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MLKi8_01633 Locus tags: • Sequence Length: 915

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850900900950950
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MLKi8_01628 MLKi8_01630 MLKi8_01631 MLKi8_01632 MLKi8_01633 MLKi8_01634 MLKi8_01635 MLKi8_01636 
    [PF04997]_[PF13522]_[PF01380]_[PF00623]_[PF01380]_[PF04983]_[PF05000]_[PF04998]

    [4:PF04997]_[60:PF13522]_[273:PF01380]_[311:PF00623]_[432:PF01380]_[491:PF04983]_[684:PF05000]_[794:PF04998]

    [1:IPR029055]_[1:IPR017932]_[3:IPR012758]_[4:IPR007080]_[201:IPR006592]_[239:IPR046348]_[269:IPR001347]_[273:IPR001347]_[279:IPR035466]_[311:IPR000722]_[423:IPR035490]_[427:IPR001347]_[432:IPR001347]_[491:IPR007066]_[566:IPR017896]_[684:IPR007083]_[794:IPR007081]

Looking for similar signatures in the working genomes

PF04997:RNA_pol_Rpb1_1. RNA polymerase Rpb1, domain 1

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515363.1:LOMAGDGF_003284-331
Clostridium acetobutylicum, DSM 1731 WP_010966420.1:FHOCHPCF_031853-331
Acetivibrio alkalicellulosi, DSM 17461 2510059748:NJMEOJLD_000124-331
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937180.1:NEIHKHHH_044614-331
Ruminococcus albus_7, DSM 20455 WP_013499493.1:HCIAFFOI_030065-332
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112500:GJLLLGJL_0245512-339
Paenibacillus guangzhouensis, KCTC 33171 WP_152395420.1:KDFAKKPF_044196-331
Clostridium acetobutylicum, ATCC 824 WP_010966420.1:OJAMHIDJ_031943-331
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697348.1:PROKKA_034104-331
Syntrophomonas erecta, DSM 16215 OINOEOOJ_023805-331
FD_25_22, AnGL7 AnGL7_0027014-342
FD_25_27, AnGL8 AnGL8_0297714-342
FD_MS_7_1, AnGL28 AnGL28_0287521-344
FD_SO4_25_1_F22, AnGL30 AnGL30_0084110-357
FD_SO4_37_1, AnGL2 AnGL2_0200421-344
FD_YE_25_21, AnGL21 AnGL21_0297814-342
FD_YE_37_3, AnGL26 AnGL26_0296310-354
FD_YE_37_8_2, AnGL3 AnGL3_0114110-354
FD_YE_37_9_2, AnGL4 AnGL4_0235610-336
Syntrophus buswellii, Sbus Sbus_0046715-343
Syntrophomonas curvata, Scurva Scurva_028145-331
Syntrophomonas erecta sporosyntropha, Sespor Sespor_011375-331
Syntrophomonas wolfei methylbutyratica, Swm Swm_0283812-339
Terrisporobacter hibernicus, AnGL54 AnGL54_032764-331
FD-25-21, AnGL21 AnGL21_0237314-342
Sunxiuqinia elliptica, AnGL22 AnGL22_0296010-354
Paraclostridium benzoelyticum, AnGL27 AnGL27_007434-332
FD-MS-7-8, AnGL9 AnGL9_0306322-345
FD-YE-37-9-3, AnGL29 AnGL29_0308110-336
Methylobacterium radiotolerans, GTSA1 PaGL#34_0416716-344
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0179110-356
Syntrophomonas erecta, GB-438 Ga0610585_023805-331
Variovorax sp., EBFNA2 PaGL#33_0062315-340
Variovorax paradoxus, 2u118 PaGL#32_0063015-340
Dietzia cinnamea, 55 PaGL#56_023956-417
Maridesulfovibrio salexigens, AnGL23 AnGL23_0204721-348
Exiguobacterium mexicanum, AnGL24 AnGL24_029805-331
Clostridium subterminale, CB-LS10-1 AnGL53_033574-332
Priestia megaterium, 10L1 PaGL#57_021345-331
PaGL#57_014004-338
Variovorax paradoxus, SPNA7 PaGL#43_0060515-340
Methanospirillum lacunae, Ki8-1 MLKi8_016334-310
Geodermatophilus sp., RDM14 PaGL#36_037976-417
Methylorubrum populi, CTY4 PaGL#39_0389415-344
Fictibacillus phosphorivorans, TY7 PaGL#38_005155-331
Methanospirillum hungatei, GP1 MhGP1_016634-310
Methanospirillum stamsii, Pt1 MLKi8_020454-310
Syntrophomonas wolfei, saponavida Swsap_009715-331
Bacillus subtilis, 30VD-1 PaGL#66_000605-331
Peribacillus frigoritolerans, 30N-5 PaGL#67_001435-331
Micromonospora inositola, Utrum1 PaGL#61_064236-417
Sphingomonas sp., CR2A3 PaGL#62_0140114-343
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001124-331
Niallia taxi, AG-1 PaGL#37_001326-331
Methanospirillum.hungatei GP1, MhGP1 8064047891:MhGP1_012404-310
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11886:Mhun_008854-310
MPOB, Sfum 639702317:Sfum_0159916-342
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_027295-332
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112500:Swol_0245512-339
Syntrophomonas zehnderi, OL-4 Szehn Szehn_010845-331
Syntrophus aciditrophicus, SB 637858602:SYN_0027715-343
Syntrophus gentianae, DSM8423 Sgen_0029115-343
Mucilaginibacter gossypii, cycad 4 PaGL#42_0007410-356
Ruminococcus callidus, ATCC 27760 Rcal_027894-331

PF13522:GATase_6. Glutamine amidotransferase domain

Found 230 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517455.1:LOMAGDGF_01045109-232
WP_003519132.1:LOMAGDGF_0113865-181
WP_003517621.1:LOMAGDGF_0173647-169
Clostridium acetobutylicum, DSM 1731 WP_013913644.1:FHOCHPCF_0018364-191
WP_010964701.1:FHOCHPCF_0144599-219
WP_010965541.1:FHOCHPCF_0228147-169
Acetivibrio alkalicellulosi, DSM 17461 2510060076:NJMEOJLD_00335142-272
2510061464:NJMEOJLD_0168847-168
2510062120:NJMEOJLD_0232263-191
2510062169:NJMEOJLD_02370108-232
2510063666:NJMEOJLD_0384475-196
Pseudobacteroides cellulosolvens, DSM 2933 WP_036941354.1:NEIHKHHH_0170849-166
WP_050753348.1:NEIHKHHH_0216247-168
WP_036947342.1:NEIHKHHH_0226994-215
WP_036938418.1:NEIHKHHH_0359564-185
WP_036937553.1:NEIHKHHH_0422674-196
WP_036935182.1:NEIHKHHH_0497749-166
Ruminococcus albus_7, DSM 20455 WP_013483902.1:HCIAFFOI_0405789-211
WP_013496898.1:HCIAFFOI_0014762-197
WP_013497008.1:HCIAFFOI_0026875-191
WP_013497699.1:HCIAFFOI_0103545-162
WP_013497825.1:HCIAFFOI_0116666-180
WP_013498186.1:HCIAFFOI_015746-95
WP_013498531.1:HCIAFFOI_0193045-164
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11741:GJLLLGJL_0072646-166
GJLLLGJL_01862109-227
Paenibacillus guangzhouensis, KCTC 33171 WP_152391661.1:KDFAKKPF_0005047-169
WP_152395387.1:KDFAKKPF_0434865-185
WP_152396551.1:KDFAKKPF_05747117-233
Clostridium acetobutylicum, ATCC 824 WP_010963484.1:OJAMHIDJ_0018364-191
WP_010964701.1:OJAMHIDJ_0144999-219
WP_010965541.1:OJAMHIDJ_0229047-169
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698154.1:PROKKA_0090548-169
WP_137698486.1:PROKKA_0125763-181
WP_137698347.1:PROKKA_02630107-230
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0003863-182
OINOEOOJ_00179100-216
OINOEOOJ_0141086-141
FD_25_22, AnGL7 AnGL7_0009966-174
AnGL7_0093947-166
AnGL7_0178563-194
AnGL7_0228247-167
FD_25_27, AnGL8 AnGL8_0203880-199
AnGL8_0249563-210
AnGL8_0303465-176
FD_MS_7_1, AnGL28 AnGL28_0238363-177
AnGL28_0243947-166
FD_SO4_25_1_F22, AnGL30 AnGL30_0178749-168
AnGL30_0199566-187
AnGL30_02224107-219
FD_SO4_37_1, AnGL2 AnGL2_0151263-177
AnGL2_0156847-166
FD_YE_25_21, AnGL21 AnGL21_0079547-166
AnGL21_0223163-199
AnGL21_0278165-174
FD_YE_37_3, AnGL26 AnGL26_01424143-277
AnGL26_0182562-194
AnGL26_0300447-166
FD_YE_37_8_2, AnGL3 AnGL3_0268147-164
AnGL3_0292362-193
AnGL3_0347845-163
FD_YE_37_9_2, AnGL4 AnGL4_0038190-216
AnGL4_0092763-184
Syntrophus buswellii, Sbus Sbus_0016780-208
Sbus_0165275-197
Sbus_02375330-489
Sbus_02718220-291
Sbus_0272679-210
Syntrophomonas curvata, Scurva Scurva_0084647-170
Scurva_0240878-210
Scurva_0257563-190
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00826100-216
Sespor_0096363-182
Sespor_0222948-102
Syntrophomonas wolfei methylbutyratica, Swm Swm_0081049-164
Swm_02129109-227
Terrisporobacter hibernicus, AnGL54 AnGL54_0388262-191
AnGL54_0298383-199
AnGL54_0302962-191
AnGL54_0380347-168
FD-25-21, AnGL21 AnGL21_0032347-167
AnGL21_0080463-206
AnGL21_0162247-166
AnGL21_0252166-174
Sunxiuqinia elliptica, AnGL22 AnGL22_01426143-277
AnGL22_0182262-194
AnGL22_0300147-166
Paraclostridium benzoelyticum, AnGL27 AnGL27_0045464-183
AnGL27_0199646-162
AnGL27_0254596-208
AnGL27_0361462-195
FD-MS-7-8, AnGL9 AnGL9_0218161-177
FD-YE-37-9-3, AnGL29 AnGL29_0110690-216
AnGL29_0165263-184
Methylobacterium radiotolerans, GTSA1 PaGL#34_0267863-179
PaGL#34_0351045-166
PaGL#34_0422586-217
PaGL#34_05183139-268
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0111561-188
PaGL#35_0144564-194
PaGL#35_0145942-159
PaGL#35_02129145-280
PaGL#35_0411049-169
Syntrophomonas erecta, GB-438 Ga0610585_0003863-182
Ga0610585_00179100-216
Ga0610585_0141086-141
Variovorax sp., EBFNA2 PaGL#33_0092760-183
PaGL#33_0457781-213
Variovorax paradoxus, 2u118 PaGL#32_0094061-183
PaGL#32_0386381-212
Dietzia cinnamea, 55 PaGL#56_00060141-270
PaGL#56_00753117-256
PaGL#56_0084667-198
PaGL#56_0120948-171
Maridesulfovibrio salexigens, AnGL23 AnGL23_0103884-204
AnGL23_0215043-163
AnGL23_0348451-174
AnGL23_0352362-176
Exiguobacterium mexicanum, AnGL24 AnGL24_0052061-184
AnGL24_0056492-209
AnGL24_0291760-184
Clostridium subterminale, CB-LS10-1 AnGL53_01584106-225
AnGL53_0167248-165
AnGL53_0328063-186
Priestia megaterium, 10L1 PaGL#57_0195873-204
PaGL#57_0029961-191
PaGL#57_0206560-192
PaGL#57_0678047-169
Variovorax paradoxus, SPNA7 PaGL#43_0093161-183
PaGL#43_0391081-212
Methanospirillum lacunae, Ki8-1 MLKi8_0123360-187
MLKi8_0140780-201
MLKi8_0158287-213
Geodermatophilus sp., RDM14 PaGL#36_0006546-166
PaGL#36_0184750-169
PaGL#36_0374268-202
PaGL#36_0403385-219
Methylorubrum populi, CTY4 PaGL#39_01428142-272
PaGL#39_03803105-221
PaGL#39_0403165-191
PaGL#39_0479245-166
Fictibacillus phosphorivorans, TY7 PaGL#38_0016550-168
PaGL#38_0058261-191
PaGL#38_0071375-204
PaGL#38_0197647-169
PaGL#38_0383350-167
Methanospirillum hungatei, GP1 MhGP1_0114380-201
MhGP1_0135260-187
Methanospirillum stamsii, Pt1 MLKi8_0079753-161
MLKi8_0080886-206
MLKi8_01444106-227
MLKi8_0163360-187
Syntrophomonas wolfei, saponavida Swsap_0092147-170
Swsap_0162966-193
Swsap_0187998-214
Swsap_0285074-192
Bacillus subtilis, 30VD-1 PaGL#66_0128450-168
PaGL#66_0308947-169
PaGL#66_0353271-205
PaGL#66_0400561-191
Peribacillus frigoritolerans, 30N-5 PaGL#67_0007260-192
PaGL#67_0206757-166
PaGL#67_0207487-206
PaGL#67_0388350-168
PaGL#67_0445247-169
PaGL#67_0521395-210
Micromonospora inositola, Utrum1 PaGL#61_0042085-218
PaGL#61_0112146-167
PaGL#61_0416246-166
PaGL#61_0429481-197
PaGL#61_0431443-109
PaGL#61_0511254-174
PaGL#61_0634377-216
Sphingomonas sp., CR2A3 PaGL#62_0019847-168
PaGL#62_0090497-213
PaGL#62_0364964-191
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0063347-168
AnGL54_0071162-191
AnGL54_0378683-199
AnGL54_0383262-191
Niallia taxi, AG-1 PaGL#37_0020060-192
PaGL#37_0041273-204
PaGL#37_0086547-169
PaGL#37_0507958-166
PaGL#37_0312350-167
Methanospirillum.hungatei GP1, MhGP1 8064048212:MhGP1_0155160-187
8064048426:MhGP1_0175980-201
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11417:Mhun_0041553-187
Ga0065338_11631:Mhun_0063164-196
MPOB, Sfum 639700760:Sfum_00008105-223
639701023:Sfum_0028174-195
639701728:Sfum_0100260-164
639703351:Sfum_0266064-192
639704615:Sfum_0394080-208
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11512:Spalm_0209547-168
Spalm_0236377-195
Ga0128340_106102:Spalm_0111363-190
Spalm_0020279-210
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11741:Swol_0072646-166
Swol_01862109-227
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13230:Szehn_0194864-190
Szehn_0112480-141
Ga0124040_14739:Szehn_02504106-222
Ga0124040_126172:Szehn_0140547-169
Syntrophus aciditrophicus, SB 637859150:SYN_00784337-496
637859937:SYN_0152375-197
637860048:SYN_0163072-155
SYN_0245710-130
637860962:SYN_0246951-175
637861404:SYN_0286778-208
Syntrophus gentianae, DSM8423 Ga0074853_12631:Sgen_0269675-197
Ga0074853_11340:Sgen_01892220-291
Ga0074853_11350:Sgen_0190281-211
Ga0074853_106131:Sgen_01125325-491
Mucilaginibacter gossypii, cycad 4 PaGL#42_0107842-158
PaGL#42_0109264-194
PaGL#42_0412149-169
PaGL#42_0436562-190
Ruminococcus callidus, ATCC 27760 Rcal_0030867-179
Rcal_0032344-164
Rcal_0148967-181
Rcal_0161192-215
Rcal_0161275-193
Rcal_0194963-196
Rcal_0198168-178
Rcal_0219667-179
Rcal_0224367-181
Rcal_0272147-168
Rcal_0276666-190
Rcal_0290367-179

PF01380:SIS. SIS domain

Found 402 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519132.1:LOMAGDGF_01138287-414
460-588
WP_003516200.1:LOMAGDGF_01565132-260
Clostridium acetobutylicum, DSM 1731 WP_013913644.1:FHOCHPCF_00183288-413
464-589
WP_010963499.1:FHOCHPCF_0020042-167
WP_010963515.1:FHOCHPCF_00217127-256
WP_010963719.1:FHOCHPCF_0044029-127
WP_010963852.1:FHOCHPCF_00577109-241
WP_010965155.1:FHOCHPCF_01892131-257
WP_010966335.1:FHOCHPCF_0310024-146
WP_010966694.1:FHOCHPCF_03478128-195
Acetivibrio alkalicellulosi, DSM 17461 2510061579:NJMEOJLD_01798131-258
2510062120:NJMEOJLD_02322291-413
461-589
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942195.1:NEIHKHHH_01485130-258
WP_036938418.1:NEIHKHHH_03595287-414
460-589
Ruminococcus albus_7, DSM 20455 WP_013496898.1:HCIAFFOI_00147297-420
464-590
WP_013498434.1:HCIAFFOI_01832128-255
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112243:GJLLLGJL_0219849-175
219-348
Paenibacillus guangzhouensis, KCTC 33171 WP_152391823.1:KDFAKKPF_0023211-144
WP_152391970.1:KDFAKKPF_00396136-261
WP_152391973.1:KDFAKKPF_003998-144
WP_193726528.1:KDFAKKPF_035534-140
WP_152394793.1:KDFAKKPF_03656132-260
WP_152395387.1:KDFAKKPF_04348288-412
462-591
WP_152395470.1:KDFAKKPF_0448418-146
WP_152396304.1:KDFAKKPF_0546730-137
WP_152396533.1:KDFAKKPF_05725126-255
WP_152396535.1:KDFAKKPF_0572733-163
WP_152396802.1:KDFAKKPF_0606044-170
210-299
WP_152397516.1:KDFAKKPF_06291131-259
WP_152397517.1:KDFAKKPF_0629241-167
WP_152397528.1:KDFAKKPF_06304126-254
Clostridium acetobutylicum, ATCC 824 WP_010963484.1:OJAMHIDJ_00183288-413
464-589
WP_010963499.1:OJAMHIDJ_0020042-167
WP_010963515.1:OJAMHIDJ_00217127-256
WP_010963719.1:OJAMHIDJ_0044129-127
WP_010963852.1:OJAMHIDJ_00578109-241
WP_010965155.1:OJAMHIDJ_01900131-257
WP_010966335.1:OJAMHIDJ_0310924-146
WP_010966694.1:OJAMHIDJ_03490128-195
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698486.1:PROKKA_01257291-414
460-590
WP_244648355.1:PROKKA_0143830-154
WP_137696117.1:PROKKA_0192339-158
203-326
WP_137696028.1:PROKKA_02019132-259
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00038286-411
464-587
OINOEOOJ_0049550-176
223-351
OINOEOOJ_0200139-126
FD_25_22, AnGL7 AnGL7_00099289-418
462-592
AnGL7_0065746-174
AnGL7_010309-144
AnGL7_0111814-146
AnGL7_01384124-252
AnGL7_0234836-168
AnGL7_0273443-166
AnGL7_0348337-168
AnGL7_03656131-254
FD_25_27, AnGL8 AnGL8_00117122-250
AnGL8_0122564-195
AnGL8_014409-145
AnGL8_0248822-146
AnGL8_0282544-171
AnGL8_029038-144
AnGL8_03034290-419
463-593
AnGL8_03042130-210
FD_MS_7_1, AnGL28 AnGL28_0072143-171
AnGL28_02383295-421
464-594
AnGL28_029447-142
FD_SO4_25_1_F22, AnGL30 AnGL30_0103548-176
AnGL30_01995296-424
471-598
FD_SO4_37_1, AnGL2 AnGL2_01512295-421
464-594
AnGL2_020737-142
AnGL2_0340043-171
FD_YE_25_21, AnGL21 AnGL21_0033039-170
AnGL21_0074011-146
AnGL21_01211123-252
AnGL21_01981133-255
AnGL21_02567136-217
AnGL21_02620128-258
AnGL21_0268615-144
AnGL21_027792-138
AnGL21_02781289-419
462-592
FD_YE_37_3, AnGL26 AnGL26_0035216-73
101-167
AnGL26_0121241-167
AnGL26_01825292-419
466-594
AnGL26_01942126-207
AnGL26_0292223-146
FD_YE_37_8_2, AnGL3 AnGL3_0104639-170
AnGL3_02923290-419
468-593
FD_YE_37_9_2, AnGL4 AnGL4_00049130-258
AnGL4_00919121-244
AnGL4_00927292-419
468-590
AnGL4_01130125-241
AnGL4_0159135-166
AnGL4_01592130-257
Syntrophus buswellii, Sbus Sbus_0115013-144
Sbus_0177739-171
Sbus_02375623-753
Syntrophomonas curvata, Scurva Scurva_0032838-117
Scurva_02575286-413
458-586
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0050950-176
223-351
Sespor_00963286-411
464-587
Sespor_0157139-126
Syntrophomonas wolfei methylbutyratica, Swm Swm_0024736-113
Swm_0261149-175
219-348
Terrisporobacter hibernicus, AnGL54 AnGL54_03882288-415
460-588
AnGL54_04050110-221
AnGL54_00606551-683
AnGL54_01485137-263
AnGL54_01846114-218
AnGL54_01847110-241
AnGL54_03029288-415
460-588
AnGL54_0366057-190
229-357
FD-25-21, AnGL21 AnGL21_01169124-252
AnGL21_0143714-146
AnGL21_015219-144
AnGL21_0194246-174
AnGL21_02521289-418
462-592
AnGL21_0291522-146
AnGL21_0348643-166
Sunxiuqinia elliptica, AnGL22 AnGL22_0035316-73
101-167
AnGL22_0121441-167
AnGL22_01822292-419
466-594
AnGL22_01939126-207
AnGL22_0291923-146
Paraclostridium benzoelyticum, AnGL27 AnGL27_00454289-415
460-590
AnGL27_01053107-206
AnGL27_0117242-142
AnGL27_01780115-216
AnGL27_0189858-192
227-338
AnGL27_02300115-223
AnGL27_02378136-262
AnGL27_03003124-255
AnGL27_03006129-211
FD-MS-7-8, AnGL9 AnGL9_0017239-170
AnGL9_02181297-421
464-593
AnGL9_031347-142
FD-YE-37-9-3, AnGL29 AnGL29_00774130-258
AnGL29_01644121-244
AnGL29_01652292-419
468-590
AnGL29_01855125-241
AnGL29_0231635-166
AnGL29_02317130-257
Methylobacterium radiotolerans, GTSA1 PaGL#34_0141824-145
PaGL#34_02678288-416
460-589
PaGL#34_03564134-257
PaGL#34_0477061-193
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00366121-204
PaGL#35_01115291-418
464-593
PaGL#35_01445292-419
466-594
PaGL#35_0368737-166
PaGL#35_0492710-141
PaGL#35_050548-141
Syntrophomonas erecta, GB-438 Ga0610585_00038286-411
464-587
Ga0610585_0049550-176
223-351
Ga0610585_0200139-126
Variovorax sp., EBFNA2 PaGL#33_06303126-255
PaGL#33_00927307-429
478-606
PaGL#33_01206126-255
PaGL#33_03292136-247
PaGL#33_04223138-251
PaGL#33_05108137-266
PaGL#33_0551621-145
PaGL#33_0605850-181
Variovorax paradoxus, 2u118 PaGL#32_00940307-429
478-606
PaGL#32_01181126-255
PaGL#32_02386138-247
PaGL#32_03710164-251
PaGL#32_0479021-145
PaGL#32_0527751-180
Dietzia cinnamea, 55 PaGL#56_00846294-420
466-600
PaGL#56_02369438-556
Maridesulfovibrio salexigens, AnGL23 AnGL23_0214417-148
AnGL23_0268168-167
AnGL23_0348541-173
AnGL23_03523293-417
462-550
Exiguobacterium mexicanum, AnGL24 AnGL24_00520285-411
459-580
AnGL24_02448113-231
AnGL24_02508127-256
AnGL24_02708126-207
AnGL24_02711127-255
AnGL24_02829127-242
AnGL24_02917285-411
454-580
Clostridium subterminale, CB-LS10-1 AnGL53_01616131-258
AnGL53_03280288-415
462-588
Priestia megaterium, 10L1 PaGL#57_00299287-414
456-583
PaGL#57_02065288-413
456-583
PaGL#57_0450829-137
PaGL#57_0505623-130
PaGL#57_062684-139
PaGL#57_06363119-232
PaGL#57_06412126-210
PaGL#57_06421129-259
PaGL#57_0653632-155
PaGL#57_06545126-256
PaGL#57_06546126-196
PaGL#57_06678126-255
Variovorax paradoxus, SPNA7 PaGL#43_00931307-429
478-606
PaGL#43_01178126-255
PaGL#43_02633138-247
PaGL#43_03751164-251
PaGL#43_0493621-145
PaGL#43_04949141-265
PaGL#43_049691-75
PaGL#43_0549351-180
Methanospirillum lacunae, Ki8-1 MLKi8_0055126-129
MLKi8_01233273-398
433-557
MLKi8_0247435-132
Geodermatophilus sp., RDM14 PaGL#36_0046733-165
PaGL#36_03742299-426
472-601
Methylorubrum populi, CTY4 PaGL#39_0367363-191
PaGL#39_04031292-415
458-589
PaGL#39_0422151-174
PaGL#39_04222121-203
Fictibacillus phosphorivorans, TY7 PaGL#38_00582288-415
458-584
PaGL#38_0274535-161
PaGL#38_0367245-165
PaGL#38_04245132-260
PaGL#38_04338111-235
PaGL#38_04434130-255
PaGL#38_04590127-256
Methanospirillum hungatei, GP1 MhGP1_0110716-145
MhGP1_0117142-145
MhGP1_01352273-398
433-558
MhGP1_0272626-120
Methanospirillum stamsii, Pt1 MLKi8_0141342-144
MLKi8_014789-145
MLKi8_01633273-399
432-558
MLKi8_0299335-126
Syntrophomonas wolfei, saponavida Swsap_0137839-126
Swsap_01629289-416
462-590
Bacillus subtilis, 30VD-1 PaGL#66_0104824-130
PaGL#66_03361109-218
PaGL#66_0384832-156
PaGL#66_04005287-413
456-583
PaGL#66_04018131-204
PaGL#66_04019126-256
Peribacillus frigoritolerans, 30N-5 PaGL#67_000313-138
PaGL#67_00072287-413
456-583
PaGL#67_0112935-151
PaGL#67_0127931-153
PaGL#67_01330130-236
PaGL#67_0251322-143
PaGL#67_02523129-257
PaGL#67_02561127-208
PaGL#67_02569127-256
PaGL#67_03343126-256
PaGL#67_03344130-209
PaGL#67_03617130-254
PaGL#67_0378837-141
PaGL#67_04689126-252
Micromonospora inositola, Utrum1 PaGL#61_0219022-145
PaGL#61_0235639-150
PaGL#61_02615137-262
PaGL#61_0377623-147
PaGL#61_0377838-172
PaGL#61_050595-145
PaGL#61_05060159-289
PaGL#61_057217-145
PaGL#61_0595246-177
PaGL#61_05953145-271
PaGL#61_0614242-167
211-331
PaGL#61_06343313-438
485-619
Sphingomonas sp., CR2A3 PaGL#62_0038563-187
221-305
PaGL#62_03649286-413
461-589
PaGL#62_0366034-160
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0049057-190
229-357
AnGL54_00711288-415
460-588
AnGL54_00879110-221
AnGL54_02292137-263
AnGL54_02650114-218
AnGL54_02651110-241
AnGL54_03832288-415
460-588
Niallia taxi, AG-1 PaGL#37_00200289-413
456-583
PaGL#37_041654-139
PaGL#37_05551129-238
PaGL#37_0023081-197
PaGL#37_0435835-149
PaGL#37_04387127-247
PaGL#37_04400126-256
PaGL#37_04605122-251
PaGL#37_00963127-255
PaGL#37_0097539-164
PaGL#37_04932126-230
PaGL#37_04941130-252
PaGL#37_04959127-256
PaGL#37_0106242-124
PaGL#37_05012104-203
PaGL#37_0110346-167
PaGL#37_0517016-116
PaGL#37_02138124-255
PaGL#37_0329932-155
PaGL#37_03527130-247
PaGL#37_03823108-227
PaGL#37_03829119-222
Methanospirillum.hungatei GP1, MhGP1 8064046803:MhGP1_0017726-120
8064048212:MhGP1_01551273-398
433-558
8064048397:MhGP1_0173142-145
8064048466:MhGP1_0179516-145
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11417:Mhun_00415273-398
432-558
Ga0065338_11600:Mhun_0060042-148
Ga0065338_111814:Mhun_0181635-133
MPOB, Sfum Sfum_0000771-203
639703351:Sfum_02660294-416
465-592
639703978:Sfum_0328928-152
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_106102:Spalm_01113286-413
463-587
Spalm_0099237-115
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112243:Swol_0219849-175
219-348
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13230:Szehn_01948285-412
462-586
Ga0124040_14227:Szehn_0237236-125
Szehn_0017049-177
221-350
Syntrophus aciditrophicus, SB 637859150:SYN_00784633-762
637860203:SYN_0177411-144
637860355:SYN_0191339-171
Syntrophus gentianae, DSM8423 Ga0074853_107129:Sgen_0128939-171
Ga0074853_106131:Sgen_01125624-754
Ga0074853_105167:Sgen_0098710-144
Mucilaginibacter gossypii, cycad 4 PaGL#42_0090511-144
PaGL#42_01092291-419
464-593
PaGL#42_0229534-166
PaGL#42_04365291-418
465-593
PaGL#42_04495123-204
Ruminococcus callidus, ATCC 27760 Rcal_01949292-418
465-590
Rcal_02766286-413
458-587

PF00623:RNA_pol_Rpb1_2. RNA polymerase Rpb1, domain 2

Found 103 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515363.1:LOMAGDGF_00328332-474
Clostridium acetobutylicum, DSM 1731 WP_010966420.1:FHOCHPCF_03185332-474
Acetivibrio alkalicellulosi, DSM 17461 2510059748:NJMEOJLD_00012332-474
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937180.1:NEIHKHHH_04461332-474
Ruminococcus albus_7, DSM 20455 WP_013499493.1:HCIAFFOI_03006333-475
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112500:GJLLLGJL_02455340-401
401-482
Paenibacillus guangzhouensis, KCTC 33171 WP_152395420.1:KDFAKKPF_04419332-386
377-474
Clostridium acetobutylicum, ATCC 824 WP_010966420.1:OJAMHIDJ_03194332-474
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697348.1:PROKKA_03410332-384
379-474
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02380332-474
FD_25_22, AnGL7 AnGL7_00270343-381
402-485
FD_25_27, AnGL8 AnGL8_02977343-396
389-485
FD_MS_7_1, AnGL28 AnGL28_02875345-393
388-487
FD_SO4_25_1_F22, AnGL30 AnGL30_00841358-413
411-500
FD_SO4_37_1, AnGL2 AnGL2_02004345-393
388-487
FD_YE_25_21, AnGL21 AnGL21_02978343-395
387-485
FD_YE_37_3, AnGL26 AnGL26_02963355-410
414-497
FD_YE_37_8_2, AnGL3 AnGL3_01141355-410
420-497
FD_YE_37_9_2, AnGL4 AnGL4_02356337-387
383-478
Syntrophus buswellii, Sbus Sbus_00467344-486
Syntrophomonas curvata, Scurva Scurva_02814332-394
389-474
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01137332-474
Syntrophomonas wolfei methylbutyratica, Swm Swm_02838340-401
401-482
Terrisporobacter hibernicus, AnGL54 AnGL54_03276332-377
381-474
FD-25-21, AnGL21 AnGL21_02373343-381
402-485
Sunxiuqinia elliptica, AnGL22 AnGL22_02960355-410
414-497
Paraclostridium benzoelyticum, AnGL27 AnGL27_00743333-378
383-475
FD-MS-7-8, AnGL9 AnGL9_03063346-394
389-488
FD-YE-37-9-3, AnGL29 AnGL29_03081337-387
383-478
Methylobacterium radiotolerans, GTSA1 PaGL#34_04167345-487
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01791357-412
421-499
Syntrophomonas erecta, GB-438 Ga0610585_02380332-474
Variovorax sp., EBFNA2 PaGL#33_00623341-393
389-483
Variovorax paradoxus, 2u118 PaGL#32_00630341-393
389-483
Dietzia cinnamea, 55 PaGL#56_02395418-462
466-560
Maridesulfovibrio salexigens, AnGL23 AnGL23_02047349-491
Exiguobacterium mexicanum, AnGL24 AnGL24_02980332-474
Clostridium subterminale, CB-LS10-1 AnGL53_03357333-380
378-475
Priestia megaterium, 10L1 PaGL#57_02134332-474
PaGL#57_01400339-481
Variovorax paradoxus, SPNA7 PaGL#43_00605341-393
389-483
Methanospirillum lacunae, Ki8-1 MLKi8_01633311-489
Geodermatophilus sp., RDM14 PaGL#36_03797418-463
466-560
Methylorubrum populi, CTY4 PaGL#39_03894345-487
Fictibacillus phosphorivorans, TY7 PaGL#38_00515332-387
378-474
Methanospirillum hungatei, GP1 MhGP1_01663311-488
Methanospirillum stamsii, Pt1 MLKi8_02045311-488
Syntrophomonas wolfei, saponavida Swsap_00971332-394
383-474
Bacillus subtilis, 30VD-1 PaGL#66_00060332-386
377-474
Peribacillus frigoritolerans, 30N-5 PaGL#67_00143332-474
Micromonospora inositola, Utrum1 PaGL#61_06423418-462
466-560
Sphingomonas sp., CR2A3 PaGL#62_01401344-392
388-486
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00112332-377
381-474
Niallia taxi, AG-1 PaGL#37_00132332-385
377-474
Methanospirillum.hungatei GP1, MhGP1 8064047891:MhGP1_01240311-488
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11886:Mhun_00885311-488
MPOB, Sfum 639702317:Sfum_01599343-485
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02729333-396
382-475
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112500:Swol_02455340-401
401-482
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01084332-394
383-474
Syntrophus aciditrophicus, SB 637858602:SYN_00277344-486
Syntrophus gentianae, DSM8423 Sgen_00291344-486
Mucilaginibacter gossypii, cycad 4 PaGL#42_00074357-412
421-499
Ruminococcus callidus, ATCC 27760 Rcal_02789332-381
396-474

PF01380:SIS. SIS domain

Found 402 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519132.1:LOMAGDGF_01138287-414
460-588
WP_003516200.1:LOMAGDGF_01565132-260
Clostridium acetobutylicum, DSM 1731 WP_013913644.1:FHOCHPCF_00183288-413
464-589
WP_010963499.1:FHOCHPCF_0020042-167
WP_010963515.1:FHOCHPCF_00217127-256
WP_010963719.1:FHOCHPCF_0044029-127
WP_010963852.1:FHOCHPCF_00577109-241
WP_010965155.1:FHOCHPCF_01892131-257
WP_010966335.1:FHOCHPCF_0310024-146
WP_010966694.1:FHOCHPCF_03478128-195
Acetivibrio alkalicellulosi, DSM 17461 2510061579:NJMEOJLD_01798131-258
2510062120:NJMEOJLD_02322291-413
461-589
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942195.1:NEIHKHHH_01485130-258
WP_036938418.1:NEIHKHHH_03595287-414
460-589
Ruminococcus albus_7, DSM 20455 WP_013496898.1:HCIAFFOI_00147297-420
464-590
WP_013498434.1:HCIAFFOI_01832128-255
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112243:GJLLLGJL_0219849-175
219-348
Paenibacillus guangzhouensis, KCTC 33171 WP_152391823.1:KDFAKKPF_0023211-144
WP_152391970.1:KDFAKKPF_00396136-261
WP_152391973.1:KDFAKKPF_003998-144
WP_193726528.1:KDFAKKPF_035534-140
WP_152394793.1:KDFAKKPF_03656132-260
WP_152395387.1:KDFAKKPF_04348288-412
462-591
WP_152395470.1:KDFAKKPF_0448418-146
WP_152396304.1:KDFAKKPF_0546730-137
WP_152396533.1:KDFAKKPF_05725126-255
WP_152396535.1:KDFAKKPF_0572733-163
WP_152396802.1:KDFAKKPF_0606044-170
210-299
WP_152397516.1:KDFAKKPF_06291131-259
WP_152397517.1:KDFAKKPF_0629241-167
WP_152397528.1:KDFAKKPF_06304126-254
Clostridium acetobutylicum, ATCC 824 WP_010963484.1:OJAMHIDJ_00183288-413
464-589
WP_010963499.1:OJAMHIDJ_0020042-167
WP_010963515.1:OJAMHIDJ_00217127-256
WP_010963719.1:OJAMHIDJ_0044129-127
WP_010963852.1:OJAMHIDJ_00578109-241
WP_010965155.1:OJAMHIDJ_01900131-257
WP_010966335.1:OJAMHIDJ_0310924-146
WP_010966694.1:OJAMHIDJ_03490128-195
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698486.1:PROKKA_01257291-414
460-590
WP_244648355.1:PROKKA_0143830-154
WP_137696117.1:PROKKA_0192339-158
203-326
WP_137696028.1:PROKKA_02019132-259
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00038286-411
464-587
OINOEOOJ_0049550-176
223-351
OINOEOOJ_0200139-126
FD_25_22, AnGL7 AnGL7_00099289-418
462-592
AnGL7_0065746-174
AnGL7_010309-144
AnGL7_0111814-146
AnGL7_01384124-252
AnGL7_0234836-168
AnGL7_0273443-166
AnGL7_0348337-168
AnGL7_03656131-254
FD_25_27, AnGL8 AnGL8_00117122-250
AnGL8_0122564-195
AnGL8_014409-145
AnGL8_0248822-146
AnGL8_0282544-171
AnGL8_029038-144
AnGL8_03034290-419
463-593
AnGL8_03042130-210
FD_MS_7_1, AnGL28 AnGL28_0072143-171
AnGL28_02383295-421
464-594
AnGL28_029447-142
FD_SO4_25_1_F22, AnGL30 AnGL30_0103548-176
AnGL30_01995296-424
471-598
FD_SO4_37_1, AnGL2 AnGL2_01512295-421
464-594
AnGL2_020737-142
AnGL2_0340043-171
FD_YE_25_21, AnGL21 AnGL21_0033039-170
AnGL21_0074011-146
AnGL21_01211123-252
AnGL21_01981133-255
AnGL21_02567136-217
AnGL21_02620128-258
AnGL21_0268615-144
AnGL21_027792-138
AnGL21_02781289-419
462-592
FD_YE_37_3, AnGL26 AnGL26_0035216-73
101-167
AnGL26_0121241-167
AnGL26_01825292-419
466-594
AnGL26_01942126-207
AnGL26_0292223-146
FD_YE_37_8_2, AnGL3 AnGL3_0104639-170
AnGL3_02923290-419
468-593
FD_YE_37_9_2, AnGL4 AnGL4_00049130-258
AnGL4_00919121-244
AnGL4_00927292-419
468-590
AnGL4_01130125-241
AnGL4_0159135-166
AnGL4_01592130-257
Syntrophus buswellii, Sbus Sbus_0115013-144
Sbus_0177739-171
Sbus_02375623-753
Syntrophomonas curvata, Scurva Scurva_0032838-117
Scurva_02575286-413
458-586
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0050950-176
223-351
Sespor_00963286-411
464-587
Sespor_0157139-126
Syntrophomonas wolfei methylbutyratica, Swm Swm_0024736-113
Swm_0261149-175
219-348
Terrisporobacter hibernicus, AnGL54 AnGL54_03882288-415
460-588
AnGL54_04050110-221
AnGL54_00606551-683
AnGL54_01485137-263
AnGL54_01846114-218
AnGL54_01847110-241
AnGL54_03029288-415
460-588
AnGL54_0366057-190
229-357
FD-25-21, AnGL21 AnGL21_01169124-252
AnGL21_0143714-146
AnGL21_015219-144
AnGL21_0194246-174
AnGL21_02521289-418
462-592
AnGL21_0291522-146
AnGL21_0348643-166
Sunxiuqinia elliptica, AnGL22 AnGL22_0035316-73
101-167
AnGL22_0121441-167
AnGL22_01822292-419
466-594
AnGL22_01939126-207
AnGL22_0291923-146
Paraclostridium benzoelyticum, AnGL27 AnGL27_00454289-415
460-590
AnGL27_01053107-206
AnGL27_0117242-142
AnGL27_01780115-216
AnGL27_0189858-192
227-338
AnGL27_02300115-223
AnGL27_02378136-262
AnGL27_03003124-255
AnGL27_03006129-211
FD-MS-7-8, AnGL9 AnGL9_0017239-170
AnGL9_02181297-421
464-593
AnGL9_031347-142
FD-YE-37-9-3, AnGL29 AnGL29_00774130-258
AnGL29_01644121-244
AnGL29_01652292-419
468-590
AnGL29_01855125-241
AnGL29_0231635-166
AnGL29_02317130-257
Methylobacterium radiotolerans, GTSA1 PaGL#34_0141824-145
PaGL#34_02678288-416
460-589
PaGL#34_03564134-257
PaGL#34_0477061-193
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00366121-204
PaGL#35_01115291-418
464-593
PaGL#35_01445292-419
466-594
PaGL#35_0368737-166
PaGL#35_0492710-141
PaGL#35_050548-141
Syntrophomonas erecta, GB-438 Ga0610585_00038286-411
464-587
Ga0610585_0049550-176
223-351
Ga0610585_0200139-126
Variovorax sp., EBFNA2 PaGL#33_06303126-255
PaGL#33_00927307-429
478-606
PaGL#33_01206126-255
PaGL#33_03292136-247
PaGL#33_04223138-251
PaGL#33_05108137-266
PaGL#33_0551621-145
PaGL#33_0605850-181
Variovorax paradoxus, 2u118 PaGL#32_00940307-429
478-606
PaGL#32_01181126-255
PaGL#32_02386138-247
PaGL#32_03710164-251
PaGL#32_0479021-145
PaGL#32_0527751-180
Dietzia cinnamea, 55 PaGL#56_00846294-420
466-600
PaGL#56_02369438-556
Maridesulfovibrio salexigens, AnGL23 AnGL23_0214417-148
AnGL23_0268168-167
AnGL23_0348541-173
AnGL23_03523293-417
462-550
Exiguobacterium mexicanum, AnGL24 AnGL24_00520285-411
459-580
AnGL24_02448113-231
AnGL24_02508127-256
AnGL24_02708126-207
AnGL24_02711127-255
AnGL24_02829127-242
AnGL24_02917285-411
454-580
Clostridium subterminale, CB-LS10-1 AnGL53_01616131-258
AnGL53_03280288-415
462-588
Priestia megaterium, 10L1 PaGL#57_00299287-414
456-583
PaGL#57_02065288-413
456-583
PaGL#57_0450829-137
PaGL#57_0505623-130
PaGL#57_062684-139
PaGL#57_06363119-232
PaGL#57_06412126-210
PaGL#57_06421129-259
PaGL#57_0653632-155
PaGL#57_06545126-256
PaGL#57_06546126-196
PaGL#57_06678126-255
Variovorax paradoxus, SPNA7 PaGL#43_00931307-429
478-606
PaGL#43_01178126-255
PaGL#43_02633138-247
PaGL#43_03751164-251
PaGL#43_0493621-145
PaGL#43_04949141-265
PaGL#43_049691-75
PaGL#43_0549351-180
Methanospirillum lacunae, Ki8-1 MLKi8_0055126-129
MLKi8_01233273-398
433-557
MLKi8_0247435-132
Geodermatophilus sp., RDM14 PaGL#36_0046733-165
PaGL#36_03742299-426
472-601
Methylorubrum populi, CTY4 PaGL#39_0367363-191
PaGL#39_04031292-415
458-589
PaGL#39_0422151-174
PaGL#39_04222121-203
Fictibacillus phosphorivorans, TY7 PaGL#38_00582288-415
458-584
PaGL#38_0274535-161
PaGL#38_0367245-165
PaGL#38_04245132-260
PaGL#38_04338111-235
PaGL#38_04434130-255
PaGL#38_04590127-256
Methanospirillum hungatei, GP1 MhGP1_0110716-145
MhGP1_0117142-145
MhGP1_01352273-398
433-558
MhGP1_0272626-120
Methanospirillum stamsii, Pt1 MLKi8_0141342-144
MLKi8_014789-145
MLKi8_01633273-399
432-558
MLKi8_0299335-126
Syntrophomonas wolfei, saponavida Swsap_0137839-126
Swsap_01629289-416
462-590
Bacillus subtilis, 30VD-1 PaGL#66_0104824-130
PaGL#66_03361109-218
PaGL#66_0384832-156
PaGL#66_04005287-413
456-583
PaGL#66_04018131-204
PaGL#66_04019126-256
Peribacillus frigoritolerans, 30N-5 PaGL#67_000313-138
PaGL#67_00072287-413
456-583
PaGL#67_0112935-151
PaGL#67_0127931-153
PaGL#67_01330130-236
PaGL#67_0251322-143
PaGL#67_02523129-257
PaGL#67_02561127-208
PaGL#67_02569127-256
PaGL#67_03343126-256
PaGL#67_03344130-209
PaGL#67_03617130-254
PaGL#67_0378837-141
PaGL#67_04689126-252
Micromonospora inositola, Utrum1 PaGL#61_0219022-145
PaGL#61_0235639-150
PaGL#61_02615137-262
PaGL#61_0377623-147
PaGL#61_0377838-172
PaGL#61_050595-145
PaGL#61_05060159-289
PaGL#61_057217-145
PaGL#61_0595246-177
PaGL#61_05953145-271
PaGL#61_0614242-167
211-331
PaGL#61_06343313-438
485-619
Sphingomonas sp., CR2A3 PaGL#62_0038563-187
221-305
PaGL#62_03649286-413
461-589
PaGL#62_0366034-160
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0049057-190
229-357
AnGL54_00711288-415
460-588
AnGL54_00879110-221
AnGL54_02292137-263
AnGL54_02650114-218
AnGL54_02651110-241
AnGL54_03832288-415
460-588
Niallia taxi, AG-1 PaGL#37_00200289-413
456-583
PaGL#37_041654-139
PaGL#37_05551129-238
PaGL#37_0023081-197
PaGL#37_0435835-149
PaGL#37_04387127-247
PaGL#37_04400126-256
PaGL#37_04605122-251
PaGL#37_00963127-255
PaGL#37_0097539-164
PaGL#37_04932126-230
PaGL#37_04941130-252
PaGL#37_04959127-256
PaGL#37_0106242-124
PaGL#37_05012104-203
PaGL#37_0110346-167
PaGL#37_0517016-116
PaGL#37_02138124-255
PaGL#37_0329932-155
PaGL#37_03527130-247
PaGL#37_03823108-227
PaGL#37_03829119-222
Methanospirillum.hungatei GP1, MhGP1 8064046803:MhGP1_0017726-120
8064048212:MhGP1_01551273-398
433-558
8064048397:MhGP1_0173142-145
8064048466:MhGP1_0179516-145
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11417:Mhun_00415273-398
432-558
Ga0065338_11600:Mhun_0060042-148
Ga0065338_111814:Mhun_0181635-133
MPOB, Sfum Sfum_0000771-203
639703351:Sfum_02660294-416
465-592
639703978:Sfum_0328928-152
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_106102:Spalm_01113286-413
463-587
Spalm_0099237-115
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112243:Swol_0219849-175
219-348
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13230:Szehn_01948285-412
462-586
Ga0124040_14227:Szehn_0237236-125
Szehn_0017049-177
221-350
Syntrophus aciditrophicus, SB 637859150:SYN_00784633-762
637860203:SYN_0177411-144
637860355:SYN_0191339-171
Syntrophus gentianae, DSM8423 Ga0074853_107129:Sgen_0128939-171
Ga0074853_106131:Sgen_01125624-754
Ga0074853_105167:Sgen_0098710-144
Mucilaginibacter gossypii, cycad 4 PaGL#42_0090511-144
PaGL#42_01092291-419
464-593
PaGL#42_0229534-166
PaGL#42_04365291-418
465-593
PaGL#42_04495123-204
Ruminococcus callidus, ATCC 27760 Rcal_01949292-418
465-590
Rcal_02766286-413
458-587

PF04983:RNA_pol_Rpb1_3. RNA polymerase Rpb1, domain 3

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515363.1:LOMAGDGF_00328477-639
Clostridium acetobutylicum, DSM 1731 WP_010966420.1:FHOCHPCF_03185477-639
Acetivibrio alkalicellulosi, DSM 17461 2510059748:NJMEOJLD_00012477-639
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937180.1:NEIHKHHH_04461477-639
Ruminococcus albus_7, DSM 20455 WP_013499493.1:HCIAFFOI_03006478-639
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112500:GJLLLGJL_02455485-646
Paenibacillus guangzhouensis, KCTC 33171 WP_152395420.1:KDFAKKPF_04419477-664
Clostridium acetobutylicum, ATCC 824 WP_010966420.1:OJAMHIDJ_03194477-639
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697348.1:PROKKA_03410477-639
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02380477-631
FD_25_22, AnGL7 AnGL7_00270488-644
FD_25_27, AnGL8 AnGL8_02977488-644
FD_MS_7_1, AnGL28 AnGL28_02875490-653
FD_SO4_25_1_F22, AnGL30 AnGL30_00841503-653
FD_SO4_37_1, AnGL2 AnGL2_02004490-653
FD_YE_25_21, AnGL21 AnGL21_02978488-644
FD_YE_37_3, AnGL26 AnGL26_02963500-650
FD_YE_37_8_2, AnGL3 AnGL3_01141500-650
FD_YE_37_9_2, AnGL4 AnGL4_02356482-644
Syntrophus buswellii, Sbus Sbus_00467489-630
Syntrophomonas curvata, Scurva Scurva_02814477-638
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01137477-631
Syntrophomonas wolfei methylbutyratica, Swm Swm_02838485-646
Terrisporobacter hibernicus, AnGL54 AnGL54_03276477-635
FD-25-21, AnGL21 AnGL21_02373488-644
Sunxiuqinia elliptica, AnGL22 AnGL22_02960500-650
Paraclostridium benzoelyticum, AnGL27 AnGL27_00743478-636
FD-MS-7-8, AnGL9 AnGL9_03063491-654
FD-YE-37-9-3, AnGL29 AnGL29_03081482-644
Methylobacterium radiotolerans, GTSA1 PaGL#34_04167490-654
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01791502-657
Syntrophomonas erecta, GB-438 Ga0610585_02380477-631
Variovorax sp., EBFNA2 PaGL#33_00623486-643
Variovorax paradoxus, 2u118 PaGL#32_00630486-643
Dietzia cinnamea, 55 PaGL#56_02395563-735
Maridesulfovibrio salexigens, AnGL23 AnGL23_02047494-637
Exiguobacterium mexicanum, AnGL24 AnGL24_02980477-663
Clostridium subterminale, CB-LS10-1 AnGL53_03357478-640
Priestia megaterium, 10L1 PaGL#57_02134477-663
PaGL#57_01400484-659
Variovorax paradoxus, SPNA7 PaGL#43_00605486-643
Methanospirillum lacunae, Ki8-1 MLKi8_01633491-656
Geodermatophilus sp., RDM14 PaGL#36_03797563-732
Methylorubrum populi, CTY4 PaGL#39_03894490-654
Fictibacillus phosphorivorans, TY7 PaGL#38_00515477-663
Methanospirillum hungatei, GP1 MhGP1_01663491-656
Methanospirillum stamsii, Pt1 MLKi8_02045491-656
Syntrophomonas wolfei, saponavida Swsap_00971477-630
Bacillus subtilis, 30VD-1 PaGL#66_00060477-663
Peribacillus frigoritolerans, 30N-5 PaGL#67_00143477-663
Micromonospora inositola, Utrum1 PaGL#61_06423563-728
Sphingomonas sp., CR2A3 PaGL#62_01401489-643
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00112477-635
Niallia taxi, AG-1 PaGL#37_00132477-663
Methanospirillum.hungatei GP1, MhGP1 8064047891:MhGP1_01240491-656
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11886:Mhun_00885491-656
MPOB, Sfum 639702317:Sfum_01599488-631
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02729478-640
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112500:Swol_02455485-646
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01084477-638
Syntrophus aciditrophicus, SB 637858602:SYN_00277489-630
Syntrophus gentianae, DSM8423 Sgen_00291489-630
Mucilaginibacter gossypii, cycad 4 PaGL#42_00074502-657
Ruminococcus callidus, ATCC 27760 Rcal_02789477-638

PF05000:RNA_pol_Rpb1_4. RNA polymerase Rpb1, domain 4

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515363.1:LOMAGDGF_00328667-736
Clostridium acetobutylicum, DSM 1731 WP_010966420.1:FHOCHPCF_03185667-734
Acetivibrio alkalicellulosi, DSM 17461 2510059748:NJMEOJLD_00012668-740
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937180.1:NEIHKHHH_04461667-743
Ruminococcus albus_7, DSM 20455 WP_013499493.1:HCIAFFOI_03006675-732
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112500:GJLLLGJL_02455677-743
Paenibacillus guangzhouensis, KCTC 33171 WP_152395420.1:KDFAKKPF_04419692-761
Clostridium acetobutylicum, ATCC 824 WP_010966420.1:OJAMHIDJ_03194667-734
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697348.1:PROKKA_03410667-743
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02380662-728
FD_25_22, AnGL7 AnGL7_00270673-763
FD_25_27, AnGL8 AnGL8_02977673-763
FD_MS_7_1, AnGL28 AnGL28_02875681-762
FD_SO4_25_1_F22, AnGL30 AnGL30_00841681-767
FD_SO4_37_1, AnGL2 AnGL2_02004681-762
FD_YE_25_21, AnGL21 AnGL21_02978673-763
FD_YE_37_3, AnGL26 AnGL26_02963678-764
FD_YE_37_8_2, AnGL3 AnGL3_01141678-764
FD_YE_37_9_2, AnGL4 AnGL4_02356655-749
Syntrophus buswellii, Sbus Sbus_00467660-750
Syntrophomonas curvata, Scurva Scurva_02814673-735
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01137662-728
Syntrophomonas wolfei methylbutyratica, Swm Swm_02838677-743
Terrisporobacter hibernicus, AnGL54 AnGL54_03276663-727
FD-25-21, AnGL21 AnGL21_02373673-763
Sunxiuqinia elliptica, AnGL22 AnGL22_02960678-764
Paraclostridium benzoelyticum, AnGL27 AnGL27_00743664-728
FD-MS-7-8, AnGL9 AnGL9_03063682-763
FD-YE-37-9-3, AnGL29 AnGL29_03081655-749
Methylobacterium radiotolerans, GTSA1 PaGL#34_04167682-769
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01791685-770
Syntrophomonas erecta, GB-438 Ga0610585_02380662-728
Variovorax sp., EBFNA2 PaGL#33_00623672-762
Variovorax paradoxus, 2u118 PaGL#32_00630672-762
Dietzia cinnamea, 55 PaGL#56_02395763-826
Maridesulfovibrio salexigens, AnGL23 AnGL23_02047665-755
Exiguobacterium mexicanum, AnGL24 AnGL24_02980691-760
Clostridium subterminale, CB-LS10-1 AnGL53_03357668-735
Priestia megaterium, 10L1 PaGL#57_02134691-760
PaGL#57_01400688-756
Variovorax paradoxus, SPNA7 PaGL#43_00605672-762
Methanospirillum lacunae, Ki8-1 MLKi8_01633684-788
Geodermatophilus sp., RDM14 PaGL#36_03797760-827
Methylorubrum populi, CTY4 PaGL#39_03894682-769
Fictibacillus phosphorivorans, TY7 PaGL#38_00515691-760
Methanospirillum hungatei, GP1 MhGP1_01663683-788
Methanospirillum stamsii, Pt1 MLKi8_02045683-788
Syntrophomonas wolfei, saponavida Swsap_00971665-727
Bacillus subtilis, 30VD-1 PaGL#66_00060691-760
Peribacillus frigoritolerans, 30N-5 PaGL#67_00143691-760
Micromonospora inositola, Utrum1 PaGL#61_06423757-823
Sphingomonas sp., CR2A3 PaGL#62_01401671-758
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00112663-727
Niallia taxi, AG-1 PaGL#37_00132691-759
Methanospirillum.hungatei GP1, MhGP1 8064047891:MhGP1_01240683-788
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11886:Mhun_00885683-788
MPOB, Sfum 639702317:Sfum_01599659-750
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02729669-737
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112500:Swol_02455677-743
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01084667-735
Syntrophus aciditrophicus, SB 637858602:SYN_00277660-750
Syntrophus gentianae, DSM8423 Sgen_00291660-750
Mucilaginibacter gossypii, cycad 4 PaGL#42_00074685-770
Ruminococcus callidus, ATCC 27760 Rcal_02789678-730

PF04998:RNA_pol_Rpb1_5. RNA polymerase Rpb1, domain 5

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515363.1:LOMAGDGF_00328745-1103
Clostridium acetobutylicum, DSM 1731 WP_010966420.1:FHOCHPCF_03185745-1103
Acetivibrio alkalicellulosi, DSM 17461 2510059748:NJMEOJLD_00012745-1104
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937180.1:NEIHKHHH_04461745-1104
Ruminococcus albus_7, DSM 20455 WP_013499493.1:HCIAFFOI_03006747-1122
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112500:GJLLLGJL_02455753-948
981-1114
Paenibacillus guangzhouensis, KCTC 33171 WP_152395420.1:KDFAKKPF_04419770-1136
Clostridium acetobutylicum, ATCC 824 WP_010966420.1:OJAMHIDJ_03194745-1103
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697348.1:PROKKA_03410745-1104
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02380738-944
967-1099
FD_25_22, AnGL7 AnGL7_00270765-1315
FD_25_27, AnGL8 AnGL8_02977765-1314
FD_MS_7_1, AnGL28 AnGL28_02875771-1305
FD_SO4_25_1_F22, AnGL30 AnGL30_00841769-1272
FD_SO4_37_1, AnGL2 AnGL2_02004771-1305
FD_YE_25_21, AnGL21 AnGL21_02978765-1314
FD_YE_37_3, AnGL26 AnGL26_02963766-1273
FD_YE_37_8_2, AnGL3 AnGL3_01141766-1304
FD_YE_37_9_2, AnGL4 AnGL4_02356750-1115
Syntrophus buswellii, Sbus Sbus_00467752-1296
Syntrophomonas curvata, Scurva Scurva_02814745-955
982-1106
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01137738-944
967-1099
Syntrophomonas wolfei methylbutyratica, Swm Swm_02838753-948
979-1114
Terrisporobacter hibernicus, AnGL54 AnGL54_03276741-1100
FD-25-21, AnGL21 AnGL21_02373765-1315
Sunxiuqinia elliptica, AnGL22 AnGL22_02960766-1273
Paraclostridium benzoelyticum, AnGL27 AnGL27_00743742-935
966-1101
FD-MS-7-8, AnGL9 AnGL9_03063772-1306
FD-YE-37-9-3, AnGL29 AnGL29_03081750-1115
Methylobacterium radiotolerans, GTSA1 PaGL#34_04167771-1317
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01791772-1346
Syntrophomonas erecta, GB-438 Ga0610585_02380738-944
967-1099
Variovorax sp., EBFNA2 PaGL#33_00623764-1314
Variovorax paradoxus, 2u118 PaGL#32_00630764-1311
Dietzia cinnamea, 55 PaGL#56_02395841-1221
Maridesulfovibrio salexigens, AnGL23 AnGL23_02047759-1303
Exiguobacterium mexicanum, AnGL24 AnGL24_02980769-979
998-1128
Clostridium subterminale, CB-LS10-1 AnGL53_03357746-1104
Priestia megaterium, 10L1 PaGL#57_02134769-1129
PaGL#57_01400767-1091
Variovorax paradoxus, SPNA7 PaGL#43_00605764-1311
Methanospirillum lacunae, Ki8-1 MLKi8_01633794-872
MLKi8_01634323-609
Geodermatophilus sp., RDM14 PaGL#36_03797838-1201
Methylorubrum populi, CTY4 PaGL#39_03894771-1317
Fictibacillus phosphorivorans, TY7 PaGL#38_00515769-994
1008-1129
Methanospirillum hungatei, GP1 MhGP1_01663794-860
MhGP1_01664275-599
Methanospirillum stamsii, Pt1 MLKi8_02045794-860
MLKi8_02046277-602
Syntrophomonas wolfei, saponavida Swsap_00971737-1098
Bacillus subtilis, 30VD-1 PaGL#66_00060769-1129
Peribacillus frigoritolerans, 30N-5 PaGL#67_00143769-997
1015-1129
Micromonospora inositola, Utrum1 PaGL#61_06423834-1197
Sphingomonas sp., CR2A3 PaGL#62_01401760-1300
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00112741-1100
Niallia taxi, AG-1 PaGL#37_00132769-981
994-1129
Methanospirillum.hungatei GP1, MhGP1 8064047890:MhGP1_01239275-599
8064047891:MhGP1_01240794-860
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11886:Mhun_00885794-860
Ga0065338_11887:Mhun_00886277-599
MPOB, Sfum 639702317:Sfum_01599752-1296
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02729747-950
981-1108
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112500:Swol_02455753-948
981-1114
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01084745-1106
Syntrophus aciditrophicus, SB 637858602:SYN_00277752-1296
Syntrophus gentianae, DSM8423 Sgen_00291752-1296
Mucilaginibacter gossypii, cycad 4 PaGL#42_00074772-1347
Ruminococcus callidus, ATCC 27760 Rcal_02789745-1112
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