Cellulosome Database Gene Detail

AnGL54_03275 Locus tags: • Sequence Length: 1228

Terrisporobacter hibernicus, CB-LS-10-2 Batch4_genome_fasta/bc2038

Show complete sequence

Click domain (colored bar) to show sequence

    [PF03372]_[PF04563]_[PF04561]_[PF04561]_[PF04565]_[PF10385]_[PF00562]_[PF04560]

    [7:PF03372]_[25:PF04563]_[138:PF04561]_[359:PF04561]_[489:PF04565]_[567:PF10385]_[696:PF00562]_[1084:PF04560]

    [6:IPR036691]_[7:IPR005135]_[25:IPR007644]_[26:IPR015712]_[138:IPR007642]_[359:IPR007642]_[489:IPR007645]_[567:IPR019462]_[696:IPR007120]_[1084:IPR007641]

Looking for similar signatures in the working genomes

PF03372:Exo_endo_phos. Endonuclease/Exonuclease/phosphatase family

Found 186 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003517935.1:LOMAGDGF_01819	5-243
Clostridium acetobutylicum, DSM 1731	WP_010963545.1:FHOCHPCF_00247	4-242
Acetivibrio alkalicellulosi, DSM 17461	2510060778:NJMEOJLD_01019	128-319
	2510061885:NJMEOJLD_02094	4-243
Pseudobacteroides cellulosolvens, DSM 2933	WP_036935808.1:NEIHKHHH_04614	4-243
Ruminococcus albus_7, DSM 20455	WP_013498536.1:HCIAFFOI_01935	4-241
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_111278:GJLLLGJL_01251	4-225
Paenibacillus guangzhouensis, KCTC 33171	WP_193726877.1:KDFAKKPF_02253	15-231
	WP_152395298.1:KDFAKKPF_04235	233-485
	WP_152395708.1:KDFAKKPF_04772	4-243
	WP_152396198.1:KDFAKKPF_05344	12-277
Clostridium acetobutylicum, ATCC 824	WP_010963545.1:OJAMHIDJ_00247	4-242
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697296.1:PROKKA_00276	4-243
Syntrophomonas erecta, DSM 16215	OINOEOOJ_01419	11-184
FD_25_22, AnGL7	AnGL7_00395	76-282
	AnGL7_01102	4-260
	AnGL7_02376	8-241
	AnGL7_02772	27-310
FD_25_27, AnGL8	AnGL8_01853	69-273
	AnGL8_00923	4-260
FD_MS_7_1, AnGL28	AnGL28_02035	4-247
	AnGL28_02307	33-237
	AnGL28_02997	3-248
	AnGL28_03500	105-307
FD_SO4_25_1_F22, AnGL30	AnGL30_00017	109-356
	AnGL30_01276	51-370
	AnGL30_01319	120-365
	AnGL30_01420	54-297
	AnGL30_01753	5-227
	AnGL30_01873	75-411
FD_SO4_37_1, AnGL2	AnGL2_01164	4-247
	AnGL2_01436	33-237
	AnGL2_02126	3-248
	AnGL2_02630	105-307
FD_YE_25_21, AnGL21	AnGL21_01901	4-260
	AnGL21_03186	33-268
FD_YE_37_3, AnGL26	AnGL26_00101	54-278
	AnGL26_00103	41-266
	AnGL26_00492	29-272
	AnGL26_00494	36-277
	AnGL26_00622	37-279
	AnGL26_00999	27-329
	AnGL26_02044	4-246
	AnGL26_02316	99-342
	AnGL26_02606	70-273
	AnGL26_02873	26-335
	AnGL26_03951	262-516
	AnGL26_03955	21-327
FD_YE_37_8_2, AnGL3	AnGL3_00505	114-311
	AnGL3_00987	30-345
	AnGL3_01270	29-334
	AnGL3_01544	40-309
	AnGL3_01734	125-340
	AnGL3_03040	271-522
FD_YE_37_9_2, AnGL4	AnGL4_02720	8-246
Syntrophus buswellii, Sbus	Sbus_00645	14-261
	Sbus_01691	134-367
	Sbus_01823	53-309
Syntrophomonas curvata, Scurva	Scurva_02663	14-231
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_02220	11-184
Syntrophomonas wolfei methylbutyratica, Swm	Swm_01418	4-225
Terrisporobacter hibernicus, AnGL54	AnGL54_03847	25-179
	AnGL54_01969	4-242
	AnGL54_02471	7-194
FD-25-21, AnGL21	AnGL21_00284	8-241
	AnGL21_01453	4-260
	AnGL21_02234	74-280
	AnGL21_03448	27-309
Sunxiuqinia elliptica, AnGL22	AnGL22_00101	54-278
	AnGL22_00103	41-266
	AnGL22_00493	29-272
	AnGL22_00495	36-277
	AnGL22_00623	37-279
	AnGL22_01000	27-329
	AnGL22_02041	4-246
	AnGL22_02313	99-342
	AnGL22_02603	70-273
	AnGL22_02870	26-335
	AnGL22_03947	262-516
	AnGL22_03951	21-327
Paraclostridium benzoelyticum, AnGL27	AnGL27_01269	35-241
	AnGL27_02926	4-202
	AnGL27_02976	4-242
FD-MS-7-8, AnGL9	AnGL9_00752	107-305
	AnGL9_01791	31-231
	AnGL9_02268	4-247
	AnGL9_02811	3-248
FD-YE-37-9-3, AnGL29	AnGL29_03445	8-246
Methylobacterium radiotolerans, GTSA1	PaGL#34_00900	32-216
	PaGL#34_03175	4-254
	PaGL#34_04074	6-260
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_00142	110-360
	PaGL#35_00235	4-246
	PaGL#35_03340	3-247
	PaGL#35_05269	42-272
Syntrophomonas erecta, GB-438	Ga0610585_01419	11-184
Variovorax sp., EBFNA2	PaGL#33_00014	43-256
	PaGL#33_00325	5-256
	PaGL#33_00551	376-649
	PaGL#33_01335	14-244
	PaGL#33_01919	3-250
	PaGL#33_04353	15-335
Variovorax paradoxus, 2u118	PaGL#32_00012	20-233
	PaGL#32_00318	5-256
	PaGL#32_01629	3-250
	PaGL#32_02016	3-248
	PaGL#32_03785	48-325
	PaGL#32_04205	10-240
Dietzia cinnamea, 55	PaGL#56_00900	9-276
	PaGL#56_01190	111-294
	PaGL#56_02003	8-254
	PaGL#56_02725	3-258
Maridesulfovibrio salexigens, AnGL23	AnGL23_00107	62-335
	AnGL23_02978	4-245
Exiguobacterium mexicanum, AnGL24	AnGL24_00143	884-1024
	AnGL24_00289	19-175
	AnGL24_00518	3-242
Clostridium subterminale, CB-LS10-1	AnGL53_00742	4-242
	AnGL53_02968	59-343
Priestia megaterium, 10L1	PaGL#57_02328	22-231
	PaGL#57_04755	4-241
Variovorax paradoxus, SPNA7	PaGL#43_00012	20-233
	PaGL#43_00295	5-256
	PaGL#43_01623	3-250
	PaGL#43_02126	3-248
	PaGL#43_03829	48-325
	PaGL#43_03955	383-654
	PaGL#43_04361	10-240
Methanospirillum lacunae, Ki8-1	MLKi8_01949	6-254
Geodermatophilus sp., RDM14	PaGL#36_00026	3-254
	PaGL#36_00407	10-209
	PaGL#36_00716	3-245
	PaGL#36_02043	52-326
	PaGL#36_02154	461-718
	PaGL#36_03289	23-257
Methylorubrum populi, CTY4	PaGL#39_01696	4-254
	PaGL#39_03905	6-260
	PaGL#39_04223	35-267
Fictibacillus phosphorivorans, TY7	PaGL#38_00044	3-149
	PaGL#38_01863	636-782
	PaGL#38_04393	46-293
	PaGL#38_04718	19-256
Methanospirillum hungatei, GP1	MhGP1_02081	7-254
Methanospirillum stamsii, Pt1	MLKi8_02635	7-254
Syntrophomonas wolfei, saponavida	Swsap_02688	4-245
Bacillus subtilis, 30VD-1	PaGL#66_00212	4-243
Peribacillus frigoritolerans, 30N-5	PaGL#67_01022	817-963
	PaGL#67_03021	3-242
Micromonospora inositola, Utrum1	PaGL#61_01590	101-311
	PaGL#61_01611	483-697
	PaGL#61_02006	4-255
	PaGL#61_02059	146-350
	PaGL#61_02302	3-249
	PaGL#61_02751	117-310
	PaGL#61_03218	7-277
	PaGL#61_03902	5-253
	PaGL#61_04088	80-351
	PaGL#61_05391	10-220
Sphingomonas sp., CR2A3	PaGL#62_00955	4-221
	PaGL#62_01291	4-249
	PaGL#62_02091	3-248
	PaGL#62_02688	3-251
	PaGL#62_02928	42-267
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00677	25-179
	AnGL54_02772	4-242
	AnGL54_03275	7-194
Niallia taxi, AG-1	PaGL#37_01956	3-242
Methanospirillum.hungatei GP1, MhGP1	8064047467:MhGP1_00822	7-254
Methanospirillum.hungatei.JF-1, MhunJF1	Ga0065338_111310:Mhun_01311	7-254
MPOB, Sfum	639700994:Sfum_00252	17-232
	639701369:Sfum_00627	42-281
	639703096:Sfum_02390	5-250
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_111278:Swol_01251	4-225
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_109103:Szehn_00674	7-224
Syntrophus aciditrophicus, SB	637859006:SYN_00654	6-253
	637859801:SYN_01392	100-334
	637860742:SYN_02275	51-307
Syntrophus gentianae, DSM8423	Ga0074853_10985:Sgen_01513	6-253
	Sgen_01848	100-333
	Ga0074853_10779:Sgen_01239	51-307
Mucilaginibacter gossypii, cycad 4	PaGL#42_00345	26-283
	PaGL#42_00641	24-190
	PaGL#42_01989	57-281
	PaGL#42_02553	3-248
	PaGL#42_04807	4-246
	PaGL#42_05109	107-359

PF04563:RNA_pol_Rpb2_1. RNA polymerase beta subunit

Found 64 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	25-476
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	25-475
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	25-476
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	26-474
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	28-497
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	26-368
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	32-458
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	25-475
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	26-474
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	25-368
FD_25_22, AnGL7	AnGL7_00269	25-502
FD_25_27, AnGL8	AnGL8_02978	25-501
FD_MS_7_1, AnGL28	AnGL28_02876	18-435
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	24-461
FD_SO4_37_1, AnGL2	AnGL2_02005	18-435
FD_YE_25_21, AnGL21	AnGL21_02979	25-500
FD_YE_37_3, AnGL26	AnGL26_02962	24-460
FD_YE_37_8_2, AnGL3	AnGL3_01142	23-459
FD_YE_37_9_2, AnGL4	AnGL4_02355	30-479
Syntrophus buswellii, Sbus	Sbus_00466	18-501
Syntrophomonas curvata, Scurva	Scurva_02815	25-368
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	25-368
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	26-368
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	25-476
FD-25-21, AnGL21	AnGL21_02374	25-502
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	24-460
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	25-475
FD-MS-7-8, AnGL9	AnGL9_03064	18-435
FD-YE-37-9-3, AnGL29	AnGL29_03080	30-479
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	26-505
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	23-460
Syntrophomonas erecta, GB-438	Ga0610585_02378	25-368
Variovorax sp., EBFNA2	PaGL#33_00622	29-512
Variovorax paradoxus, 2u118	PaGL#32_00629	29-512
Dietzia cinnamea, 55	PaGL#56_02396	33-406
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	19-499
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	30-458
Clostridium subterminale, CB-LS10-1	AnGL53_03358	39-489
Priestia megaterium, 10L1	PaGL#57_02135	27-454
	PaGL#57_01399	18-415
Variovorax paradoxus, SPNA7	PaGL#43_00604	29-512
Methanospirillum lacunae, Ki8-1	MLKi8_01631	17-407
Geodermatophilus sp., RDM14	PaGL#36_03798	158-462
Methylorubrum populi, CTY4	PaGL#39_03893	26-505
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	27-455
Methanospirillum hungatei, GP1	MhGP1_01661	17-407
Methanospirillum stamsii, Pt1	MLKi8_02043	17-407
Syntrophomonas wolfei, saponavida	Swsap_00972	25-368
Bacillus subtilis, 30VD-1	PaGL#66_00061	27-454
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	27-454
Micromonospora inositola, Utrum1	PaGL#61_06424	82-391
Sphingomonas sp., CR2A3	PaGL#62_01400	39-516
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	25-476
Niallia taxi, AG-1	PaGL#37_00131	27-453
Methanospirillum.hungatei GP1, MhGP1	8064047893:MhGP1_01242	17-407
Methanospirillum.hungatei.JF-1, MhunJF1	Mhun_00883	17-407
MPOB, Sfum	639702316:Sfum_01598	25-508
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02731	41-383
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	26-368
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	25-368
Syntrophus aciditrophicus, SB	637858601:SYN_00276	18-501
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	18-501
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	23-460
Ruminococcus callidus, ATCC 27760	Rcal_02788	45-497

PF04561:RNA_pol_Rpb2_2. RNA polymerase Rpb2, domain 2

Found 106 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	138-280
		381-431
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	139-293
		366-430
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	138-281
		394-431
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	138-280
		356-429
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	140-286
		416-449
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	138-322
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	144-296
		375-414
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	139-293
		366-430
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	138-283
		352-429
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	138-322
FD_25_22, AnGL7	AnGL7_00269	151-225
		350-456
FD_25_27, AnGL8	AnGL8_02978	150-223
		358-455
FD_MS_7_1, AnGL28	AnGL28_02876	282-388
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	148-218
		294-415
FD_SO4_37_1, AnGL2	AnGL2_02005	282-388
FD_YE_25_21, AnGL21	AnGL21_02979	150-223
		337-454
FD_YE_37_3, AnGL26	AnGL26_02962	148-218
		297-415
FD_YE_37_8_2, AnGL3	AnGL3_01142	147-217
		304-414
FD_YE_37_9_2, AnGL4	AnGL4_02355	142-287
		380-433
Syntrophus buswellii, Sbus	Sbus_00466	149-221
		359-456
Syntrophomonas curvata, Scurva	Scurva_02815	138-322
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	138-322
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	138-322
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	138-284
		359-431
FD-25-21, AnGL21	AnGL21_02374	151-225
		350-456
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	148-218
		297-415
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	138-287
		356-430
FD-MS-7-8, AnGL9	AnGL9_03064	282-388
FD-YE-37-9-3, AnGL29	AnGL29_03080	142-287
		380-433
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	157-229
		362-462
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	147-220
		309-415
Syntrophomonas erecta, GB-438	Ga0610585_02378	138-322
Variovorax sp., EBFNA2	PaGL#33_00622	161-234
		373-466
Variovorax paradoxus, 2u118	PaGL#32_00629	161-234
		373-466
Dietzia cinnamea, 55	PaGL#56_02396	161-360
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	149-255
		354-454
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	142-288
		376-414
Clostridium subterminale, CB-LS10-1	AnGL53_03358	153-303
Priestia megaterium, 10L1	PaGL#57_02135	139-289
		370-410
	PaGL#57_01399	130-275
		327-364
Variovorax paradoxus, SPNA7	PaGL#43_00604	161-234
		373-466
Methanospirillum lacunae, Ki8-1	MLKi8_01631	168-360
Geodermatophilus sp., RDM14	PaGL#36_03798	231-418
Methylorubrum populi, CTY4	PaGL#39_03893	157-229
		365-462
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	139-289
		374-411
Methanospirillum hungatei, GP1	MhGP1_01661	168-360
Methanospirillum stamsii, Pt1	MLKi8_02043	168-360
Syntrophomonas wolfei, saponavida	Swsap_00972	138-322
Bacillus subtilis, 30VD-1	PaGL#66_00061	139-290
		370-410
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	139-286
		373-410
Micromonospora inositola, Utrum1	PaGL#61_06424	160-347
Sphingomonas sp., CR2A3	PaGL#62_01400	167-239
		373-473
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	138-284
		359-431
Niallia taxi, AG-1	PaGL#37_00131	139-288
		368-409
Methanospirillum.hungatei GP1, MhGP1	8064047893:MhGP1_01242	168-360
Methanospirillum.hungatei.JF-1, MhunJF1	Mhun_00883	168-360
MPOB, Sfum	639702316:Sfum_01598	157-228
		355-463
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02731	153-337
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	138-322
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	138-322
Syntrophus aciditrophicus, SB	637858601:SYN_00276	149-221
		360-456
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	150-221
		356-456
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	147-220
		308-415
Ruminococcus callidus, ATCC 27760	Rcal_02788	140-284
		416-449

PF04561:RNA_pol_Rpb2_2. RNA polymerase Rpb2, domain 2

Found 106 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	138-280
		381-431
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	139-293
		366-430
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	138-281
		394-431
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	138-280
		356-429
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	140-286
		416-449
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	138-322
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	144-296
		375-414
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	139-293
		366-430
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	138-283
		352-429
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	138-322
FD_25_22, AnGL7	AnGL7_00269	151-225
		350-456
FD_25_27, AnGL8	AnGL8_02978	150-223
		358-455
FD_MS_7_1, AnGL28	AnGL28_02876	282-388
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	148-218
		294-415
FD_SO4_37_1, AnGL2	AnGL2_02005	282-388
FD_YE_25_21, AnGL21	AnGL21_02979	150-223
		337-454
FD_YE_37_3, AnGL26	AnGL26_02962	148-218
		297-415
FD_YE_37_8_2, AnGL3	AnGL3_01142	147-217
		304-414
FD_YE_37_9_2, AnGL4	AnGL4_02355	142-287
		380-433
Syntrophus buswellii, Sbus	Sbus_00466	149-221
		359-456
Syntrophomonas curvata, Scurva	Scurva_02815	138-322
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	138-322
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	138-322
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	138-284
		359-431
FD-25-21, AnGL21	AnGL21_02374	151-225
		350-456
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	148-218
		297-415
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	138-287
		356-430
FD-MS-7-8, AnGL9	AnGL9_03064	282-388
FD-YE-37-9-3, AnGL29	AnGL29_03080	142-287
		380-433
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	157-229
		362-462
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	147-220
		309-415
Syntrophomonas erecta, GB-438	Ga0610585_02378	138-322
Variovorax sp., EBFNA2	PaGL#33_00622	161-234
		373-466
Variovorax paradoxus, 2u118	PaGL#32_00629	161-234
		373-466
Dietzia cinnamea, 55	PaGL#56_02396	161-360
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	149-255
		354-454
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	142-288
		376-414
Clostridium subterminale, CB-LS10-1	AnGL53_03358	153-303
Priestia megaterium, 10L1	PaGL#57_02135	139-289
		370-410
	PaGL#57_01399	130-275
		327-364
Variovorax paradoxus, SPNA7	PaGL#43_00604	161-234
		373-466
Methanospirillum lacunae, Ki8-1	MLKi8_01631	168-360
Geodermatophilus sp., RDM14	PaGL#36_03798	231-418
Methylorubrum populi, CTY4	PaGL#39_03893	157-229
		365-462
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	139-289
		374-411
Methanospirillum hungatei, GP1	MhGP1_01661	168-360
Methanospirillum stamsii, Pt1	MLKi8_02043	168-360
Syntrophomonas wolfei, saponavida	Swsap_00972	138-322
Bacillus subtilis, 30VD-1	PaGL#66_00061	139-290
		370-410
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	139-286
		373-410
Micromonospora inositola, Utrum1	PaGL#61_06424	160-347
Sphingomonas sp., CR2A3	PaGL#62_01400	167-239
		373-473
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	138-284
		359-431
Niallia taxi, AG-1	PaGL#37_00131	139-288
		368-409
Methanospirillum.hungatei GP1, MhGP1	8064047893:MhGP1_01242	168-360
Methanospirillum.hungatei.JF-1, MhunJF1	Mhun_00883	168-360
MPOB, Sfum	639702316:Sfum_01598	157-228
		355-463
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02731	153-337
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	138-322
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	138-322
Syntrophus aciditrophicus, SB	637858601:SYN_00276	149-221
		360-456
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	150-221
		356-456
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	147-220
		308-415
Ruminococcus callidus, ATCC 27760	Rcal_02788	140-284
		416-449

PF04565:RNA_pol_Rpb2_3. RNA polymerase Rpb2, domain 3

Found 64 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	489-558
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	488-557
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	489-558
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	487-556
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	509-578
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	380-449
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	472-541
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	488-557
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	487-556
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	380-449
FD_25_22, AnGL7	AnGL7_00269	514-582
FD_25_27, AnGL8	AnGL8_02978	513-581
FD_MS_7_1, AnGL28	AnGL28_02876	448-517
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	473-542
FD_SO4_37_1, AnGL2	AnGL2_02005	448-517
FD_YE_25_21, AnGL21	AnGL21_02979	512-580
FD_YE_37_3, AnGL26	AnGL26_02962	473-542
FD_YE_37_8_2, AnGL3	AnGL3_01142	472-541
FD_YE_37_9_2, AnGL4	AnGL4_02355	491-560
Syntrophus buswellii, Sbus	Sbus_00466	514-583
Syntrophomonas curvata, Scurva	Scurva_02815	380-449
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	380-449
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	380-449
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	489-558
FD-25-21, AnGL21	AnGL21_02374	514-582
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	473-542
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	488-557
FD-MS-7-8, AnGL9	AnGL9_03064	448-517
FD-YE-37-9-3, AnGL29	AnGL29_03080	491-560
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	520-589
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	473-542
Syntrophomonas erecta, GB-438	Ga0610585_02378	380-449
Variovorax sp., EBFNA2	PaGL#33_00622	524-592
Variovorax paradoxus, 2u118	PaGL#32_00629	524-592
Dietzia cinnamea, 55	PaGL#56_02396	418-487
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	512-581
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	472-541
Clostridium subterminale, CB-LS10-1	AnGL53_03358	503-572
Priestia megaterium, 10L1	PaGL#57_02135	468-537
	PaGL#57_01399	428-497
Variovorax paradoxus, SPNA7	PaGL#43_00604	524-592
Methanospirillum lacunae, Ki8-1	MLKi8_01631	427-492
Geodermatophilus sp., RDM14	PaGL#36_03798	476-544
Methylorubrum populi, CTY4	PaGL#39_03893	520-589
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	469-538
Methanospirillum hungatei, GP1	MhGP1_01661	427-492
Methanospirillum stamsii, Pt1	MLKi8_02043	427-492
Syntrophomonas wolfei, saponavida	Swsap_00972	380-449
Bacillus subtilis, 30VD-1	PaGL#66_00061	468-537
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	468-537
Micromonospora inositola, Utrum1	PaGL#61_06424	405-474
Sphingomonas sp., CR2A3	PaGL#62_01400	531-600
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	489-558
Niallia taxi, AG-1	PaGL#37_00131	467-536
Methanospirillum.hungatei GP1, MhGP1	8064047893:MhGP1_01242	427-492
Methanospirillum.hungatei.JF-1, MhunJF1	Mhun_00883	427-492
MPOB, Sfum	639702316:Sfum_01598	521-590
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02731	395-464
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	380-449
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	380-449
Syntrophus aciditrophicus, SB	637858601:SYN_00276	514-583
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	514-583
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	473-542
Ruminococcus callidus, ATCC 27760	Rcal_02788	509-578

PF10385:RNA_pol_Rpb2_45. RNA polymerase beta subunit external 1 domain

Found 59 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	567-636
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	566-634
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	567-635
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	565-633
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	587-655
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	458-526
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	550-621
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	566-634
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	565-633
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	458-526
FD_25_22, AnGL7	AnGL7_00269	592-658
FD_25_27, AnGL8	AnGL8_02978	591-657
FD_MS_7_1, AnGL28	AnGL28_02876	526-592
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	551-620
FD_SO4_37_1, AnGL2	AnGL2_02005	526-592
FD_YE_25_21, AnGL21	AnGL21_02979	590-656
FD_YE_37_3, AnGL26	AnGL26_02962	551-619
FD_YE_37_8_2, AnGL3	AnGL3_01142	550-619
FD_YE_37_9_2, AnGL4	AnGL4_02355	569-639
Syntrophus buswellii, Sbus	Sbus_00466	592-658
Syntrophomonas curvata, Scurva	Scurva_02815	458-526
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	458-526
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	458-526
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	567-636
FD-25-21, AnGL21	AnGL21_02374	592-658
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	551-619
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	566-635
FD-MS-7-8, AnGL9	AnGL9_03064	526-592
FD-YE-37-9-3, AnGL29	AnGL29_03080	569-639
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	598-664
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	551-619
Syntrophomonas erecta, GB-438	Ga0610585_02378	458-526
Variovorax sp., EBFNA2	PaGL#33_00622	602-668
Variovorax paradoxus, 2u118	PaGL#32_00629	602-668
Dietzia cinnamea, 55	PaGL#56_02396	496-563
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	590-656
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	550-618
Clostridium subterminale, CB-LS10-1	AnGL53_03358	581-649
Priestia megaterium, 10L1	PaGL#57_02135	546-614
	PaGL#57_01399	506-575
Variovorax paradoxus, SPNA7	PaGL#43_00604	602-668
Geodermatophilus sp., RDM14	PaGL#36_03798	554-621
Methylorubrum populi, CTY4	PaGL#39_03893	598-664
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	547-615
Syntrophomonas wolfei, saponavida	Swsap_00972	458-526
Bacillus subtilis, 30VD-1	PaGL#66_00061	546-614
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	546-614
Micromonospora inositola, Utrum1	PaGL#61_06424	483-550
Sphingomonas sp., CR2A3	PaGL#62_01400	609-675
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	567-636
Niallia taxi, AG-1	PaGL#37_00131	545-613
MPOB, Sfum	639702316:Sfum_01598	599-665
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02731	473-541
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	458-526
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	458-526
Syntrophus aciditrophicus, SB	637858601:SYN_00276	592-658
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	592-658
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	551-619
Ruminococcus callidus, ATCC 27760	Rcal_02788	587-655

PF00562:RNA_pol_Rpb2_6. RNA polymerase Rpb2, domain 6

Found 65 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	696-1083
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	695-1082
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	695-1082
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	695-1080
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	716-1128
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	586-973
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	681-1076
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	695-1082
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	693-1080
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	587-973
FD_25_22, AnGL7	AnGL7_00269	718-1267
FD_25_27, AnGL8	AnGL8_02978	717-1264
FD_MS_7_1, AnGL28	AnGL28_02876	652-1169
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	681-1194
FD_SO4_37_1, AnGL2	AnGL2_02005	652-1169
FD_YE_25_21, AnGL21	AnGL21_02979	716-1263
FD_YE_37_3, AnGL26	AnGL26_02962	681-1194
FD_YE_37_8_2, AnGL3	AnGL3_01142	679-1193
FD_YE_37_9_2, AnGL4	AnGL4_02355	699-1126
Syntrophus buswellii, Sbus	Sbus_00466	718-1284
Syntrophomonas curvata, Scurva	Scurva_02815	587-973
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	587-973
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	586-973
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	696-1083
FD-25-21, AnGL21	AnGL21_02374	718-1267
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	681-1194
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	695-1082
FD-MS-7-8, AnGL9	AnGL9_03064	652-1168
FD-YE-37-9-3, AnGL29	AnGL29_03080	699-1126
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	725-1280
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	680-1191
Syntrophomonas erecta, GB-438	Ga0610585_02378	587-973
Variovorax sp., EBFNA2	PaGL#33_00622	729-1296
Variovorax paradoxus, 2u118	PaGL#32_00629	729-1296
Dietzia cinnamea, 55	PaGL#56_02396	626-1045
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	716-1279
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	678-1073
Clostridium subterminale, CB-LS10-1	AnGL53_03358	710-1097
Priestia megaterium, 10L1	PaGL#57_02135	675-1069
	PaGL#57_01399	635-1021
Variovorax paradoxus, SPNA7	PaGL#43_00604	729-1296
Methanospirillum lacunae, Ki8-1	MLKi8_01632	137-509
Geodermatophilus sp., RDM14	PaGL#36_03798	681-1098
Methylorubrum populi, CTY4	PaGL#39_03893	725-1280
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	676-1070
Methanospirillum hungatei, GP1	MhGP1_01662	137-509
Methanospirillum stamsii, Pt1	MLKi8_02044	137-509
Syntrophomonas wolfei, saponavida	Swsap_00972	587-973
Bacillus subtilis, 30VD-1	PaGL#66_00061	675-1069
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	675-1069
Micromonospora inositola, Utrum1	PaGL#61_06424	610-1029
Sphingomonas sp., CR2A3	PaGL#62_01400	736-1301
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	696-1083
Niallia taxi, AG-1	PaGL#37_00131	674-1068
Methanospirillum.hungatei GP1, MhGP1	8064047892:MhGP1_01241	137-509
Methanospirillum.hungatei.JF-1, MhunJF1	Ga0065338_11885:Mhun_00884	137-509
MPOB, Sfum	639702316:Sfum_01598	725-1288
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02730	2-61
	Spalm_02731	602-849
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	586-973
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	586-973
Syntrophus aciditrophicus, SB	637858601:SYN_00276	718-1284
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	718-1284
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	680-1191
Ruminococcus callidus, ATCC 27760	Rcal_02788	716-1128

PF04560:RNA_pol_Rpb2_7. RNA polymerase Rpb2, domain 7

Found 64 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003515365.1:LOMAGDGF_00327	1084-1160
Clostridium acetobutylicum, DSM 1731	WP_010966421.1:FHOCHPCF_03186	1083-1158
Acetivibrio alkalicellulosi, DSM 17461	2510059747:NJMEOJLD_00011	1083-1159
Pseudobacteroides cellulosolvens, DSM 2933	WP_036937177.1:NEIHKHHH_04462	1081-1157
Ruminococcus albus_7, DSM 20455	WP_013499494.1:HCIAFFOI_03007	1129-1204
Syntrophomonas wolfei subsp. wolfei, Goettingen	Ga0065332_112501:GJLLLGJL_02456	974-1049
Paenibacillus guangzhouensis, KCTC 33171	KDFAKKPF_04420	1077-1152
Clostridium acetobutylicum, ATCC 824	WP_010966421.1:OJAMHIDJ_03195	1083-1158
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697349.1:PROKKA_03411	1081-1157
Syntrophomonas erecta, DSM 16215	OINOEOOJ_02378	974-1049
FD_25_22, AnGL7	AnGL7_00269	1268-1343
FD_25_27, AnGL8	AnGL8_02978	1265-1340
FD_MS_7_1, AnGL28	AnGL28_02876	1170-1245
FD_SO4_25_1_F22, AnGL30	AnGL30_00842	1195-1269
FD_SO4_37_1, AnGL2	AnGL2_02005	1170-1245
FD_YE_25_21, AnGL21	AnGL21_02979	1264-1339
FD_YE_37_3, AnGL26	AnGL26_02962	1195-1269
FD_YE_37_8_2, AnGL3	AnGL3_01142	1194-1268
FD_YE_37_9_2, AnGL4	AnGL4_02355	1127-1202
Syntrophus buswellii, Sbus	Sbus_00466	1285-1360
Syntrophomonas curvata, Scurva	Scurva_02815	974-1049
Syntrophomonas erecta sporosyntropha, Sespor	Sespor_01139	974-1049
Syntrophomonas wolfei methylbutyratica, Swm	Swm_02839	974-1049
Terrisporobacter hibernicus, AnGL54	AnGL54_03275	1084-1159
FD-25-21, AnGL21	AnGL21_02374	1268-1343
Sunxiuqinia elliptica, AnGL22	AnGL22_02959	1195-1269
Paraclostridium benzoelyticum, AnGL27	AnGL27_00742	1083-1159
FD-MS-7-8, AnGL9	AnGL9_03064	1169-1244
FD-YE-37-9-3, AnGL29	AnGL29_03080	1127-1202
Methylobacterium radiotolerans, GTSA1	PaGL#34_04168	1281-1356
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_01790	1192-1266
Syntrophomonas erecta, GB-438	Ga0610585_02378	974-1049
Variovorax sp., EBFNA2	PaGL#33_00622	1297-1372
Variovorax paradoxus, 2u118	PaGL#32_00629	1297-1372
Dietzia cinnamea, 55	PaGL#56_02396	1046-1121
Maridesulfovibrio salexigens, AnGL23	AnGL23_02048	1280-1355
Exiguobacterium mexicanum, AnGL24	AnGL24_02981	1074-1149
Clostridium subterminale, CB-LS10-1	AnGL53_03358	1098-1173
Priestia megaterium, 10L1	PaGL#57_02135	1070-1145
	PaGL#57_01399	1023-1098
Variovorax paradoxus, SPNA7	PaGL#43_00604	1297-1372
Methanospirillum lacunae, Ki8-1	MLKi8_01632	510-602
Geodermatophilus sp., RDM14	PaGL#36_03798	1099-1174
Methylorubrum populi, CTY4	PaGL#39_03893	1281-1356
Fictibacillus phosphorivorans, TY7	PaGL#38_00514	1071-1145
Methanospirillum hungatei, GP1	MhGP1_01662	510-602
Methanospirillum stamsii, Pt1	MLKi8_02044	510-602
Syntrophomonas wolfei, saponavida	Swsap_00972	974-1049
Bacillus subtilis, 30VD-1	PaGL#66_00061	1070-1145
Peribacillus frigoritolerans, 30N-5	PaGL#67_00144	1070-1145
Micromonospora inositola, Utrum1	PaGL#61_06424	1030-1105
Sphingomonas sp., CR2A3	PaGL#62_01400	1302-1377
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_00111	1084-1159
Niallia taxi, AG-1	PaGL#37_00131	1069-1144
Methanospirillum.hungatei GP1, MhGP1	8064047892:MhGP1_01241	510-602
Methanospirillum.hungatei.JF-1, MhunJF1	Ga0065338_11885:Mhun_00884	510-602
MPOB, Sfum	639702316:Sfum_01598	1289-1364
Syntrophomonas palmitatica, JCM14374 Spalm	Spalm_02730	62-137
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B	Ga0065332_112501:Swol_02456	974-1049
Syntrophomonas zehnderi, OL-4 Szehn	Ga0124040_118138:Szehn_01085	974-1049
Syntrophus aciditrophicus, SB	637858601:SYN_00276	1285-1360
Syntrophus gentianae, DSM8423	Ga0074853_10281:Sgen_00292	1285-1361
Mucilaginibacter gossypii, cycad 4	PaGL#42_00073	1192-1266
Ruminococcus callidus, ATCC 27760	Rcal_02788	1129-1204

Search by locus tag: Search

↑ Top