Cellulosome Database Gene Detail

AnGL54_04203 Locus tags: • Sequence Length: 289

Terrisporobacter hibernicus, CB-LS-10-2 Batch4_genome_fasta/bc2038

Show complete sequence

Click domain (colored bar) to show sequence

    [PF02645]_[PF00313]

    [1:PF02645]_[2:PF00313]

    [0:IPR002059]_[0:IPR012340]_[1:IPR003797]_[1:IPR003797]_[2:IPR011129]_[2:IPR002059]_[3:IPR002059]_[3:IPR002059]_[23:IPR002059]_[38:IPR002059]

Looking for similar signatures in the working genomes

PF02645:DegV. Uncharacterised protein, DegV family COG1307

Found 136 similar signatures

Clostridium acetobutylicum, DSM 1731	WP_010964020.1:FHOCHPCF_00747	2-278
	WP_010964266.1:FHOCHPCF_00996	2-280
	WP_010964932.1:FHOCHPCF_01670	2-279
	WP_010966558.1:FHOCHPCF_03337	2-280
Ruminococcus albus_7, DSM 20455	WP_013499767.1:HCIAFFOI_03291	2-285
	WP_013499471.1:HCIAFFOI_02984	7-283
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_11467:GJLLLGJL_00454	13-286
	GJLLLGJL_01076	2-282
	GJLLLGJL_01568	3-279
	Ga0065332_112028:GJLLLGJL_01989	3-280
Paenibacillus guangzhouensis, KCTC 33171	WP_152392327.1:KDFAKKPF_00806	3-286
	WP_152394100.1:KDFAKKPF_02840	27-300
	WP_152394702.1:KDFAKKPF_03550	3-280
Clostridium acetobutylicum, ATCC 824	WP_010964020.1:OJAMHIDJ_00749	2-278
	WP_010964266.1:OJAMHIDJ_00999	2-280
	WP_010964932.1:OJAMHIDJ_01676	2-279
	WP_010966558.1:OJAMHIDJ_03347	2-280
Syntrophomonas erecta, DSM 16215	OINOEOOJ_00100	2-279
	OINOEOOJ_00434	3-276
	OINOEOOJ_01557	5-290
	OINOEOOJ_01777	2-283
	OINOEOOJ_02469	2-279
	OINOEOOJ_02476	3-279
FD_SO4_25_1_F22, AnGL30	AnGL30_01427	315-596
FD_YE_37_9_2, AnGL4	AnGL4_00366	1-280
	AnGL4_01431	2-279
	AnGL4_02033	1-263
	AnGL4_02163	311-591
	AnGL4_02258	2-283
	AnGL4_02489	2-285
Syntrophomonas curvata, Scurva	Scurva_00636	1-276
	Scurva_00862	4-277
	Scurva_00906	2-276
	Scurva_01549	2-283
	Scurva_02074	3-281
	Scurva_02509	2-280
	Scurva_02711	3-289
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_00569	3-276
	Sespor_00906	2-279
	Sespor_01039	3-279
	Sespor_01048	2-279
	Sespor_01860	2-283
	Sespor_02079	5-290
Syntrophomonas wolfei methylbutyratica, Swm	Swm_00361	9-289
	Swm_00482	2-275
	Swm_01192	2-282
	Swm_01731	3-279
	Swm_02298	3-281
Terrisporobacter hibernicus, AnGL54	AnGL54_04203	1-274
	AnGL54_04180	2-276
	AnGL54_00915	2-281
	AnGL54_01988	1-277
	AnGL54_02171	3-280
	AnGL54_02315	3-278
	AnGL54_02319	4-284
	AnGL54_02906	3-280
Paraclostridium benzoelyticum, AnGL27	AnGL27_00972	4-281
	AnGL27_01569	1-275
	AnGL27_02024	2-279
	AnGL27_02659	3-279
	AnGL27_02853	2-281
	AnGL27_02858	3-278
	AnGL27_02983	3-275
FD-YE-37-9-3, AnGL29	AnGL29_01091	1-280
	AnGL29_02156	2-279
	AnGL29_02758	1-263
	AnGL29_02888	311-591
	AnGL29_02983	2-283
	AnGL29_03214	2-285
Syntrophomonas erecta, GB-438	Ga0610585_00100	2-279
	Ga0610585_00434	3-276
	Ga0610585_01557	5-290
	Ga0610585_01777	2-283
	Ga0610585_02469	2-279
	Ga0610585_02476	3-279
Dietzia cinnamea, 55	PaGL#56_01118	2-257
Maridesulfovibrio salexigens, AnGL23	AnGL23_01715	323-598
Exiguobacterium mexicanum, AnGL24	AnGL24_00102	1-286
	AnGL24_02234	3-279
	AnGL24_02316	1-274
	AnGL24_02323	2-281
	AnGL24_02718	1-279
Clostridium subterminale, CB-LS10-1	AnGL53_00581	2-279
	AnGL53_00776	1-282
	AnGL53_02225	15-297
	AnGL53_02499	2-280
	AnGL53_03005	4-282
	AnGL53_03638	3-285
Priestia megaterium, 10L1	PaGL#57_00706	2-277
	PaGL#57_02430	1-281
	PaGL#57_03492	2-279
	PaGL#57_06763	1-282
Geodermatophilus sp., RDM14	PaGL#36_01484	2-279
Fictibacillus phosphorivorans, TY7	PaGL#38_01857	3-279
	PaGL#38_01989	1-280
	PaGL#38_02025	3-282
	PaGL#38_04185	2-282
Syntrophomonas wolfei, saponavida	Swsap_00572	2-275
	Swsap_00583	2-278
	Swsap_02084	3-279
	Swsap_03020	2-282
Bacillus subtilis, 30VD-1	PaGL#66_00755	2-280
	PaGL#66_03058	2-282
Peribacillus frigoritolerans, 30N-5	PaGL#67_00530	1-278
	PaGL#67_02621	3-279
	PaGL#67_02639	3-279
	PaGL#67_04442	2-281
Micromonospora inositola, Utrum1	PaGL#61_05781	2-278
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_01009	2-276
	AnGL54_01032	1-274
	AnGL54_01644	2-281
	AnGL54_02791	1-277
	AnGL54_02974	3-280
	AnGL54_03118	3-278
	AnGL54_03122	4-284
	AnGL54_03709	3-280
Niallia taxi, AG-1	PaGL#37_00874	3-281
	PaGL#37_02414	2-279
	PaGL#37_03492	1-277
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02679	3-279
	Ga0128340_11029:Spalm_01591	4-276
	Spalm_02119	2-279
	Ga0128340_11539:Spalm_02122	2-283
	Ga0128340_11482:Spalm_02081	3-276
	Spalm_00273	0-100
	Ga0128340_101280:Spalm_00274	2-176
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_11467:Swol_00454	13-286
	Swol_01076	2-282
	Swol_01568	3-279
	Ga0065332_112028:Swol_01989	3-280
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_1103:Szehn_00751	1-286
	Ga0124040_14620:Szehn_02461	2-278
	Ga0124040_12045:Szehn_01137	2-280
	Szehn_01918	3-279
	Ga0124040_109177:Szehn_00748	2-283
Syntrophus gentianae, DSM8423	Ga0074853_10853:Sgen_01360	304-582

PF00313:CSD. 'Cold-shock' DNA-binding domain

Found 188 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003513794.1:LOMAGDGF_02625	2-65
Clostridium acetobutylicum, DSM 1731	WP_010964125.1:FHOCHPCF_00854	0-64
	WP_010966272.1:FHOCHPCF_03037	0-64
Acetivibrio alkalicellulosi, DSM 17461	2510059796:NJMEOJLD_00061	2-65
	2510059802:NJMEOJLD_00066	0-63
	2510059805:NJMEOJLD_00069	0-63
	2510060515:NJMEOJLD_00762	2-65
	2510061404:NJMEOJLD_01628	2-65
Pseudobacteroides cellulosolvens, DSM 2933	WP_036942702.1:NEIHKHHH_02654	2-65
	WP_036945440.1:NEIHKHHH_02946	2-64
	WP_242853213.1:NEIHKHHH_05227	0-63
	WP_036940035.1:NEIHKHHH_05754	0-63
Paenibacillus guangzhouensis, KCTC 33171	WP_018755821.1:KDFAKKPF_03187	0-64
	WP_152395529.1:KDFAKKPF_04552	2-65
	WP_018754767.1:KDFAKKPF_05555	0-64
Clostridium acetobutylicum, ATCC 824	WP_010964125.1:OJAMHIDJ_00857	0-64
	WP_010966272.1:OJAMHIDJ_03046	0-64
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697564.1:PROKKA_00618	2-65
	WP_137698072.1:PROKKA_00841	4-68
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02278	2-65
FD_25_22, AnGL7	AnGL7_00698	3-65
	AnGL7_01482	118-179
	AnGL7_01828	5-69
	AnGL7_01902	4-68
	AnGL7_02693	2-66
	AnGL7_02860	4-67
FD_25_27, AnGL8	AnGL8_02073	4-67
	AnGL8_02275	2-65
FD_MS_7_1, AnGL28	AnGL28_02871	2-66
	AnGL28_02990	6-68
FD_SO4_37_1, AnGL2	AnGL2_02000	2-66
	AnGL2_02119	6-68
FD_YE_25_21, AnGL21	AnGL21_04158	4-68
	AnGL21_01889	2-66
	AnGL21_03219	5-68
	AnGL21_03403	5-69
FD_YE_37_3, AnGL26	AnGL26_01061	88-147
	AnGL26_01523	0-63
FD_YE_37_8_2, AnGL3	AnGL3_00065	2-61
	AnGL3_01449	251-306
	AnGL3_02629	2-61
	AnGL3_03554	87-147
FD_YE_37_9_2, AnGL4	AnGL4_01669	0-64
	AnGL4_02289	1-64
Syntrophus buswellii, Sbus	Sbus_00411	2-65
	Sbus_01010	2-65
	Sbus_01245	2-65
	Sbus_02401	119-174
	Sbus_02686	2-64
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01242	2-65
Terrisporobacter hibernicus, AnGL54	AnGL54_00235	2-65
	AnGL54_01510	4-68
	AnGL54_01752	2-64
	AnGL54_01771	2-64
	AnGL54_01932	2-64
	AnGL54_01950	2-65
FD-25-21, AnGL21	AnGL21_00516	4-68
	AnGL21_00615	4-68
	AnGL21_00701	5-69
	AnGL21_01074	118-179
	AnGL21_03088	0-63
	AnGL21_03363	4-67
	AnGL21_03526	2-66
Sunxiuqinia elliptica, AnGL22	AnGL22_01063	88-147
	AnGL22_01525	0-63
Paraclostridium benzoelyticum, AnGL27	AnGL27_00204	2-64
	AnGL27_00084	1-64
	AnGL27_01995	1-64
	AnGL27_02211	2-65
	AnGL27_02650	2-64
	AnGL27_02730	4-68
FD-MS-7-8, AnGL9	AnGL9_02879	6-69
	AnGL9_03060	2-66
FD-YE-37-9-3, AnGL29	AnGL29_02394	0-64
	AnGL29_03014	1-64
Methylobacterium radiotolerans, GTSA1	PaGL#34_06292	3-65
	PaGL#34_00248	68-131
		192-256
	PaGL#34_06580	2-67
	PaGL#34_02991	36-99
		128-192
	PaGL#34_05532	2-66
	PaGL#34_05824	2-66
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01901	2-61
	PaGL#35_03761	2-64
	PaGL#35_05497	3-63
	PaGL#35_05803	0-60
Syntrophomonas erecta, GB-438	Ga0610585_02278	2-65
Variovorax sp., EBFNA2	PaGL#33_03665	9-66
Variovorax paradoxus, 2u118	PaGL#32_02234	9-66
Dietzia cinnamea, 55	PaGL#56_00285	2-66
	PaGL#56_00511	2-66
	PaGL#56_00820	19-80
Maridesulfovibrio salexigens, AnGL23	AnGL23_02071	3-65
Exiguobacterium mexicanum, AnGL24	AnGL24_00255	2-65
	AnGL24_02193	0-64
Clostridium subterminale, CB-LS10-1	AnGL53_00161	3-65
	AnGL53_00612	0-63
	AnGL53_03023	4-68
Priestia megaterium, 10L1	PaGL#57_03709	2-65
	PaGL#57_04011	4-67
	PaGL#57_04089	2-65
	PaGL#57_04282	2-65
	PaGL#57_04734	2-65
	PaGL#57_04737	2-65
	PaGL#57_05774	2-65
	PaGL#57_05778	2-65
	PaGL#57_05982	2-65
	PaGL#57_06025	3-66
	PaGL#57_06448	1-65
Variovorax paradoxus, SPNA7	PaGL#43_02493	9-66
Geodermatophilus sp., RDM14	PaGL#36_00689	2-64
	PaGL#36_00720	2-64
	PaGL#36_02511	2-66
	PaGL#36_02858	2-66
Methylorubrum populi, CTY4	PaGL#39_00205	90-154
	PaGL#39_00693	2-67
	PaGL#39_02679	76-138
		202-266
	PaGL#39_02716	17-79
		109-172
	PaGL#39_03818	2-67
	PaGL#39_04054	2-66
Fictibacillus phosphorivorans, TY7	PaGL#38_01913	2-65
	PaGL#38_04014	2-65
	PaGL#38_04076	2-65
	PaGL#38_04152	2-65
	PaGL#38_04158	1-64
Syntrophomonas wolfei, saponavida	Swsap_00842	1-63
Bacillus subtilis, 30VD-1	PaGL#66_02105	2-65
	PaGL#66_03253	2-65
	PaGL#66_03690	2-65
Peribacillus frigoritolerans, 30N-5	PaGL#67_00060	2-65
	PaGL#67_02467	2-65
	PaGL#67_02958	2-65
	PaGL#67_04229	2-66
	PaGL#67_04288	2-65
	PaGL#67_04607	1-65
Micromonospora inositola, Utrum1	PaGL#61_00696	2-63
	PaGL#61_02375	2-66
	PaGL#61_03499	2-65
	PaGL#61_04711	2-65
	PaGL#61_04783	3-66
	PaGL#61_04917	3-66
	PaGL#61_05206	2-66
	PaGL#61_06198	3-65
	PaGL#61_06664	2-65
Sphingomonas sp., CR2A3	PaGL#62_01350	31-95
		128-189
	PaGL#62_02935	94-156
		198-261
	PaGL#62_03271	3-66
	PaGL#62_03273	3-63
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_04203	2-65
	AnGL54_02317	4-68
	AnGL54_02556	2-64
	AnGL54_02575	2-64
	AnGL54_02736	2-64
	AnGL54_02753	2-65
Niallia taxi, AG-1	PaGL#37_01796	2-65
	PaGL#37_02354	2-65
	PaGL#37_02356	2-65
	PaGL#37_02453	2-65
	PaGL#37_02612	2-65
MPOB, Sfum	639701323:Sfum_00583	2-65
	639701495:Sfum_00762	2-65
	639702217:Sfum_01497	2-65
	639702966:Sfum_02263	2-65
	639703986:Sfum_03297	2-65
	639704820:Sfum_04143	119-174
Syntrophus aciditrophicus, SB	637858339:SYN_00037	120-174
	637858543:SYN_00224	2-65
	SYN_00954	2-44
	637859781:SYN_01372	2-65
	637860749:SYN_02281	2-65
	637861195:SYN_02672	2-65
	637861456:SYN_02910	2-64
Syntrophus gentianae, DSM8423	Ga0074853_1535:Sgen_03346	2-65
	Ga0074853_1135:Sgen_01858	2-64
	Ga0074853_1148:Sgen_01931	2-64
	Ga0074853_11213:Sgen_01777	2-65
	Ga0074853_12921:Sgen_02819	2-65
	Ga0074853_11574:Sgen_02081	2-65
	Sgen_00893	2-64
	Ga0074853_106104:Sgen_01098	121-174
Mucilaginibacter gossypii, cycad 4	PaGL#42_00476	14-74
	PaGL#42_01804	2-64
	PaGL#42_06008	0-60

Search by locus tag: Search

↑ Top