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FHOCHPCF_02893 Locus tags: • Sequence Length: 182

Clostridium acetobutylicum, DSM 1731 GCF_000218855.1

5050100100150150200200
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FHOCHPCF_02888 FHOCHPCF_02889 galT prfB secA FHOCHPCF_02894 FHOCHPCF_02895 
    [PF02482]_[PF16321]

    [3:PF02482]_[112:PF16321]

    [1:IPR003489]_[1:IPR036567]_[3:IPR003489]_[112:IPR032528]

Looking for similar signatures in the working genomes

PF02482:Ribosomal_S30AE. Sigma 54 modulation protein / S30EA ribosomal protein

Found 78 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514552.1:LOMAGDGF_004293-92
Clostridium acetobutylicum, DSM 1731 WP_010966132.1:FHOCHPCF_028933-92
Acetivibrio alkalicellulosi, DSM 17461 2510061191:NJMEOJLD_014193-92
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944367.1:NEIHKHHH_045903-92
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11262:GJLLLGJL_002523-92
Paenibacillus guangzhouensis, KCTC 33171 WP_152396381.1:KDFAKKPF_055563-94
Clostridium acetobutylicum, ATCC 824 WP_010966132.1:OJAMHIDJ_029023-92
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697614.1:PROKKA_006773-92
Syntrophomonas erecta, DSM 16215 OINOEOOJ_020222-92
FD_25_22, AnGL7 AnGL7_014824-106
AnGL7_020082-92
AnGL7_034032-91
FD_25_27, AnGL8 AnGL8_020262-92
FD_MS_7_1, AnGL28 AnGL28_014432-93
AnGL28_0312422-123
AnGL28_0328323-121
FD_SO4_25_1_F22, AnGL30 AnGL30_008542-96
FD_SO4_37_1, AnGL2 AnGL2_005722-93
AnGL2_0225422-123
AnGL2_0241323-121
FD_YE_25_21, AnGL21 AnGL21_003242-93
AnGL21_005442-92
FD_YE_37_3, AnGL26 AnGL26_029502-98
FD_YE_37_8_2, AnGL3 AnGL3_011532-97
FD_YE_37_9_2, AnGL4 AnGL4_024353-92
Syntrophus buswellii, Sbus Sbus_013573-94
Sbus_024014-99
Syntrophomonas curvata, Scurva Scurva_003003-92
Syntrophomonas erecta sporosyntropha, Sespor Sespor_015503-92
Syntrophomonas wolfei methylbutyratica, Swm Swm_002273-92
Terrisporobacter hibernicus, AnGL54 AnGL54_044242-93
AnGL54_030182-93
FD-25-21, AnGL21 AnGL21_005042-92
AnGL21_010744-106
AnGL21_028652-91
Sunxiuqinia elliptica, AnGL22 AnGL22_029472-98
Paraclostridium benzoelyticum, AnGL27 AnGL27_004422-93
AnGL27_016922-93
FD-MS-7-8, AnGL9 AnGL9_019992-93
AnGL9_0289222-123
FD-YE-37-9-3, AnGL29 AnGL29_031603-92
Methylobacterium radiotolerans, GTSA1 PaGL#34_032384-100
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_017772-96
Syntrophomonas erecta, GB-438 Ga0610585_020222-92
Variovorax sp., EBFNA2 PaGL#33_004523-97
PaGL#33_042626-98
Variovorax paradoxus, 2u118 PaGL#32_004413-97
PaGL#32_037346-98
Dietzia cinnamea, 55 PaGL#56_0095928-125
Maridesulfovibrio salexigens, AnGL23 AnGL23_009533-95
Exiguobacterium mexicanum, AnGL24 AnGL24_021923-95
Clostridium subterminale, CB-LS10-1 AnGL53_002912-92
Priestia megaterium, 10L1 PaGL#57_024493-94
Variovorax paradoxus, SPNA7 PaGL#43_004143-97
PaGL#43_037786-98
Geodermatophilus sp., RDM14 PaGL#36_035882-101
Methylorubrum populi, CTY4 PaGL#39_022044-100
Fictibacillus phosphorivorans, TY7 PaGL#38_041563-94
Syntrophomonas wolfei, saponavida Swsap_013603-92
Bacillus subtilis, 30VD-1 PaGL#66_007733-95
Peribacillus frigoritolerans, 30N-5 PaGL#67_005473-94
Micromonospora inositola, Utrum1 PaGL#61_012392-99
PaGL#61_0590724-106
Sphingomonas sp., CR2A3 PaGL#62_026582-97
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_012532-93
AnGL54_038212-93
Niallia taxi, AG-1 PaGL#37_034653-95
MPOB, Sfum 639702835:Sfum_021292-93
639704820:Sfum_041435-102
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10590:Spalm_009673-92
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11262:Swol_002523-92
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14247:Szehn_023923-92
Syntrophus aciditrophicus, SB 637858339:SYN_000374-99
637859541:SYN_011412-93
Syntrophus gentianae, DSM8423 Ga0074853_10890:Sgen_013973-94
Ga0074853_106104:Sgen_010984-99
Mucilaginibacter gossypii, cycad 4 PaGL#42_000602-96
Ruminococcus callidus, ATCC 27760 Rcal_011352-93

PF16321:Ribosom_S30AE_C. Sigma 54 modulation/S30EA ribosomal protein C terminus

Found 44 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514552.1:LOMAGDGF_00429116-172
Clostridium acetobutylicum, DSM 1731 WP_010966132.1:FHOCHPCF_02893112-169
Acetivibrio alkalicellulosi, DSM 17461 2510061191:NJMEOJLD_01419118-173
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944367.1:NEIHKHHH_04590115-171
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11262:GJLLLGJL_00252120-175
Paenibacillus guangzhouensis, KCTC 33171 WP_152396381.1:KDFAKKPF_05556123-178
Clostridium acetobutylicum, ATCC 824 WP_010966132.1:OJAMHIDJ_02902112-169
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697614.1:PROKKA_00677116-173
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02022120-175
FD_YE_37_9_2, AnGL4 AnGL4_02435116-172
Syntrophus buswellii, Sbus Sbus_01357119-172
Syntrophomonas curvata, Scurva Scurva_00300120-175
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01550120-175
Syntrophomonas wolfei methylbutyratica, Swm Swm_00227120-175
Terrisporobacter hibernicus, AnGL54 AnGL54_04424117-173
AnGL54_03018121-174
Paraclostridium benzoelyticum, AnGL27 AnGL27_00442126-178
AnGL27_01692120-175
FD-YE-37-9-3, AnGL29 AnGL29_03160116-172
Methylobacterium radiotolerans, GTSA1 PaGL#34_03238134-188
Syntrophomonas erecta, GB-438 Ga0610585_02022120-175
Dietzia cinnamea, 55 PaGL#56_00959172-226
Maridesulfovibrio salexigens, AnGL23 AnGL23_00953118-173
Exiguobacterium mexicanum, AnGL24 AnGL24_02192126-182
Clostridium subterminale, CB-LS10-1 AnGL53_00291114-171
Priestia megaterium, 10L1 PaGL#57_02449123-179
Geodermatophilus sp., RDM14 PaGL#36_03588145-199
Methylorubrum populi, CTY4 PaGL#39_02204137-191
Fictibacillus phosphorivorans, TY7 PaGL#38_04156123-179
Syntrophomonas wolfei, saponavida Swsap_01360116-172
Bacillus subtilis, 30VD-1 PaGL#66_00773128-184
Peribacillus frigoritolerans, 30N-5 PaGL#67_00547126-181
Micromonospora inositola, Utrum1 PaGL#61_01239156-209
Sphingomonas sp., CR2A3 PaGL#62_02658136-190
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01253117-173
AnGL54_03821121-174
Niallia taxi, AG-1 PaGL#37_03465122-179
MPOB, Sfum 639702835:Sfum_02129119-175
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10590:Spalm_00967120-175
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11262:Swol_00252120-175
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14247:Szehn_02392121-176
Syntrophus aciditrophicus, SB 637859541:SYN_01141121-172
Syntrophus gentianae, DSM8423 Ga0074853_10890:Sgen_01397119-172
Ruminococcus callidus, ATCC 27760 Rcal_01135112-167
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