Cellulosome Database Gene Detail

Sfum_04143 Locus tags: • Sequence Length: 184

MPOB, Sfum Syntrophobacter.fumaroxidans.MPOB

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    [PF02482]_[PF00313]

    [5:PF02482]_[119:PF00313]

    [3:IPR003489]_[4:IPR036567]_[5:IPR003489]_[105:IPR012340]_[110:IPR002059]_[112:IPR011129]_[114:IPR002059]_[119:IPR002059]

Looking for similar signatures in the working genomes

PF02482:Ribosomal_S30AE. Sigma 54 modulation protein / S30EA ribosomal protein

Found 78 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003514552.1:LOMAGDGF_00429	3-92
Clostridium acetobutylicum, DSM 1731	WP_010966132.1:FHOCHPCF_02893	3-92
Acetivibrio alkalicellulosi, DSM 17461	2510061191:NJMEOJLD_01419	3-92
Pseudobacteroides cellulosolvens, DSM 2933	WP_036944367.1:NEIHKHHH_04590	3-92
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_11262:GJLLLGJL_00252	3-92
Paenibacillus guangzhouensis, KCTC 33171	WP_152396381.1:KDFAKKPF_05556	3-94
Clostridium acetobutylicum, ATCC 824	WP_010966132.1:OJAMHIDJ_02902	3-92
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697614.1:PROKKA_00677	3-92
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02022	2-92
FD_25_22, AnGL7	AnGL7_01482	4-106
	AnGL7_02008	2-92
	AnGL7_03403	2-91
FD_25_27, AnGL8	AnGL8_02026	2-92
FD_MS_7_1, AnGL28	AnGL28_01443	2-93
	AnGL28_03124	22-123
	AnGL28_03283	23-121
FD_SO4_25_1_F22, AnGL30	AnGL30_00854	2-96
FD_SO4_37_1, AnGL2	AnGL2_00572	2-93
	AnGL2_02254	22-123
	AnGL2_02413	23-121
FD_YE_25_21, AnGL21	AnGL21_00324	2-93
	AnGL21_00544	2-92
FD_YE_37_3, AnGL26	AnGL26_02950	2-98
FD_YE_37_8_2, AnGL3	AnGL3_01153	2-97
FD_YE_37_9_2, AnGL4	AnGL4_02435	3-92
Syntrophus buswellii, Sbus	Sbus_01357	3-94
	Sbus_02401	4-99
Syntrophomonas curvata, Scurva	Scurva_00300	3-92
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01550	3-92
Syntrophomonas wolfei methylbutyratica, Swm	Swm_00227	3-92
Terrisporobacter hibernicus, AnGL54	AnGL54_04424	2-93
	AnGL54_03018	2-93
FD-25-21, AnGL21	AnGL21_00504	2-92
	AnGL21_01074	4-106
	AnGL21_02865	2-91
Sunxiuqinia elliptica, AnGL22	AnGL22_02947	2-98
Paraclostridium benzoelyticum, AnGL27	AnGL27_00442	2-93
	AnGL27_01692	2-93
FD-MS-7-8, AnGL9	AnGL9_01999	2-93
	AnGL9_02892	22-123
FD-YE-37-9-3, AnGL29	AnGL29_03160	3-92
Methylobacterium radiotolerans, GTSA1	PaGL#34_03238	4-100
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01777	2-96
Syntrophomonas erecta, GB-438	Ga0610585_02022	2-92
Variovorax sp., EBFNA2	PaGL#33_00452	3-97
	PaGL#33_04262	6-98
Variovorax paradoxus, 2u118	PaGL#32_00441	3-97
	PaGL#32_03734	6-98
Dietzia cinnamea, 55	PaGL#56_00959	28-125
Maridesulfovibrio salexigens, AnGL23	AnGL23_00953	3-95
Exiguobacterium mexicanum, AnGL24	AnGL24_02192	3-95
Clostridium subterminale, CB-LS10-1	AnGL53_00291	2-92
Priestia megaterium, 10L1	PaGL#57_02449	3-94
Variovorax paradoxus, SPNA7	PaGL#43_00414	3-97
	PaGL#43_03778	6-98
Geodermatophilus sp., RDM14	PaGL#36_03588	2-101
Methylorubrum populi, CTY4	PaGL#39_02204	4-100
Fictibacillus phosphorivorans, TY7	PaGL#38_04156	3-94
Syntrophomonas wolfei, saponavida	Swsap_01360	3-92
Bacillus subtilis, 30VD-1	PaGL#66_00773	3-95
Peribacillus frigoritolerans, 30N-5	PaGL#67_00547	3-94
Micromonospora inositola, Utrum1	PaGL#61_01239	2-99
	PaGL#61_05907	24-106
Sphingomonas sp., CR2A3	PaGL#62_02658	2-97
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_01253	2-93
	AnGL54_03821	2-93
Niallia taxi, AG-1	PaGL#37_03465	3-95
MPOB, Sfum	639702835:Sfum_02129	2-93
	639704820:Sfum_04143	5-102
Syntrophomonas palmitatica, JCM14374 Spalm	Ga0128340_10590:Spalm_00967	3-92
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_11262:Swol_00252	3-92
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_14247:Szehn_02392	3-92
Syntrophus aciditrophicus, SB	637858339:SYN_00037	4-99
	637859541:SYN_01141	2-93
Syntrophus gentianae, DSM8423	Ga0074853_10890:Sgen_01397	3-94
	Ga0074853_106104:Sgen_01098	4-99
Mucilaginibacter gossypii, cycad 4	PaGL#42_00060	2-96
Ruminococcus callidus, ATCC 27760	Rcal_01135	2-93

PF00313:CSD. 'Cold-shock' DNA-binding domain

Found 188 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003513794.1:LOMAGDGF_02625	2-65
Clostridium acetobutylicum, DSM 1731	WP_010964125.1:FHOCHPCF_00854	0-64
	WP_010966272.1:FHOCHPCF_03037	0-64
Acetivibrio alkalicellulosi, DSM 17461	2510059796:NJMEOJLD_00061	2-65
	2510059802:NJMEOJLD_00066	0-63
	2510059805:NJMEOJLD_00069	0-63
	2510060515:NJMEOJLD_00762	2-65
	2510061404:NJMEOJLD_01628	2-65
Pseudobacteroides cellulosolvens, DSM 2933	WP_036942702.1:NEIHKHHH_02654	2-65
	WP_036945440.1:NEIHKHHH_02946	2-64
	WP_242853213.1:NEIHKHHH_05227	0-63
	WP_036940035.1:NEIHKHHH_05754	0-63
Paenibacillus guangzhouensis, KCTC 33171	WP_018755821.1:KDFAKKPF_03187	0-64
	WP_152395529.1:KDFAKKPF_04552	2-65
	WP_018754767.1:KDFAKKPF_05555	0-64
Clostridium acetobutylicum, ATCC 824	WP_010964125.1:OJAMHIDJ_00857	0-64
	WP_010966272.1:OJAMHIDJ_03046	0-64
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697564.1:PROKKA_00618	2-65
	WP_137698072.1:PROKKA_00841	4-68
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02278	2-65
FD_25_22, AnGL7	AnGL7_00698	3-65
	AnGL7_01482	118-179
	AnGL7_01828	5-69
	AnGL7_01902	4-68
	AnGL7_02693	2-66
	AnGL7_02860	4-67
FD_25_27, AnGL8	AnGL8_02073	4-67
	AnGL8_02275	2-65
FD_MS_7_1, AnGL28	AnGL28_02871	2-66
	AnGL28_02990	6-68
FD_SO4_37_1, AnGL2	AnGL2_02000	2-66
	AnGL2_02119	6-68
FD_YE_25_21, AnGL21	AnGL21_04158	4-68
	AnGL21_01889	2-66
	AnGL21_03219	5-68
	AnGL21_03403	5-69
FD_YE_37_3, AnGL26	AnGL26_01061	88-147
	AnGL26_01523	0-63
FD_YE_37_8_2, AnGL3	AnGL3_00065	2-61
	AnGL3_01449	251-306
	AnGL3_02629	2-61
	AnGL3_03554	87-147
FD_YE_37_9_2, AnGL4	AnGL4_01669	0-64
	AnGL4_02289	1-64
Syntrophus buswellii, Sbus	Sbus_00411	2-65
	Sbus_01010	2-65
	Sbus_01245	2-65
	Sbus_02401	119-174
	Sbus_02686	2-64
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01242	2-65
Terrisporobacter hibernicus, AnGL54	AnGL54_00235	2-65
	AnGL54_01510	4-68
	AnGL54_01752	2-64
	AnGL54_01771	2-64
	AnGL54_01932	2-64
	AnGL54_01950	2-65
FD-25-21, AnGL21	AnGL21_00516	4-68
	AnGL21_00615	4-68
	AnGL21_00701	5-69
	AnGL21_01074	118-179
	AnGL21_03088	0-63
	AnGL21_03363	4-67
	AnGL21_03526	2-66
Sunxiuqinia elliptica, AnGL22	AnGL22_01063	88-147
	AnGL22_01525	0-63
Paraclostridium benzoelyticum, AnGL27	AnGL27_00204	2-64
	AnGL27_00084	1-64
	AnGL27_01995	1-64
	AnGL27_02211	2-65
	AnGL27_02650	2-64
	AnGL27_02730	4-68
FD-MS-7-8, AnGL9	AnGL9_02879	6-69
	AnGL9_03060	2-66
FD-YE-37-9-3, AnGL29	AnGL29_02394	0-64
	AnGL29_03014	1-64
Methylobacterium radiotolerans, GTSA1	PaGL#34_06292	3-65
	PaGL#34_00248	68-131
		192-256
	PaGL#34_06580	2-67
	PaGL#34_02991	36-99
		128-192
	PaGL#34_05532	2-66
	PaGL#34_05824	2-66
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01901	2-61
	PaGL#35_03761	2-64
	PaGL#35_05497	3-63
	PaGL#35_05803	0-60
Syntrophomonas erecta, GB-438	Ga0610585_02278	2-65
Variovorax sp., EBFNA2	PaGL#33_03665	9-66
Variovorax paradoxus, 2u118	PaGL#32_02234	9-66
Dietzia cinnamea, 55	PaGL#56_00285	2-66
	PaGL#56_00511	2-66
	PaGL#56_00820	19-80
Maridesulfovibrio salexigens, AnGL23	AnGL23_02071	3-65
Exiguobacterium mexicanum, AnGL24	AnGL24_00255	2-65
	AnGL24_02193	0-64
Clostridium subterminale, CB-LS10-1	AnGL53_00161	3-65
	AnGL53_00612	0-63
	AnGL53_03023	4-68
Priestia megaterium, 10L1	PaGL#57_03709	2-65
	PaGL#57_04011	4-67
	PaGL#57_04089	2-65
	PaGL#57_04282	2-65
	PaGL#57_04734	2-65
	PaGL#57_04737	2-65
	PaGL#57_05774	2-65
	PaGL#57_05778	2-65
	PaGL#57_05982	2-65
	PaGL#57_06025	3-66
	PaGL#57_06448	1-65
Variovorax paradoxus, SPNA7	PaGL#43_02493	9-66
Geodermatophilus sp., RDM14	PaGL#36_00689	2-64
	PaGL#36_00720	2-64
	PaGL#36_02511	2-66
	PaGL#36_02858	2-66
Methylorubrum populi, CTY4	PaGL#39_00205	90-154
	PaGL#39_00693	2-67
	PaGL#39_02679	76-138
		202-266
	PaGL#39_02716	17-79
		109-172
	PaGL#39_03818	2-67
	PaGL#39_04054	2-66
Fictibacillus phosphorivorans, TY7	PaGL#38_01913	2-65
	PaGL#38_04014	2-65
	PaGL#38_04076	2-65
	PaGL#38_04152	2-65
	PaGL#38_04158	1-64
Syntrophomonas wolfei, saponavida	Swsap_00842	1-63
Bacillus subtilis, 30VD-1	PaGL#66_02105	2-65
	PaGL#66_03253	2-65
	PaGL#66_03690	2-65
Peribacillus frigoritolerans, 30N-5	PaGL#67_00060	2-65
	PaGL#67_02467	2-65
	PaGL#67_02958	2-65
	PaGL#67_04229	2-66
	PaGL#67_04288	2-65
	PaGL#67_04607	1-65
Micromonospora inositola, Utrum1	PaGL#61_00696	2-63
	PaGL#61_02375	2-66
	PaGL#61_03499	2-65
	PaGL#61_04711	2-65
	PaGL#61_04783	3-66
	PaGL#61_04917	3-66
	PaGL#61_05206	2-66
	PaGL#61_06198	3-65
	PaGL#61_06664	2-65
Sphingomonas sp., CR2A3	PaGL#62_01350	31-95
		128-189
	PaGL#62_02935	94-156
		198-261
	PaGL#62_03271	3-66
	PaGL#62_03273	3-63
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_04203	2-65
	AnGL54_02317	4-68
	AnGL54_02556	2-64
	AnGL54_02575	2-64
	AnGL54_02736	2-64
	AnGL54_02753	2-65
Niallia taxi, AG-1	PaGL#37_01796	2-65
	PaGL#37_02354	2-65
	PaGL#37_02356	2-65
	PaGL#37_02453	2-65
	PaGL#37_02612	2-65
MPOB, Sfum	639701323:Sfum_00583	2-65
	639701495:Sfum_00762	2-65
	639702217:Sfum_01497	2-65
	639702966:Sfum_02263	2-65
	639703986:Sfum_03297	2-65
	639704820:Sfum_04143	119-174
Syntrophus aciditrophicus, SB	637858339:SYN_00037	120-174
	637858543:SYN_00224	2-65
	SYN_00954	2-44
	637859781:SYN_01372	2-65
	637860749:SYN_02281	2-65
	637861195:SYN_02672	2-65
	637861456:SYN_02910	2-64
Syntrophus gentianae, DSM8423	Ga0074853_1535:Sgen_03346	2-65
	Ga0074853_1135:Sgen_01858	2-64
	Ga0074853_1148:Sgen_01931	2-64
	Ga0074853_11213:Sgen_01777	2-65
	Ga0074853_12921:Sgen_02819	2-65
	Ga0074853_11574:Sgen_02081	2-65
	Sgen_00893	2-64
	Ga0074853_106104:Sgen_01098	121-174
Mucilaginibacter gossypii, cycad 4	PaGL#42_00476	14-74
	PaGL#42_01804	2-64
	PaGL#42_06008	0-60

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