SMPP Home

PaGL#37_03527 Locus tags: • Sequence Length: 286

Niallia taxi, AG-1 Batch4_genome_fasta/bc2040

5050100100150150200200250250300300
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#37_03522 PaGL#37_03524 PaGL#37_03525 PaGL#37_03530 PaGL#37_03531 
    [PF01418]_[PF01380]

    [14:PF01418]_[130:PF01380]

    [3:IPR000281]_[14:IPR000281]_[14:IPR009057]_[100:IPR046348]_[121:IPR035472]_[126:IPR001347]_[130:IPR001347]

Looking for similar signatures in the working genomes

PF01418:HTH_6. Helix-turn-helix domain, rpiR family

Found 101 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516200.1:LOMAGDGF_015658-77
Clostridium acetobutylicum, DSM 1731 WP_010963515.1:FHOCHPCF_002174-74
WP_010963852.1:FHOCHPCF_005770-74
WP_010965155.1:FHOCHPCF_018928-79
WP_010966694.1:FHOCHPCF_034786-60
Acetivibrio alkalicellulosi, DSM 17461 2510061579:NJMEOJLD_017987-77
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942195.1:NEIHKHHH_014856-76
Ruminococcus albus_7, DSM 20455 WP_013498434.1:HCIAFFOI_018327-75
Paenibacillus guangzhouensis, KCTC 33171 WP_152391970.1:KDFAKKPF_0039618-90
WP_152394793.1:KDFAKKPF_0365612-81
WP_152396533.1:KDFAKKPF_057254-78
WP_152397516.1:KDFAKKPF_062915-78
WP_152397528.1:KDFAKKPF_063043-78
Clostridium acetobutylicum, ATCC 824 WP_010963515.1:OJAMHIDJ_002174-74
WP_010963852.1:OJAMHIDJ_005780-74
WP_010965155.1:OJAMHIDJ_019008-79
WP_010966694.1:OJAMHIDJ_034906-60
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696028.1:PROKKA_020198-80
FD_25_22, AnGL7 AnGL7_013840-76
AnGL7_0365618-89
FD_25_27, AnGL8 AnGL8_001170-74
FD_YE_25_21, AnGL21 AnGL21_012110-76
AnGL21_0198110-76
AnGL21_026208-73
FD_YE_37_9_2, AnGL4 AnGL4_000496-77
AnGL4_009193-76
AnGL4_011305-77
AnGL4_015926-76
Terrisporobacter hibernicus, AnGL54 AnGL54_040509-70
AnGL54_0148511-84
AnGL54_018462-76
AnGL54_018470-73
FD-25-21, AnGL21 AnGL21_000027-64
AnGL21_011690-76
Paraclostridium benzoelyticum, AnGL27 AnGL27_010533-68
AnGL27_017800-69
AnGL27_023000-75
AnGL27_0237811-84
AnGL27_030030-74
FD-YE-37-9-3, AnGL29 AnGL29_007746-77
AnGL29_016443-76
AnGL29_018555-77
AnGL29_023176-76
Methylobacterium radiotolerans, GTSA1 PaGL#34_035649-77
Variovorax sp., EBFNA2 PaGL#33_061686-72
PaGL#33_063036-73
PaGL#33_012064-77
PaGL#33_0329211-80
PaGL#33_042230-72
PaGL#33_0510813-78
Variovorax paradoxus, 2u118 PaGL#32_011814-77
PaGL#32_0238611-80
PaGL#32_037100-73
Exiguobacterium mexicanum, AnGL24 AnGL24_024482-73
AnGL24_025083-77
AnGL24_027113-76
AnGL24_028295-71
Clostridium subterminale, CB-LS10-1 AnGL53_016167-80
Priestia megaterium, 10L1 PaGL#57_063636-72
PaGL#57_064215-76
PaGL#57_065453-78
PaGL#57_066783-76
Variovorax paradoxus, SPNA7 PaGL#43_065027-72
PaGL#43_011784-77
PaGL#43_0263311-80
PaGL#43_037510-73
Fictibacillus phosphorivorans, TY7 PaGL#38_0424513-83
PaGL#38_043384-72
PaGL#38_044342-69
PaGL#38_045907-77
Bacillus subtilis, 30VD-1 PaGL#66_033610-76
PaGL#66_040193-78
Peribacillus frigoritolerans, 30N-5 PaGL#67_0133013-80
PaGL#67_025234-78
PaGL#67_025694-79
PaGL#67_033433-77
PaGL#67_0361710-77
PaGL#67_046891-68
Micromonospora inositola, Utrum1 PaGL#61_0146519-81
PaGL#61_0261511-83
PaGL#61_0506032-103
PaGL#61_0595318-88
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_008799-70
AnGL54_0229211-84
AnGL54_026502-76
AnGL54_026510-73
Niallia taxi, AG-1 PaGL#37_055512-75
PaGL#37_002302-37
PaGL#37_043871-73
PaGL#37_044008-74
PaGL#37_0460510-73
PaGL#37_009633-76
PaGL#37_049326-79
PaGL#37_049415-71
PaGL#37_049594-79
PaGL#37_050122-71
PaGL#37_0149818-73
PaGL#37_0213814-76
PaGL#37_0352714-70
PaGL#37_038235-72
PaGL#37_038293-76

PF01380:SIS. SIS domain

Found 402 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519132.1:LOMAGDGF_01138287-414
460-588
WP_003516200.1:LOMAGDGF_01565132-260
Clostridium acetobutylicum, DSM 1731 WP_013913644.1:FHOCHPCF_00183288-413
464-589
WP_010963499.1:FHOCHPCF_0020042-167
WP_010963515.1:FHOCHPCF_00217127-256
WP_010963719.1:FHOCHPCF_0044029-127
WP_010963852.1:FHOCHPCF_00577109-241
WP_010965155.1:FHOCHPCF_01892131-257
WP_010966335.1:FHOCHPCF_0310024-146
WP_010966694.1:FHOCHPCF_03478128-195
Acetivibrio alkalicellulosi, DSM 17461 2510061579:NJMEOJLD_01798131-258
2510062120:NJMEOJLD_02322291-413
461-589
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942195.1:NEIHKHHH_01485130-258
WP_036938418.1:NEIHKHHH_03595287-414
460-589
Ruminococcus albus_7, DSM 20455 WP_013496898.1:HCIAFFOI_00147297-420
464-590
WP_013498434.1:HCIAFFOI_01832128-255
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112243:GJLLLGJL_0219849-175
219-348
Paenibacillus guangzhouensis, KCTC 33171 WP_152391823.1:KDFAKKPF_0023211-144
WP_152391970.1:KDFAKKPF_00396136-261
WP_152391973.1:KDFAKKPF_003998-144
WP_193726528.1:KDFAKKPF_035534-140
WP_152394793.1:KDFAKKPF_03656132-260
WP_152395387.1:KDFAKKPF_04348288-412
462-591
WP_152395470.1:KDFAKKPF_0448418-146
WP_152396304.1:KDFAKKPF_0546730-137
WP_152396533.1:KDFAKKPF_05725126-255
WP_152396535.1:KDFAKKPF_0572733-163
WP_152396802.1:KDFAKKPF_0606044-170
210-299
WP_152397516.1:KDFAKKPF_06291131-259
WP_152397517.1:KDFAKKPF_0629241-167
WP_152397528.1:KDFAKKPF_06304126-254
Clostridium acetobutylicum, ATCC 824 WP_010963484.1:OJAMHIDJ_00183288-413
464-589
WP_010963499.1:OJAMHIDJ_0020042-167
WP_010963515.1:OJAMHIDJ_00217127-256
WP_010963719.1:OJAMHIDJ_0044129-127
WP_010963852.1:OJAMHIDJ_00578109-241
WP_010965155.1:OJAMHIDJ_01900131-257
WP_010966335.1:OJAMHIDJ_0310924-146
WP_010966694.1:OJAMHIDJ_03490128-195
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698486.1:PROKKA_01257291-414
460-590
WP_244648355.1:PROKKA_0143830-154
WP_137696117.1:PROKKA_0192339-158
203-326
WP_137696028.1:PROKKA_02019132-259
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00038286-411
464-587
OINOEOOJ_0049550-176
223-351
OINOEOOJ_0200139-126
FD_25_22, AnGL7 AnGL7_00099289-418
462-592
AnGL7_0065746-174
AnGL7_010309-144
AnGL7_0111814-146
AnGL7_01384124-252
AnGL7_0234836-168
AnGL7_0273443-166
AnGL7_0348337-168
AnGL7_03656131-254
FD_25_27, AnGL8 AnGL8_00117122-250
AnGL8_0122564-195
AnGL8_014409-145
AnGL8_0248822-146
AnGL8_0282544-171
AnGL8_029038-144
AnGL8_03034290-419
463-593
AnGL8_03042130-210
FD_MS_7_1, AnGL28 AnGL28_0072143-171
AnGL28_02383295-421
464-594
AnGL28_029447-142
FD_SO4_25_1_F22, AnGL30 AnGL30_0103548-176
AnGL30_01995296-424
471-598
FD_SO4_37_1, AnGL2 AnGL2_01512295-421
464-594
AnGL2_020737-142
AnGL2_0340043-171
FD_YE_25_21, AnGL21 AnGL21_0033039-170
AnGL21_0074011-146
AnGL21_01211123-252
AnGL21_01981133-255
AnGL21_02567136-217
AnGL21_02620128-258
AnGL21_0268615-144
AnGL21_027792-138
AnGL21_02781289-419
462-592
FD_YE_37_3, AnGL26 AnGL26_0035216-73
101-167
AnGL26_0121241-167
AnGL26_01825292-419
466-594
AnGL26_01942126-207
AnGL26_0292223-146
FD_YE_37_8_2, AnGL3 AnGL3_0104639-170
AnGL3_02923290-419
468-593
FD_YE_37_9_2, AnGL4 AnGL4_00049130-258
AnGL4_00919121-244
AnGL4_00927292-419
468-590
AnGL4_01130125-241
AnGL4_0159135-166
AnGL4_01592130-257
Syntrophus buswellii, Sbus Sbus_0115013-144
Sbus_0177739-171
Sbus_02375623-753
Syntrophomonas curvata, Scurva Scurva_0032838-117
Scurva_02575286-413
458-586
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0050950-176
223-351
Sespor_00963286-411
464-587
Sespor_0157139-126
Syntrophomonas wolfei methylbutyratica, Swm Swm_0024736-113
Swm_0261149-175
219-348
Terrisporobacter hibernicus, AnGL54 AnGL54_03882288-415
460-588
AnGL54_04050110-221
AnGL54_00606551-683
AnGL54_01485137-263
AnGL54_01846114-218
AnGL54_01847110-241
AnGL54_03029288-415
460-588
AnGL54_0366057-190
229-357
FD-25-21, AnGL21 AnGL21_01169124-252
AnGL21_0143714-146
AnGL21_015219-144
AnGL21_0194246-174
AnGL21_02521289-418
462-592
AnGL21_0291522-146
AnGL21_0348643-166
Sunxiuqinia elliptica, AnGL22 AnGL22_0035316-73
101-167
AnGL22_0121441-167
AnGL22_01822292-419
466-594
AnGL22_01939126-207
AnGL22_0291923-146
Paraclostridium benzoelyticum, AnGL27 AnGL27_00454289-415
460-590
AnGL27_01053107-206
AnGL27_0117242-142
AnGL27_01780115-216
AnGL27_0189858-192
227-338
AnGL27_02300115-223
AnGL27_02378136-262
AnGL27_03003124-255
AnGL27_03006129-211
FD-MS-7-8, AnGL9 AnGL9_0017239-170
AnGL9_02181297-421
464-593
AnGL9_031347-142
FD-YE-37-9-3, AnGL29 AnGL29_00774130-258
AnGL29_01644121-244
AnGL29_01652292-419
468-590
AnGL29_01855125-241
AnGL29_0231635-166
AnGL29_02317130-257
Methylobacterium radiotolerans, GTSA1 PaGL#34_0141824-145
PaGL#34_02678288-416
460-589
PaGL#34_03564134-257
PaGL#34_0477061-193
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00366121-204
PaGL#35_01115291-418
464-593
PaGL#35_01445292-419
466-594
PaGL#35_0368737-166
PaGL#35_0492710-141
PaGL#35_050548-141
Syntrophomonas erecta, GB-438 Ga0610585_00038286-411
464-587
Ga0610585_0049550-176
223-351
Ga0610585_0200139-126
Variovorax sp., EBFNA2 PaGL#33_06303126-255
PaGL#33_00927307-429
478-606
PaGL#33_01206126-255
PaGL#33_03292136-247
PaGL#33_04223138-251
PaGL#33_05108137-266
PaGL#33_0551621-145
PaGL#33_0605850-181
Variovorax paradoxus, 2u118 PaGL#32_00940307-429
478-606
PaGL#32_01181126-255
PaGL#32_02386138-247
PaGL#32_03710164-251
PaGL#32_0479021-145
PaGL#32_0527751-180
Dietzia cinnamea, 55 PaGL#56_00846294-420
466-600
PaGL#56_02369438-556
Maridesulfovibrio salexigens, AnGL23 AnGL23_0214417-148
AnGL23_0268168-167
AnGL23_0348541-173
AnGL23_03523293-417
462-550
Exiguobacterium mexicanum, AnGL24 AnGL24_00520285-411
459-580
AnGL24_02448113-231
AnGL24_02508127-256
AnGL24_02708126-207
AnGL24_02711127-255
AnGL24_02829127-242
AnGL24_02917285-411
454-580
Clostridium subterminale, CB-LS10-1 AnGL53_01616131-258
AnGL53_03280288-415
462-588
Priestia megaterium, 10L1 PaGL#57_00299287-414
456-583
PaGL#57_02065288-413
456-583
PaGL#57_0450829-137
PaGL#57_0505623-130
PaGL#57_062684-139
PaGL#57_06363119-232
PaGL#57_06412126-210
PaGL#57_06421129-259
PaGL#57_0653632-155
PaGL#57_06545126-256
PaGL#57_06546126-196
PaGL#57_06678126-255
Variovorax paradoxus, SPNA7 PaGL#43_00931307-429
478-606
PaGL#43_01178126-255
PaGL#43_02633138-247
PaGL#43_03751164-251
PaGL#43_0493621-145
PaGL#43_04949141-265
PaGL#43_049691-75
PaGL#43_0549351-180
Methanospirillum lacunae, Ki8-1 MLKi8_0055126-129
MLKi8_01233273-398
433-557
MLKi8_0247435-132
Geodermatophilus sp., RDM14 PaGL#36_0046733-165
PaGL#36_03742299-426
472-601
Methylorubrum populi, CTY4 PaGL#39_0367363-191
PaGL#39_04031292-415
458-589
PaGL#39_0422151-174
PaGL#39_04222121-203
Fictibacillus phosphorivorans, TY7 PaGL#38_00582288-415
458-584
PaGL#38_0274535-161
PaGL#38_0367245-165
PaGL#38_04245132-260
PaGL#38_04338111-235
PaGL#38_04434130-255
PaGL#38_04590127-256
Methanospirillum hungatei, GP1 MhGP1_0110716-145
MhGP1_0117142-145
MhGP1_01352273-398
433-558
MhGP1_0272626-120
Methanospirillum stamsii, Pt1 MLKi8_0141342-144
MLKi8_014789-145
MLKi8_01633273-399
432-558
MLKi8_0299335-126
Syntrophomonas wolfei, saponavida Swsap_0137839-126
Swsap_01629289-416
462-590
Bacillus subtilis, 30VD-1 PaGL#66_0104824-130
PaGL#66_03361109-218
PaGL#66_0384832-156
PaGL#66_04005287-413
456-583
PaGL#66_04018131-204
PaGL#66_04019126-256
Peribacillus frigoritolerans, 30N-5 PaGL#67_000313-138
PaGL#67_00072287-413
456-583
PaGL#67_0112935-151
PaGL#67_0127931-153
PaGL#67_01330130-236
PaGL#67_0251322-143
PaGL#67_02523129-257
PaGL#67_02561127-208
PaGL#67_02569127-256
PaGL#67_03343126-256
PaGL#67_03344130-209
PaGL#67_03617130-254
PaGL#67_0378837-141
PaGL#67_04689126-252
Micromonospora inositola, Utrum1 PaGL#61_0219022-145
PaGL#61_0235639-150
PaGL#61_02615137-262
PaGL#61_0377623-147
PaGL#61_0377838-172
PaGL#61_050595-145
PaGL#61_05060159-289
PaGL#61_057217-145
PaGL#61_0595246-177
PaGL#61_05953145-271
PaGL#61_0614242-167
211-331
PaGL#61_06343313-438
485-619
Sphingomonas sp., CR2A3 PaGL#62_0038563-187
221-305
PaGL#62_03649286-413
461-589
PaGL#62_0366034-160
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0049057-190
229-357
AnGL54_00711288-415
460-588
AnGL54_00879110-221
AnGL54_02292137-263
AnGL54_02650114-218
AnGL54_02651110-241
AnGL54_03832288-415
460-588
Niallia taxi, AG-1 PaGL#37_00200289-413
456-583
PaGL#37_041654-139
PaGL#37_05551129-238
PaGL#37_0023081-197
PaGL#37_0435835-149
PaGL#37_04387127-247
PaGL#37_04400126-256
PaGL#37_04605122-251
PaGL#37_00963127-255
PaGL#37_0097539-164
PaGL#37_04932126-230
PaGL#37_04941130-252
PaGL#37_04959127-256
PaGL#37_0106242-124
PaGL#37_05012104-203
PaGL#37_0110346-167
PaGL#37_0517016-116
PaGL#37_02138124-255
PaGL#37_0329932-155
PaGL#37_03527130-247
PaGL#37_03823108-227
PaGL#37_03829119-222
Methanospirillum.hungatei GP1, MhGP1 8064046803:MhGP1_0017726-120
8064048212:MhGP1_01551273-398
433-558
8064048397:MhGP1_0173142-145
8064048466:MhGP1_0179516-145
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11417:Mhun_00415273-398
432-558
Ga0065338_11600:Mhun_0060042-148
Ga0065338_111814:Mhun_0181635-133
MPOB, Sfum Sfum_0000771-203
639703351:Sfum_02660294-416
465-592
639703978:Sfum_0328928-152
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_106102:Spalm_01113286-413
463-587
Spalm_0099237-115
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112243:Swol_0219849-175
219-348
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13230:Szehn_01948285-412
462-586
Ga0124040_14227:Szehn_0237236-125
Szehn_0017049-177
221-350
Syntrophus aciditrophicus, SB 637859150:SYN_00784633-762
637860203:SYN_0177411-144
637860355:SYN_0191339-171
Syntrophus gentianae, DSM8423 Ga0074853_107129:Sgen_0128939-171
Ga0074853_106131:Sgen_01125624-754
Ga0074853_105167:Sgen_0098710-144
Mucilaginibacter gossypii, cycad 4 PaGL#42_0090511-144
PaGL#42_01092291-419
464-593
PaGL#42_0229534-166
PaGL#42_04365291-418
465-593
PaGL#42_04495123-204
Ruminococcus callidus, ATCC 27760 Rcal_01949292-418
465-590
Rcal_02766286-413
458-587
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA