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Mhun_00884 Locus tags: • Sequence Length: 636

Methanospirillum.hungatei.JF-1, MhunJF1 Methanospirillum.hungatei.JF-1

5050100100150150200200250250300300350350400400450450500500550550600600650650
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Mhun_00878 unknown Mhun_00883 Mhun_00884 Mhun_00885 Mhun_00886 Mhun_00889 
    [PF04566]_[PF04567]_[PF00562]_[PF04560]

    [7:PF04566]_[89:PF04567]_[137:PF00562]_[510:PF04560]

    [7:IPR007646]_[89:IPR007647]_[117:IPR015712]_[137:IPR007120]_[510:IPR007641]

Looking for similar signatures in the working genomes

PF04566:RNA_pol_Rpb2_4. RNA polymerase Rpb2, domain 4

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_016327-68
Methanospirillum hungatei, GP1 MhGP1_016627-69
Methanospirillum stamsii, Pt1 MLKi8_020447-68
Methanospirillum.hungatei GP1, MhGP1 8064047892:MhGP1_012417-69
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11885:Mhun_008847-69

PF04567:RNA_pol_Rpb2_5. RNA polymerase Rpb2, domain 5

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_0163289-125
Methanospirillum hungatei, GP1 MhGP1_0166289-122
Methanospirillum stamsii, Pt1 MLKi8_0204489-122
Methanospirillum.hungatei GP1, MhGP1 8064047892:MhGP1_0124189-122
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11885:Mhun_0088489-122

PF00562:RNA_pol_Rpb2_6. RNA polymerase Rpb2, domain 6

Found 65 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515365.1:LOMAGDGF_00327696-1083
Clostridium acetobutylicum, DSM 1731 WP_010966421.1:FHOCHPCF_03186695-1082
Acetivibrio alkalicellulosi, DSM 17461 2510059747:NJMEOJLD_00011695-1082
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937177.1:NEIHKHHH_04462695-1080
Ruminococcus albus_7, DSM 20455 WP_013499494.1:HCIAFFOI_03007716-1128
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112501:GJLLLGJL_02456586-973
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_04420681-1076
Clostridium acetobutylicum, ATCC 824 WP_010966421.1:OJAMHIDJ_03195695-1082
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697349.1:PROKKA_03411693-1080
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02378587-973
FD_25_22, AnGL7 AnGL7_00269718-1267
FD_25_27, AnGL8 AnGL8_02978717-1264
FD_MS_7_1, AnGL28 AnGL28_02876652-1169
FD_SO4_25_1_F22, AnGL30 AnGL30_00842681-1194
FD_SO4_37_1, AnGL2 AnGL2_02005652-1169
FD_YE_25_21, AnGL21 AnGL21_02979716-1263
FD_YE_37_3, AnGL26 AnGL26_02962681-1194
FD_YE_37_8_2, AnGL3 AnGL3_01142679-1193
FD_YE_37_9_2, AnGL4 AnGL4_02355699-1126
Syntrophus buswellii, Sbus Sbus_00466718-1284
Syntrophomonas curvata, Scurva Scurva_02815587-973
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01139587-973
Syntrophomonas wolfei methylbutyratica, Swm Swm_02839586-973
Terrisporobacter hibernicus, AnGL54 AnGL54_03275696-1083
FD-25-21, AnGL21 AnGL21_02374718-1267
Sunxiuqinia elliptica, AnGL22 AnGL22_02959681-1194
Paraclostridium benzoelyticum, AnGL27 AnGL27_00742695-1082
FD-MS-7-8, AnGL9 AnGL9_03064652-1168
FD-YE-37-9-3, AnGL29 AnGL29_03080699-1126
Methylobacterium radiotolerans, GTSA1 PaGL#34_04168725-1280
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01790680-1191
Syntrophomonas erecta, GB-438 Ga0610585_02378587-973
Variovorax sp., EBFNA2 PaGL#33_00622729-1296
Variovorax paradoxus, 2u118 PaGL#32_00629729-1296
Dietzia cinnamea, 55 PaGL#56_02396626-1045
Maridesulfovibrio salexigens, AnGL23 AnGL23_02048716-1279
Exiguobacterium mexicanum, AnGL24 AnGL24_02981678-1073
Clostridium subterminale, CB-LS10-1 AnGL53_03358710-1097
Priestia megaterium, 10L1 PaGL#57_02135675-1069
PaGL#57_01399635-1021
Variovorax paradoxus, SPNA7 PaGL#43_00604729-1296
Methanospirillum lacunae, Ki8-1 MLKi8_01632137-509
Geodermatophilus sp., RDM14 PaGL#36_03798681-1098
Methylorubrum populi, CTY4 PaGL#39_03893725-1280
Fictibacillus phosphorivorans, TY7 PaGL#38_00514676-1070
Methanospirillum hungatei, GP1 MhGP1_01662137-509
Methanospirillum stamsii, Pt1 MLKi8_02044137-509
Syntrophomonas wolfei, saponavida Swsap_00972587-973
Bacillus subtilis, 30VD-1 PaGL#66_00061675-1069
Peribacillus frigoritolerans, 30N-5 PaGL#67_00144675-1069
Micromonospora inositola, Utrum1 PaGL#61_06424610-1029
Sphingomonas sp., CR2A3 PaGL#62_01400736-1301
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00111696-1083
Niallia taxi, AG-1 PaGL#37_00131674-1068
Methanospirillum.hungatei GP1, MhGP1 8064047892:MhGP1_01241137-509
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11885:Mhun_00884137-509
MPOB, Sfum 639702316:Sfum_01598725-1288
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_027302-61
Spalm_02731602-849
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112501:Swol_02456586-973
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118138:Szehn_01085586-973
Syntrophus aciditrophicus, SB 637858601:SYN_00276718-1284
Syntrophus gentianae, DSM8423 Ga0074853_10281:Sgen_00292718-1284
Mucilaginibacter gossypii, cycad 4 PaGL#42_00073680-1191
Ruminococcus callidus, ATCC 27760 Rcal_02788716-1128

PF04560:RNA_pol_Rpb2_7. RNA polymerase Rpb2, domain 7

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515365.1:LOMAGDGF_003271084-1160
Clostridium acetobutylicum, DSM 1731 WP_010966421.1:FHOCHPCF_031861083-1158
Acetivibrio alkalicellulosi, DSM 17461 2510059747:NJMEOJLD_000111083-1159
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937177.1:NEIHKHHH_044621081-1157
Ruminococcus albus_7, DSM 20455 WP_013499494.1:HCIAFFOI_030071129-1204
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112501:GJLLLGJL_02456974-1049
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_044201077-1152
Clostridium acetobutylicum, ATCC 824 WP_010966421.1:OJAMHIDJ_031951083-1158
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697349.1:PROKKA_034111081-1157
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02378974-1049
FD_25_22, AnGL7 AnGL7_002691268-1343
FD_25_27, AnGL8 AnGL8_029781265-1340
FD_MS_7_1, AnGL28 AnGL28_028761170-1245
FD_SO4_25_1_F22, AnGL30 AnGL30_008421195-1269
FD_SO4_37_1, AnGL2 AnGL2_020051170-1245
FD_YE_25_21, AnGL21 AnGL21_029791264-1339
FD_YE_37_3, AnGL26 AnGL26_029621195-1269
FD_YE_37_8_2, AnGL3 AnGL3_011421194-1268
FD_YE_37_9_2, AnGL4 AnGL4_023551127-1202
Syntrophus buswellii, Sbus Sbus_004661285-1360
Syntrophomonas curvata, Scurva Scurva_02815974-1049
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01139974-1049
Syntrophomonas wolfei methylbutyratica, Swm Swm_02839974-1049
Terrisporobacter hibernicus, AnGL54 AnGL54_032751084-1159
FD-25-21, AnGL21 AnGL21_023741268-1343
Sunxiuqinia elliptica, AnGL22 AnGL22_029591195-1269
Paraclostridium benzoelyticum, AnGL27 AnGL27_007421083-1159
FD-MS-7-8, AnGL9 AnGL9_030641169-1244
FD-YE-37-9-3, AnGL29 AnGL29_030801127-1202
Methylobacterium radiotolerans, GTSA1 PaGL#34_041681281-1356
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_017901192-1266
Syntrophomonas erecta, GB-438 Ga0610585_02378974-1049
Variovorax sp., EBFNA2 PaGL#33_006221297-1372
Variovorax paradoxus, 2u118 PaGL#32_006291297-1372
Dietzia cinnamea, 55 PaGL#56_023961046-1121
Maridesulfovibrio salexigens, AnGL23 AnGL23_020481280-1355
Exiguobacterium mexicanum, AnGL24 AnGL24_029811074-1149
Clostridium subterminale, CB-LS10-1 AnGL53_033581098-1173
Priestia megaterium, 10L1 PaGL#57_021351070-1145
PaGL#57_013991023-1098
Variovorax paradoxus, SPNA7 PaGL#43_006041297-1372
Methanospirillum lacunae, Ki8-1 MLKi8_01632510-602
Geodermatophilus sp., RDM14 PaGL#36_037981099-1174
Methylorubrum populi, CTY4 PaGL#39_038931281-1356
Fictibacillus phosphorivorans, TY7 PaGL#38_005141071-1145
Methanospirillum hungatei, GP1 MhGP1_01662510-602
Methanospirillum stamsii, Pt1 MLKi8_02044510-602
Syntrophomonas wolfei, saponavida Swsap_00972974-1049
Bacillus subtilis, 30VD-1 PaGL#66_000611070-1145
Peribacillus frigoritolerans, 30N-5 PaGL#67_001441070-1145
Micromonospora inositola, Utrum1 PaGL#61_064241030-1105
Sphingomonas sp., CR2A3 PaGL#62_014001302-1377
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001111084-1159
Niallia taxi, AG-1 PaGL#37_001311069-1144
Methanospirillum.hungatei GP1, MhGP1 8064047892:MhGP1_01241510-602
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11885:Mhun_00884510-602
MPOB, Sfum 639702316:Sfum_015981289-1364
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0273062-137
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112501:Swol_02456974-1049
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118138:Szehn_01085974-1049
Syntrophus aciditrophicus, SB 637858601:SYN_002761285-1360
Syntrophus gentianae, DSM8423 Ga0074853_10281:Sgen_002921285-1361
Mucilaginibacter gossypii, cycad 4 PaGL#42_000731192-1266
Ruminococcus callidus, ATCC 27760 Rcal_027881129-1204
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