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MLKi8_03123 Locus tags: • Sequence Length: 385

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400
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MLKi8_03118 MLKi8_03119 MLKi8_03120 MLKi8_03121 MLKi8_03123 MLKi8_03124 MLKi8_03126 MLKi8_03127 
    [PF03551]_[PF01207]

    [13:PF03551]_[97:PF01207]

    [9:IPR036390]_[13:IPR005149]_[16:IPR037347]_[97:IPR035587]

Looking for similar signatures in the working genomes

PF03551:PadR. Transcriptional regulator PadR-like family

Found 199 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517785.1:LOMAGDGF_0233017-85
WP_014522634.1:LOMAGDGF_0233229-103
WP_003521369.1:LOMAGDGF_026488-83
WP_003513888.1:LOMAGDGF_0267414-88
Clostridium acetobutylicum, DSM 1731 WP_014519111.1:FHOCHPCF_039087-82
WP_010890837.1:FHOCHPCF_0395415-88
WP_014518846.1:FHOCHPCF_005765-80
WP_010963892.1:FHOCHPCF_0061813-82
WP_010964150.1:FHOCHPCF_008785-80
WP_010964267.1:FHOCHPCF_0099748-121
WP_013913615.1:FHOCHPCF_034237-81
Acetivibrio alkalicellulosi, DSM 17461 2510063563:NJMEOJLD_0374113-78
2510063848:NJMEOJLD_0402315-89
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943963.1:NEIHKHHH_0057215-89
WP_036945601.1:NEIHKHHH_009449-82
WP_036944507.1:NEIHKHHH_0250722-92
WP_036944590.1:NEIHKHHH_0284656-119
WP_050753564.1:NEIHKHHH_034956-80
WP_036936502.1:NEIHKHHH_0399114-88
WP_036937607.1:NEIHKHHH_0420010-83
WP_036935750.1:NEIHKHHH_0465310-81
WP_036935300.1:NEIHKHHH_049216-81
Ruminococcus albus_7, DSM 20455 WP_242837685.1:HCIAFFOI_0307313-83
Paenibacillus guangzhouensis, KCTC 33171 WP_227793528.1:KDFAKKPF_020936-80
WP_152393514.1:KDFAKKPF_0218027-98
WP_152393575.1:KDFAKKPF_0225013-87
WP_152393615.1:KDFAKKPF_0229615-89
WP_152393786.1:KDFAKKPF_024887-80
WP_152393793.1:KDFAKKPF_0249515-86
WP_152394021.1:KDFAKKPF_027476-82
WP_193726931.1:KDFAKKPF_0298315-88
WP_152394600.1:KDFAKKPF_0343214-88
WP_152396467.1:KDFAKKPF_056516-78
Clostridium acetobutylicum, ATCC 824 WP_014518846.1:OJAMHIDJ_005775-80
WP_010963892.1:OJAMHIDJ_0061913-82
WP_010964150.1:OJAMHIDJ_008815-80
WP_010964267.1:OJAMHIDJ_0100048-121
WP_010966641.1:OJAMHIDJ_034347-81
WP_014519111.1:OJAMHIDJ_039217-82
WP_010890837.1:OJAMHIDJ_0396715-88
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696692.1:PROKKA_0270922-83
FD_SO4_25_1_F22, AnGL30 AnGL30_0065117-82
FD_YE_25_21, AnGL21 AnGL21_029056-81
FD_YE_37_3, AnGL26 AnGL26_0079321-93
AnGL26_0167814-86
AnGL26_0180718-86
AnGL26_0377216-90
FD_YE_37_8_2, AnGL3 AnGL3_0234018-89
FD_YE_37_9_2, AnGL4 AnGL4_0214620-90
Syntrophomonas curvata, Scurva Scurva_004545-79
Scurva_0078416-88
Scurva_019156-78
Syntrophomonas wolfei methylbutyratica, Swm Swm_0062716-89
Swm_0063817-91
Terrisporobacter hibernicus, AnGL54 AnGL54_0458115-87
AnGL54_0105215-90
AnGL54_0117013-86
AnGL54_0164621-84
AnGL54_0174313-82
AnGL54_0181713-86
AnGL54_0196113-83
AnGL54_0230814-85
AnGL54_0253114-86
AnGL54_0336627-90
AnGL54_0381415-88
AnGL54_0395315-88
Sunxiuqinia elliptica, AnGL22 AnGL22_0079421-93
AnGL22_0167514-86
AnGL22_0180418-86
AnGL22_0376816-90
Paraclostridium benzoelyticum, AnGL27 AnGL27_0023517-88
AnGL27_0025016-89
AnGL27_0025819-82
AnGL27_0162721-93
AnGL27_0296513-82
FD-YE-37-9-3, AnGL29 AnGL29_0287120-90
Methylobacterium radiotolerans, GTSA1 PaGL#34_0183070-139
PaGL#34_0287914-84
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0059118-89
Variovorax sp., EBFNA2 PaGL#33_0419952-123
Variovorax paradoxus, 2u118 PaGL#32_0369259-130
Dietzia cinnamea, 55 PaGL#56_003466-80
PaGL#56_0035628-92
PaGL#56_032485-86
Maridesulfovibrio salexigens, AnGL23 AnGL23_0233317-90
Exiguobacterium mexicanum, AnGL24 AnGL24_0026813-84
AnGL24_017776-79
AnGL24_0234817-87
AnGL24_0272419-87
AnGL24_0285914-86
Clostridium subterminale, CB-LS10-1 AnGL53_0026815-90
AnGL53_0067415-89
AnGL53_0122321-85
AnGL53_0161026-96
AnGL53_0192619-87
AnGL53_0206415-90
AnGL53_0225114-88
AnGL53_0249854-125
AnGL53_0267013-82
AnGL53_0277215-88
AnGL53_0279115-87
Priestia megaterium, 10L1 PaGL#57_008266-80
PaGL#57_0378313-82
PaGL#57_0415219-88
PaGL#57_045506-82
PaGL#57_0465615-86
PaGL#57_048769-83
PaGL#57_0511718-92
PaGL#57_0621631-102
PaGL#57_068477-81
Variovorax paradoxus, SPNA7 PaGL#43_0373349-120
Methanospirillum lacunae, Ki8-1 MLKi8_0175510-85
MLKi8_0312313-78
MLKi8_0314719-84
Geodermatophilus sp., RDM14 PaGL#36_001035-90
PaGL#36_0169874-142
PaGL#36_032776-80
PaGL#36_042026-78
Fictibacillus phosphorivorans, TY7 PaGL#38_0103117-86
PaGL#38_0318315-90
Methanospirillum hungatei, GP1 MhGP1_0041419-84
MhGP1_013854-80
MhGP1_025072-67
Methanospirillum stamsii, Pt1 MLKi8_0010521-89
MLKi8_0056030-95
MLKi8_0226657-133
MLKi8_0305113-81
Syntrophomonas wolfei, saponavida Swsap_028726-80
Swsap_0290317-91
Swsap_0338215-89
Bacillus subtilis, 30VD-1 PaGL#66_0306222-95
PaGL#66_033487-81
Peribacillus frigoritolerans, 30N-5 PaGL#67_0099718-90
PaGL#67_010346-82
PaGL#67_0171713-86
PaGL#67_0309218-86
PaGL#67_03164157-222
PaGL#67_0494413-84
PaGL#67_0512615-87
Micromonospora inositola, Utrum1 PaGL#61_001790-75
PaGL#61_003247-81
PaGL#61_005026-80
PaGL#61_0098513-86
PaGL#61_010222-79
PaGL#61_0107613-89
PaGL#61_0109514-86
PaGL#61_0115412-83
PaGL#61_013282-76
PaGL#61_0171358-129
PaGL#61_017456-77
PaGL#61_0240426-90
PaGL#61_029365-79
PaGL#61_0329318-92
PaGL#61_0329815-93
PaGL#61_035604-80
PaGL#61_0377513-85
PaGL#61_0406912-85
PaGL#61_045289-82
PaGL#61_0549918-80
PaGL#61_0610913-83
PaGL#61_0650918-63
PaGL#61_0652814-89
Sphingomonas sp., CR2A3 PaGL#62_0005558-128
PaGL#62_0277021-91
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0019627-90
AnGL54_0064415-88
AnGL54_0078215-88
AnGL54_0141015-87
AnGL54_0178015-90
AnGL54_0189813-86
AnGL54_0245121-84
AnGL54_0254713-82
AnGL54_0262113-86
AnGL54_0276413-83
AnGL54_0311114-85
AnGL54_0333514-86
Niallia taxi, AG-1 PaGL#37_0412111-85
PaGL#37_041748-84
PaGL#37_042016-79
PaGL#37_0024313-83
PaGL#37_0427818-83
PaGL#37_045496-79
PaGL#37_0471016-82
PaGL#37_0472753-122
PaGL#37_0515910-84
PaGL#37_0528741-113
PaGL#37_0198114-86
PaGL#37_0217314-88
PaGL#37_0366315-89
Methanospirillum.hungatei GP1, MhGP1 8064047030:MhGP1_003962-67
8064048179:MhGP1_015184-80
8064049168:MhGP1_0248819-84
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111661:Mhun_0166213-78
Ga0065338_112277:Mhun_0227421-91
Ga0065338_112488:Mhun_0248619-84
MPOB, Sfum 639701031:Sfum_0028924-96
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1202:Szehn_0109613-83
Mucilaginibacter gossypii, cycad 4 PaGL#42_0520118-89
Ruminococcus callidus, ATCC 27760 Rcal_0002014-83

PF01207:Dus. Dihydrouridine synthase (Dus)

Found 99 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512807.1:LOMAGDGF_0028913-315
Clostridium acetobutylicum, DSM 1731 WP_010966475.1:FHOCHPCF_0324913-309
WP_010966723.1:FHOCHPCF_035085-292
Acetivibrio alkalicellulosi, DSM 17461 2510063109:NJMEOJLD_0329717-313
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944237.1:NEIHKHHH_0125118-308
WP_036943830.1:NEIHKHHH_014014-297
WP_036942848.1:NEIHKHHH_0271913-309
Ruminococcus albus_7, DSM 20455 WP_013499599.1:HCIAFFOI_0311416-314
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0012014-311
Paenibacillus guangzhouensis, KCTC 33171 WP_152395742.1:KDFAKKPF_0481814-318
Clostridium acetobutylicum, ATCC 824 WP_010966475.1:OJAMHIDJ_0325813-309
WP_010966723.1:OJAMHIDJ_035205-292
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697526.1:PROKKA_0057613-313
WP_137698067.1:PROKKA_008364-279
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0209414-310
FD_25_22, AnGL7 AnGL7_0060112-316
AnGL7_022243-307
AnGL7_0316013-317
FD_25_27, AnGL8 AnGL8_0156414-326
AnGL8_0294012-316
FD_MS_7_1, AnGL28 AnGL28_019828-265
AnGL28_0292013-320
AnGL28_0293118-292
FD_SO4_25_1_F22, AnGL30 AnGL30_0104614-315
AnGL30_018628-228
FD_SO4_37_1, AnGL2 AnGL2_011118-265
AnGL2_0204913-320
AnGL2_0206018-292
FD_YE_25_21, AnGL21 AnGL21_0026924-333
AnGL21_0090717-305
AnGL21_029640-279
FD_YE_37_3, AnGL26 AnGL26_0184014-318
AnGL26_0196723-308
AnGL26_0412114-319
FD_YE_37_8_2, AnGL3 AnGL3_000675-293
AnGL3_0021115-325
AnGL3_0234714-321
FD_YE_37_9_2, AnGL4 AnGL4_0093613-313
Syntrophus buswellii, Sbus Sbus_0214624-330
Syntrophomonas curvata, Scurva Scurva_0020415-315
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0147814-310
Syntrophomonas wolfei methylbutyratica, Swm Swm_0012014-310
Terrisporobacter hibernicus, AnGL54 AnGL54_0308413-314
FD-25-21, AnGL21 AnGL21_003803-307
AnGL21_0200712-316
AnGL21_0307713-317
Sunxiuqinia elliptica, AnGL22 AnGL22_0183714-318
AnGL22_0196423-308
AnGL22_0411714-319
Paraclostridium benzoelyticum, AnGL27 AnGL27_0050413-314
FD-MS-7-8, AnGL9 AnGL9_021410-270
AnGL9_0310813-315
AnGL9_0311818-290
FD-YE-37-9-3, AnGL29 AnGL29_0166113-313
Methylobacterium radiotolerans, GTSA1 PaGL#34_022130-303
PaGL#34_0242427-301
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0057816-315
Syntrophomonas erecta, GB-438 Ga0610585_0209414-310
Variovorax sp., EBFNA2 PaGL#33_0378514-315
PaGL#33_0525715-319
Variovorax paradoxus, 2u118 PaGL#32_0212716-317
PaGL#32_0458915-317
Dietzia cinnamea, 55 PaGL#56_0077024-338
Maridesulfovibrio salexigens, AnGL23 AnGL23_0206212-313
AnGL23_0287432-293
Exiguobacterium mexicanum, AnGL24 AnGL24_0228814-318
AnGL24_0300816-317
Clostridium subterminale, CB-LS10-1 AnGL53_0340713-313
Priestia megaterium, 10L1 PaGL#57_0229614-320
Variovorax paradoxus, SPNA7 PaGL#43_023890-298
PaGL#43_0472615-317
Methanospirillum lacunae, Ki8-1 MLKi8_02882120-235
Geodermatophilus sp., RDM14 PaGL#36_0157020-325
Methylorubrum populi, CTY4 PaGL#39_0076517-326
PaGL#39_0252624-327
Fictibacillus phosphorivorans, TY7 PaGL#38_0046913-314
PaGL#38_0075015-316
Methanospirillum hungatei, GP1 MhGP1_02457105-235
Methanospirillum stamsii, Pt1 MLKi8_0312397-250
Syntrophomonas wolfei, saponavida Swsap_0129314-315
Bacillus subtilis, 30VD-1 PaGL#66_0010114-320
PaGL#66_0337815-318
Peribacillus frigoritolerans, 30N-5 PaGL#67_0018514-313
PaGL#67_0357914-314
Micromonospora inositola, Utrum1 PaGL#61_0570724-333
Sphingomonas sp., CR2A3 PaGL#62_0093719-320
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0388713-314
Niallia taxi, AG-1 PaGL#37_0009114-315
PaGL#37_0152915-321
Methanospirillum.hungatei GP1, MhGP1 8064047080:MhGP1_00446105-235
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111560:Mhun_01561120-236
MPOB, Sfum 639702580:Sfum_0186425-309
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10950:Spalm_0147115-317
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0012014-311
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_10561:Szehn_0047314-313
Syntrophus aciditrophicus, SB 637859041:SYN_0068513-319
Syntrophus gentianae, DSM8423 Ga0074853_13910:Sgen_0309624-329
Mucilaginibacter gossypii, cycad 4 PaGL#42_0515016-318
Ruminococcus callidus, ATCC 27760 Rcal_0211119-326
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