaGL#38_02126404-460
Methanospirillum stamsii, Pt1 MLKi8_02398616-744
Syntrophomonas wolfei, saponavida Swsap_00798370-465
Swsap_01231370-445
Bacillus subtilis, 30VD-1 PaGL#66_00156407-451
PaGL#66_02669378-456
Peribacillus frigoritolerans, 30N-5 PaGL#67_00243405-457
PaGL#67_04135377-460
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00170368-445
AnGL54_03224403-474
Niallia taxi, AG-1 PaGL#37_00035406-456
PaGL#37_01277397-460
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109138:Spalm_0155919-105
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00053415-464
Ga0065332_111447:Swol_01417369-459
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1455:Szehn_02434408-457
Ruminococcus callidus, ATCC 27760 Rcal_00269388-424
Rcal_01112400-462
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA