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Spalm_01350 Locus tags: • Sequence Length: 336

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200250250300300350350
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Spalm_02524 Spalm_02142 unknown Spalm_01615 Spalm_02372 Spalm_01350 Spalm_00928 Spalm_02215 Spalm_00574 Spalm_01616 Spalm_01072 
    [PF13412]_[PF00294]

    [6:PF13412]_[61:PF00294]

    [3:IPR036390]_[61:IPR011611]_[62:IPR029056]

Looking for similar signatures in the working genomes

PF13412:HTH_24. Winged helix-turn-helix DNA-binding

Found 205 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003521161.1:LOMAGDGF_0188815-59
WP_003512628.1:LOMAGDGF_019162-43
Clostridium acetobutylicum, DSM 1731 WP_010966934.1:FHOCHPCF_037327-53
WP_010964251.1:FHOCHPCF_009814-51
WP_010964295.1:FHOCHPCF_010297-55
WP_010964776.1:FHOCHPCF_015182-50
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940900.1:NEIHKHHH_0087216-59
Ruminococcus albus_7, DSM 20455 WP_013483952.1:HCIAFFOI_04107169-198
WP_013498405.1:HCIAFFOI_018032-44
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111336:GJLLLGJL_013055-49
Paenibacillus guangzhouensis, KCTC 33171 WP_152394542.1:KDFAKKPF_033640-48
WP_152394623.1:KDFAKKPF_0345717-57
WP_227793253.1:KDFAKKPF_036350-47
WP_152395945.1:KDFAKKPF_050580-48
Clostridium acetobutylicum, ATCC 824 WP_010964251.1:OJAMHIDJ_009844-51
WP_010964295.1:OJAMHIDJ_010327-55
WP_010964776.1:OJAMHIDJ_015222-50
WP_010966934.1:OJAMHIDJ_037447-53
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698683.1:PROKKA_023035-52
WP_137698837.1:PROKKA_026772-43
WP_137698632.1:PROKKA_036626-47
WP_137698805.1:PROKKA_0370520-60
Syntrophomonas erecta, DSM 16215 OINOEOOJ_006077-49
FD_25_22, AnGL7 AnGL7_000080-47
AnGL7_002732-49
AnGL7_007053-47
FD_25_27, AnGL8 AnGL8_002243-49
AnGL8_002494-52
AnGL8_00822438-485
AnGL8_0204710-58
FD_MS_7_1, AnGL28 AnGL28_0125720-61
FD_SO4_37_1, AnGL2 AnGL2_0038720-61
FD_YE_25_21, AnGL21 AnGL21_0380910-57
AnGL21_0096411-58
AnGL21_010927-53
AnGL21_020001-48
AnGL21_021042-49
AnGL21_033670-48
FD_YE_37_3, AnGL26 AnGL26_0064122-66
AnGL26_0064421-66
FD_YE_37_9_2, AnGL4 AnGL4_0117110-55
AnGL4_0124126-56
AnGL4_0279116-59
AnGL4_033776-45
Syntrophus buswellii, Sbus Sbus_00778409-455
Syntrophomonas curvata, Scurva Scurva_0067021-50
Scurva_016906-49
Syntrophomonas erecta sporosyntropha, Sespor Sespor_003977-49
Syntrophomonas wolfei methylbutyratica, Swm Swm_0147718-62
Terrisporobacter hibernicus, AnGL54 AnGL54_0111320-59
AnGL54_0117111-54
AnGL54_011901-47
AnGL54_0194514-62
AnGL54_033470-48
FD-25-21, AnGL21 AnGL21_018943-47
AnGL21_023642-49
AnGL21_026130-47
Sunxiuqinia elliptica, AnGL22 AnGL22_0064222-66
AnGL22_0064521-66
Paraclostridium benzoelyticum, AnGL27 AnGL27_0052215-62
AnGL27_008200-48
AnGL27_0257919-57
FD-YE-37-9-3, AnGL29 AnGL29_0004916-59
AnGL29_006356-45
AnGL29_0189610-55
AnGL29_0196626-56
Methylobacterium radiotolerans, GTSA1 PaGL#34_051970-48
PaGL#34_060607-55
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0073811-58
PaGL#35_008156-53
PaGL#35_027578-55
PaGL#35_0303017-65
Syntrophomonas erecta, GB-438 Ga0610585_006077-49
Variovorax sp., EBFNA2 PaGL#33_0092615-63
PaGL#33_013135-52
PaGL#33_013783-51
PaGL#33_015613-51
PaGL#33_0233829-71
PaGL#33_037758-56
PaGL#33_0380115-62
PaGL#33_0392112-55
PaGL#33_041853-50
PaGL#33_046814-51
PaGL#33_055103-50
PaGL#33_0575617-57
PaGL#33_058994-51
PaGL#33_059222-49
Variovorax paradoxus, 2u118 PaGL#32_0529912-55
PaGL#32_056222-49
PaGL#32_062707-53
PaGL#32_0210715-62
PaGL#32_021418-55
PaGL#32_036813-50
PaGL#32_040573-50
PaGL#32_047283-50
PaGL#32_047845-53
PaGL#32_0501016-56
PaGL#32_0508519-67
PaGL#32_051094-51
PaGL#32_051292-49
Maridesulfovibrio salexigens, AnGL23 AnGL23_00063257-289
AnGL23_019493-50
AnGL23_020056-52
Exiguobacterium mexicanum, AnGL24 AnGL24_025181-49
Clostridium subterminale, CB-LS10-1 AnGL53_021613-47
Priestia megaterium, 10L1 PaGL#57_026043-49
PaGL#57_027684-50
PaGL#57_0563116-59
PaGL#57_066710-48
PaGL#57_069391-49
Variovorax paradoxus, SPNA7 PaGL#43_056122-49
PaGL#43_062267-53
PaGL#43_0221715-62
PaGL#43_024018-55
PaGL#43_037213-50
PaGL#43_042193-50
PaGL#43_048713-50
PaGL#43_049305-53
PaGL#43_0520816-56
PaGL#43_0528119-67
PaGL#43_053054-51
PaGL#43_053312-49
Methanospirillum lacunae, Ki8-1 MLKi8_0095716-64
MLKi8_023440-49
MLKi8_0294645-87
MLKi8_03095173-214
Geodermatophilus sp., RDM14 PaGL#36_026242-50
Fictibacillus phosphorivorans, TY7 PaGL#38_0388111-53
PaGL#38_041140-47
PaGL#38_0412630-71
Methanospirillum hungatei, GP1 MhGP1_00606183-225
MhGP1_00801178-219
MhGP1_00820174-216
MhGP1_00894127-170
MhGP1_0094715-63
MhGP1_01732162-206
MhGP1_0223044-87
Methanospirillum stamsii, Pt1 MLKi8_01147133-171
MLKi8_0120015-63
MLKi8_01806371-416
MLKi8_02143162-209
MLKi8_027521-44
MLKi8_0280337-86
Syntrophomonas wolfei, saponavida Swsap_026206-49
Bacillus subtilis, 30VD-1 PaGL#66_011703-49
PaGL#66_016844-52
PaGL#66_0237013-56
PaGL#66_035270-48
PaGL#66_036701-49
PaGL#66_037632-50
Peribacillus frigoritolerans, 30N-5 PaGL#67_012240-48
PaGL#67_012840-48
PaGL#67_0184512-56
PaGL#67_027612-50
PaGL#67_037992-45
PaGL#67_045663-50
PaGL#67_045680-48
PaGL#67_0501014-57
Micromonospora inositola, Utrum1 PaGL#61_038040-48
PaGL#61_0434021-69
PaGL#61_058781-45
Sphingomonas sp., CR2A3 PaGL#62_006293-50
PaGL#62_016380-30
PaGL#62_036937-53
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001770-48
AnGL54_0184120-59
AnGL54_0189911-54
AnGL54_019181-47
AnGL54_0274814-62
Niallia taxi, AG-1 PaGL#37_041140-48
PaGL#37_002348-55
PaGL#37_0439114-62
PaGL#37_005270-45
PaGL#37_0489717-58
PaGL#37_0104425-56
PaGL#37_021660-47
PaGL#37_029744-50
PaGL#37_0362919-64
Methanospirillum.hungatei GP1, MhGP1 8064047316:MhGP1_0067344-87
8064047822:MhGP1_01171162-206
8064048628:MhGP1_0195515-63
8064048681:MhGP1_02008127-170
8064048756:MhGP1_02082174-216
8064048775:MhGP1_02101178-219
8064048973:MhGP1_02296183-225
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1136:Mhun_0003615-63
Ga0065338_11400:Mhun_00398168-208
Ga0065338_111194:Mhun_01194174-212
Ga0065338_111420:Mhun_01420370-416
Ga0065338_111971:Mhun_0197242-87
Ga0065338_113180:Mhun_03177185-227
Ga0065338_113449:Mhun_03445134-172
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10866:Spalm_013506-50
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111336:Swol_013055-49
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12944:Szehn_017619-49
Syntrophus aciditrophicus, SB 637860982:SYN_0248911-57
Syntrophus gentianae, DSM8423 Sgen_02985267-308
Mucilaginibacter gossypii, cycad 4 PaGL#42_0104113-57
PaGL#42_012864-52
PaGL#42_016414-52
PaGL#42_027778-56
PaGL#42_0522011-58
PaGL#42_05699327-352
Ruminococcus callidus, ATCC 27760 Rcal_010133-45
Rcal_0295013-57

PF00294:PfkB. pfkB family carbohydrate kinase

Found 307 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512676.1:LOMAGDGF_018891-308
WP_003513950.1:LOMAGDGF_0270711-280
Clostridium acetobutylicum, DSM 1731 WP_010963555.1:FHOCHPCF_0026121-292
WP_010963717.1:FHOCHPCF_0043822-305
WP_010963746.1:FHOCHPCF_004690-309
WP_010965972.1:FHOCHPCF_027361-299
WP_010966234.1:FHOCHPCF_0299816-282
WP_010966764.1:FHOCHPCF_0354913-255
Acetivibrio alkalicellulosi, DSM 17461 2510060237:NJMEOJLD_0048913-289
2510062700:NJMEOJLD_0289725-292
2510062921:NJMEOJLD_031072-310
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947139.1:NEIHKHHH_021492-310
WP_036946015.1:NEIHKHHH_0323543-286
WP_201782020.1:NEIHKHHH_033410-310
WP_036944645.1:NEIHKHHH_0354332-293
WP_036936755.1:NEIHKHHH_0386213-283
Ruminococcus albus_7, DSM 20455 WP_013496939.1:HCIAFFOI_001973-314
WP_013497394.1:HCIAFFOI_006824-313
WP_013497757.1:HCIAFFOI_010968-288
WP_013497776.1:HCIAFFOI_01115198-281
WP_013498817.1:HCIAFFOI_022418-203
WP_013498824.1:HCIAFFOI_022480-315
WP_242843387.1:HCIAFFOI_0240712-257
Paenibacillus guangzhouensis, KCTC 33171 WP_152391808.1:KDFAKKPF_0021516-317
WP_152391815.1:KDFAKKPF_002226-292
WP_152391918.1:KDFAKKPF_003388-298
WP_152392035.1:KDFAKKPF_004670-298
WP_227793230.1:KDFAKKPF_033511-292
WP_152395234.1:KDFAKKPF_041650-308
WP_152396264.1:KDFAKKPF_054208-304
WP_152396800.1:KDFAKKPF_0605826-308
Clostridium acetobutylicum, ATCC 824 WP_010963555.1:OJAMHIDJ_0026121-292
WP_010963717.1:OJAMHIDJ_0043922-305
WP_010963746.1:OJAMHIDJ_004690-309
WP_010965972.1:OJAMHIDJ_027441-299
WP_010966234.1:OJAMHIDJ_0300716-282
WP_010966764.1:OJAMHIDJ_0356113-255
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697702.1:PROKKA_004270-311
WP_137697599.1:PROKKA_0066014-282
WP_137696713.1:PROKKA_0273138-281
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0060775-156
FD_25_22, AnGL7 AnGL7_0036110-303
AnGL7_0056613-295
AnGL7_007890-296
AnGL7_0240788-294
AnGL7_025434-302
AnGL7_025564-303
AnGL7_033440-293
AnGL7_0356926-294
AnGL7_035782-285
FD_25_27, AnGL8 AnGL8_011200-303
AnGL8_001582-303
AnGL8_001793-294
AnGL8_0154511-302
AnGL8_018700-295
AnGL8_0187686-289
AnGL8_0106144-319
AnGL8_010666-309
AnGL8_025252-285
FD_MS_7_1, AnGL28 AnGL28_0071729-271
AnGL28_0129615-347
AnGL28_016172-256
AnGL28_019932-219
AnGL28_0199821-291
AnGL28_0220117-325
AnGL28_0271941-331
AnGL28_0308720-288
FD_SO4_25_1_F22, AnGL30 AnGL30_0008911-344
AnGL30_0088549-312
AnGL30_010368-299
AnGL30_0140622-289
AnGL30_0176521-282
AnGL30_0176622-282
AnGL30_018112-205
259-320
FD_SO4_37_1, AnGL2 AnGL2_0042615-347
AnGL2_007462-256
AnGL2_011222-219
AnGL2_0112721-291
AnGL2_0133017-325
AnGL2_0184841-331
AnGL2_0221620-288
AnGL2_0339629-271
FD_YE_25_21, AnGL21 AnGL21_040582-285
AnGL21_041320-295
AnGL21_042520-295
AnGL21_0357621-296
AnGL21_00983147-294
AnGL21_0111426-294
AnGL21_0200059-347
AnGL21_0204216-309
AnGL21_026212-285
AnGL21_0270612-302
AnGL21_031590-306
AnGL21_033530-297
AnGL21_034244-304
FD_YE_37_3, AnGL26 AnGL26_0109316-314
AnGL26_0177123-284
AnGL26_0253155-316
AnGL26_03607144-334
AnGL26_036122-322
AnGL26_039950-295
AnGL26_041070-280
FD_YE_37_8_2, AnGL3 AnGL3_0027018-279
AnGL3_007603-317
AnGL3_00763144-333
AnGL3_010486-292
AnGL3_0211954-309
AnGL3_0227119-285
FD_YE_37_9_2, AnGL4 AnGL4_003100-283
AnGL4_003121-285
AnGL4_004850-305
AnGL4_008216-294
AnGL4_014437-288
AnGL4_028565-303
AnGL4_032640-312
Syntrophus buswellii, Sbus Sbus_0018619-295
Sbus_0044220-322
Sbus_0182234-296
Syntrophomonas curvata, Scurva Scurva_0169060-137
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0039775-156
Syntrophomonas wolfei methylbutyratica, Swm Swm_0147773-332
Terrisporobacter hibernicus, AnGL54 AnGL54_044406-284
AnGL54_0405110-287
AnGL54_0119057-348
AnGL54_017053-308
AnGL54_022700-293
AnGL54_023057-294
AnGL54_036645-291
FD-25-21, AnGL21 AnGL21_001054-303
AnGL21_001194-302
AnGL21_0026189-294
AnGL21_018110-296
AnGL21_0203813-295
AnGL21_0227210-303
AnGL21_0270426-294
AnGL21_0291311-304
Sunxiuqinia elliptica, AnGL22 AnGL22_0109516-314
AnGL22_0176823-284
AnGL22_0252855-316
AnGL22_03602144-334
AnGL22_036072-322
AnGL22_039910-295
AnGL22_041030-280
Paraclostridium benzoelyticum, AnGL27 AnGL27_0052271-361
AnGL27_005387-296
AnGL27_018057-282
AnGL27_019007-288
AnGL27_021870-293
AnGL27_025760-301
FD-MS-7-8, AnGL9 AnGL9_0013920-288
AnGL9_0017634-271
AnGL9_0172118-325
AnGL9_0214420-285
AnGL9_0225315-347
AnGL9_0242032-330
FD-YE-37-9-3, AnGL29 AnGL29_001145-303
AnGL29_005220-312
AnGL29_010350-283
AnGL29_010371-285
AnGL29_012100-305
AnGL29_015466-294
AnGL29_021687-288
Methylobacterium radiotolerans, GTSA1 PaGL#34_019381-295
PaGL#34_0385855-323
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00064117-275
PaGL#35_0128618-279
PaGL#35_013643-278
PaGL#35_0445533-323
PaGL#35_0471114-335
PaGL#35_0492816-313
PaGL#35_049633-294
PaGL#35_0505358-354
PaGL#35_0529926-286
Syntrophomonas erecta, GB-438 Ga0610585_0060775-156
Variovorax sp., EBFNA2 PaGL#33_0087435-290
PaGL#33_010272-301
PaGL#33_022617-308
PaGL#33_0526712-302
Variovorax paradoxus, 2u118 PaGL#32_0089235-290
PaGL#32_063796-291
PaGL#32_010682-301
PaGL#32_035127-308
PaGL#32_0459715-305
Dietzia cinnamea, 55 PaGL#56_0120829-295
PaGL#56_023685-292
PaGL#56_0315222-303
Maridesulfovibrio salexigens, AnGL23 AnGL23_006715-296
AnGL23_0072138-291
AnGL23_02679195-493
AnGL23_0274220-287
AnGL23_0325314-314
Exiguobacterium mexicanum, AnGL24 AnGL24_007190-293
AnGL24_0148514-284
AnGL24_015150-301
AnGL24_025322-314
Clostridium subterminale, CB-LS10-1 AnGL53_0216158-348
Priestia megaterium, 10L1 PaGL#57_0161230-285
PaGL#57_0403013-317
PaGL#57_045034-303
PaGL#57_0505210-137
168-264
PaGL#57_053386-281
PaGL#57_0538420-318
PaGL#57_062810-312
PaGL#57_065060-284
PaGL#57_0694815-317
Variovorax paradoxus, SPNA7 PaGL#43_063269-294
PaGL#43_0088335-290
PaGL#43_010652-301
PaGL#43_035517-308
PaGL#43_047340-289
Methanospirillum lacunae, Ki8-1 MLKi8_015161-274
Geodermatophilus sp., RDM14 PaGL#36_004688-299
PaGL#36_014484-291
PaGL#36_0191028-295
PaGL#36_029075-291
PaGL#36_031831-323
PaGL#36_041012-290
PaGL#36_0411731-309
Methylorubrum populi, CTY4 PaGL#39_010827-297
PaGL#39_0457355-322
Fictibacillus phosphorivorans, TY7 PaGL#38_008667-281
PaGL#38_047133-305
Methanospirillum hungatei, GP1 MhGP1_016881-276
Methanospirillum stamsii, Pt1 MLKi8_020811-276
Syntrophomonas wolfei, saponavida Swsap_0262061-268
Bacillus subtilis, 30VD-1 PaGL#66_0032511-313
PaGL#66_007130-284
PaGL#66_010527-263
PaGL#66_016734-315
PaGL#66_020864-303
PaGL#66_026948-283
PaGL#66_035673-312
Peribacillus frigoritolerans, 30N-5 PaGL#67_003251-284
PaGL#67_009604-303
PaGL#67_0113413-264
PaGL#67_011487-314
PaGL#67_012764-303
PaGL#67_0251711-264
PaGL#67_027118-284
PaGL#67_029145-291
PaGL#67_029226-301
PaGL#67_033272-317
PaGL#67_035510-295
PaGL#67_0378712-110
172-259
PaGL#67_0480112-313
PaGL#67_052721-299
PaGL#67_052790-310
Micromonospora inositola, Utrum1 PaGL#61_006591-100
326-408
PaGL#61_015263-286
PaGL#61_018705-295
PaGL#61_021021-299
PaGL#61_021894-294
PaGL#61_023574-296
PaGL#61_0325631-331
PaGL#61_0362413-345
PaGL#61_0404118-297
PaGL#61_040792-294
PaGL#61_043106-294
PaGL#61_043581-299
PaGL#61_051101-300
PaGL#61_0542529-295
PaGL#61_055242-280
Sphingomonas sp., CR2A3 PaGL#62_000402-308
PaGL#62_0155912-292
PaGL#62_0336055-319
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_004945-291
AnGL54_0088010-287
AnGL54_012696-284
AnGL54_0191857-348
AnGL54_025093-308
AnGL54_030730-293
AnGL54_031087-294
Niallia taxi, AG-1 PaGL#37_041052-281
PaGL#37_0426011-306
PaGL#37_0436121-257
PaGL#37_0436811-264
PaGL#37_004420-301
PaGL#37_0052757-350
PaGL#37_0102412-312
PaGL#37_0106316-265
PaGL#37_0516811-267
PaGL#37_022236-287
PaGL#37_022670-315
PaGL#37_032899-299
Methanospirillum.hungatei GP1, MhGP1 8064047866:MhGP1_012151-276
Methanospirillum.hungatei.JF-1, MhunJF1 Mhun_009121-276
MPOB, Sfum 639701562:Sfum_0083040-292
639704158:Sfum_034711-282
Sfum_0372338-322
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10866:Spalm_0135061-151
Syntrophus aciditrophicus, SB 637860273:SYN_0184111-291
Syntrophus gentianae, DSM8423 Ga0074853_102105:Sgen_0031620-322
Ga0074853_10781:Sgen_0124132-296
Mucilaginibacter gossypii, cycad 4 PaGL#42_0090618-314
PaGL#42_0172310-319
PaGL#42_0364822-298
PaGL#42_0403618-279
PaGL#42_04459143-276
PaGL#42_0574927-287
Ruminococcus callidus, ATCC 27760 Rcal_0179923-265
Rcal_019519-312
Rcal_021358-285
Rcal_021735-308
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