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Spalm_00983 Locus tags: • Sequence Length: 252

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200250250300300
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Spalm_01532 unknown Spalm_01669 Spalm_00405 Spalm_01533 Spalm_00983 Spalm_00806 Spalm_01534 Spalm_00807 Spalm_01125 Spalm_01396 
    [PF04851]_[PF17757]

    [12:PF04851]_[157:PF17757]

    [1:IPR027417]_[7:IPR014001]_[12:IPR006935]_[24:IPR014001]_[157:IPR041471]

Looking for similar signatures in the working genomes

PF04851:ResIII. Type III restriction enzyme, res subunit

Found 274 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_235715231.1:LOMAGDGF_00494126-329
WP_003517639.1:LOMAGDGF_01726272-438
WP_003512502.1:LOMAGDGF_0198014-137
WP_003516864.1:LOMAGDGF_0291412-246
Clostridium acetobutylicum, DSM 1731 WP_010963824.1:FHOCHPCF_0054710-132
WP_010965028.1:FHOCHPCF_01764196-358
WP_010966109.1:FHOCHPCF_02870213-360
Acetivibrio alkalicellulosi, DSM 17461 2510059932:NJMEOJLD_001941334-1529
2510061833:NJMEOJLD_02047273-438
2510061920:NJMEOJLD_0213070-252
2510062431:NJMEOJLD_0262914-137
2510063619:NJMEOJLD_03798142-289
2510063850:NJMEOJLD_0402510-244
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939381.1:NEIHKHHH_00080101-245
WP_036941718.1:NEIHKHHH_0236714-137
WP_028308439.1:NEIHKHHH_03040256-425
WP_242857075.1:NEIHKHHH_030931610-1806
WP_050753491.1:NEIHKHHH_03096473-588
WP_036939180.1:NEIHKHHH_03450277-441
WP_036935401.1:NEIHKHHH_04874123-291
WP_050753892.1:NEIHKHHH_05525165-297
NEIHKHHH_055281610-1806
Ruminococcus albus_7, DSM 20455 WP_013483605.1:HCIAFFOI_037294-141
WP_013483606.1:HCIAFFOI_037302-141
WP_013483871.1:HCIAFFOI_04023375-558
WP_013497191.1:HCIAFFOI_0046810-138
WP_028504272.1:HCIAFFOI_011347-272
WP_013497898.1:HCIAFFOI_01251243-391
WP_013498472.1:HCIAFFOI_01871273-406
WP_028504190.1:HCIAFFOI_01965145-292
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11275:GJLLLGJL_0026514-117
Ga0065332_11498:GJLLLGJL_00486197-358
GJLLLGJL_00526341-499
Ga0065332_111042:GJLLLGJL_01026146-293
Ga0065332_111190:GJLLLGJL_0116525-245
Ga0065332_111555:GJLLLGJL_015247-178
Ga0065332_111652:GJLLLGJL_0162084-256
Ga0065332_112688:GJLLLGJL_02639256-432
Paenibacillus guangzhouensis, KCTC 33171 WP_152392301.1:KDFAKKPF_00774186-341
WP_152393919.1:KDFAKKPF_02634260-476
WP_152395487.1:KDFAKKPF_0450417-145
WP_152396362.1:KDFAKKPF_05535339-495
Clostridium acetobutylicum, ATCC 824 WP_010963824.1:OJAMHIDJ_0054810-132
WP_010965028.1:OJAMHIDJ_01771196-358
WP_010966109.1:OJAMHIDJ_02879213-360
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697515.1:PROKKA_0056416-149
WP_137698203.1:PROKKA_0111177-254
WP_137696609.1:PROKKA_0137413-137
WP_137696600.1:PROKKA_0138415-169
WP_137699218.1:PROKKA_02266243-420
WP_137698665.1:PROKKA_02321282-445
WP_137696769.1:PROKKA_02793208-355
WP_137699172.1:PROKKA_0337931-170
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00634257-421
OINOEOOJ_008014-209
OINOEOOJ_00904297-391
OINOEOOJ_01393104-269
OINOEOOJ_020099-137
FD_25_22, AnGL7 AnGL7_0368035-81
AnGL7_036834-154
AnGL7_00253409-553
AnGL7_010761-154
AnGL7_01144136-325
AnGL7_01817318-474
AnGL7_01820222-370
AnGL7_0227221-239
AnGL7_0271614-87
FD_25_27, AnGL8 AnGL8_01809217-366
AnGL8_0194911-138
AnGL8_02099370-518
AnGL8_0227124-241
AnGL8_02452205-281
FD_MS_7_1, AnGL28 AnGL28_00716192-357
AnGL28_0127411-139
FD_SO4_25_1_F22, AnGL30 AnGL30_001349-138
AnGL30_01628321-477
AnGL30_0206685-275
FD_SO4_37_1, AnGL2 AnGL2_0040411-139
AnGL2_03395192-357
FD_YE_25_21, AnGL21 AnGL21_0083518-235
AnGL21_01043163-352
AnGL21_011961-154
AnGL21_0213015-92
FD_YE_37_3, AnGL26 AnGL26_00954161-353
AnGL26_0100012-117
AnGL26_01094292-460
FD_YE_37_8_2, AnGL3 AnGL3_003169-85
AnGL3_00531365-530
AnGL3_0072110-243
AnGL3_009060-248
FD_YE_37_9_2, AnGL4 AnGL4_00765343-500
AnGL4_024279-138
AnGL4_03305214-376
Syntrophus buswellii, Sbus Sbus_0002448-231
Sbus_0017721-190
Sbus_00780158-321
Sbus_011389-138
Sbus_02190430-572
Sbus_02452138-413
Syntrophomonas curvata, Scurva Scurva_0032214-137
Scurva_003494-209
Scurva_01726274-418
Scurva_01913334-491
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00106297-391
Sespor_00370257-421
Sespor_015639-137
Sespor_0165347-216
Sespor_02245104-269
Syntrophomonas wolfei methylbutyratica, Swm Swm_0024014-137
Swm_00321108-279
Swm_00562341-499
Swm_0067424-192
Swm_01138146-293
Swm_01202259-414
Swm_0132925-244
Swm_0182184-256
Swm_0273584-248
Terrisporobacter hibernicus, AnGL54 AnGL54_02153302-465
AnGL54_02571192-341
AnGL54_02579202-396
AnGL54_029419-119
FD-25-21, AnGL21 AnGL21_00711217-365
AnGL21_00714318-474
AnGL21_007671-102
AnGL21_01426300-465
AnGL21_014801-154
AnGL21_0169715-167
AnGL21_0350314-87
Sunxiuqinia elliptica, AnGL22 AnGL22_00955161-353
AnGL22_0100112-117
AnGL22_01096292-460
Paraclostridium benzoelyticum, AnGL27 AnGL27_009029-136
AnGL27_01496334-486
AnGL27_01764198-393
AnGL27_02012314-471
AnGL27_03246270-437
FD-MS-7-8, AnGL9 AnGL9_00178451-614
AnGL9_002091-154
AnGL9_0203211-139
FD-YE-37-9-3, AnGL29 AnGL29_00563214-376
AnGL29_01490343-500
AnGL29_031529-138
Methylobacterium radiotolerans, GTSA1 PaGL#34_00979191-315
PaGL#34_0110514-172
PaGL#34_017911-165
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_008704-114
PaGL#35_00950120-292
PaGL#35_043245-151
PaGL#35_0612113-134
Syntrophomonas erecta, GB-438 Ga0610585_00634257-421
Ga0610585_008014-209
Ga0610585_00904297-391
Ga0610585_01393104-269
Ga0610585_020099-137
Variovorax sp., EBFNA2 PaGL#33_0376966-150
PaGL#33_05013155-320
Variovorax paradoxus, 2u118 PaGL#32_0214766-150
PaGL#32_02254421-564
PaGL#32_04535162-348
Dietzia cinnamea, 55 PaGL#56_03429325-517
PaGL#56_00815182-328
PaGL#56_0136254-179
PaGL#56_0148226-179
Maridesulfovibrio salexigens, AnGL23 AnGL23_00938101-239
AnGL23_0146512-138
AnGL23_01498241-409
AnGL23_02207100-238
Exiguobacterium mexicanum, AnGL24 AnGL24_00104220-372
AnGL24_00943194-343
AnGL24_0217815-122
AnGL24_0223073-148
Clostridium subterminale, CB-LS10-1 AnGL53_00578241-392
AnGL53_0101637-263
AnGL53_031469-137
Priestia megaterium, 10L1 PaGL#57_02431152-300
PaGL#57_0246713-130
PaGL#57_01700284-445
PaGL#57_06055252-466
Variovorax paradoxus, SPNA7 PaGL#43_0240766-150
PaGL#43_02880421-564
PaGL#43_0497591-337
Methanospirillum lacunae, Ki8-1 MLKi8_00675315-469
MLKi8_02026154-342
MLKi8_029579-96
Geodermatophilus sp., RDM14 PaGL#36_0070318-171
PaGL#36_00711180-326
PaGL#36_0284019-128
PaGL#36_03040151-305
Methylorubrum populi, CTY4 PaGL#39_025291-160
PaGL#39_034353-148
PaGL#39_03930202-326
Fictibacillus phosphorivorans, TY7 PaGL#38_00802192-340
PaGL#38_02226263-428
PaGL#38_0405714-141
PaGL#38_04184158-308
Methanospirillum hungatei, GP1 MhGP1_021350-131
MhGP1_0260591-334
MhGP1_0290810-107
MhGP1_02994159-346
Methanospirillum stamsii, Pt1 MLKi8_01121303-457
MLKi8_01816138-354
MLKi8_02683189-347
MLKi8_0350410-108
Syntrophomonas wolfei, saponavida Swsap_0137313-117
Swsap_02261259-401
Swsap_02780458-615
Bacillus subtilis, 30VD-1 PaGL#66_00369293-444
PaGL#66_00756119-268
PaGL#66_0078711-138
PaGL#66_02058257-470
PaGL#66_02558266-431
Peribacillus frigoritolerans, 30N-5 PaGL#67_00531122-270
PaGL#67_0056612-138
PaGL#67_01498195-341
PaGL#67_02429254-486
PaGL#67_04031264-429
PaGL#67_05330161-318
Micromonospora inositola, Utrum1 PaGL#61_00691187-332
PaGL#61_0187413-166
PaGL#61_04848224-275
PaGL#61_0522833-151
Sphingomonas sp., CR2A3 PaGL#62_0307945-169
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02956302-465
AnGL54_03375192-341
AnGL54_03383202-396
AnGL54_037449-119
Niallia taxi, AG-1 PaGL#37_02489256-480
PaGL#37_0341612-119
PaGL#37_03491152-299
Methanospirillum.hungatei GP1, MhGP1 8064046925:MhGP1_0029891-334
8064047412:MhGP1_007680-131
8064049845:MhGP1_03152159-346
8064049934:MhGP1_0323810-107
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112091:Mhun_020909-91
MPOB, Sfum 639701563:Sfum_0083114-138
639702207:Sfum_01487374-523
639703448:Sfum_0275717-232
639703629:Sfum_02934129-373
639704043:Sfum_03353487-629
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1127:Spalm_01790107-279
Ga0128340_1238:Spalm_02633177-328
Ga0128340_10830:Spalm_01314259-421
Ga0128340_105106:Spalm_0098312-137
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11275:Swol_0026514-117
Ga0065332_11498:Swol_00486197-358
Swol_00526341-499
Ga0065332_111042:Swol_01026146-293
Ga0065332_111190:Swol_0116525-245
Ga0065332_111555:Swol_015247-178
Ga0065332_111652:Swol_0162084-256
Ga0065332_112688:Swol_02639256-432
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1513:Szehn_02620334-491
Ga0124040_1416:Szehn_02345262-424
Ga0124040_10112:Szehn_00012103-269
Szehn_0237814-137
Ga0124040_12856:Szehn_01715129-296
Ga0124040_12971:Szehn_01788258-391
Syntrophus aciditrophicus, SB 637859583:SYN_01182263-430
637859978:SYN_015604-260
637860719:SYN_022588-138
Syntrophus gentianae, DSM8423 Ga0074853_1212:Sgen_02442151-373
Ga0074853_10722:Sgen_011868-138
Ga0074853_11130:Sgen_01688264-430
Sgen_02214446-602
Sgen_0199195-278
Ga0074853_102164:Sgen_00372188-341
Mucilaginibacter gossypii, cycad 4 PaGL#42_04593319-475
PaGL#42_055759-134
Ruminococcus callidus, ATCC 27760 Rcal_0031479-212
Rcal_0116513-138
Rcal_017439-272
Rcal_0198460-194
Rcal_02306667-870
Rcal_0289922-191

PF17757:UvrB_inter. UvrB interaction domain

Found 123 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515443.1:LOMAGDGF_00225145-233
WP_003512502.1:LOMAGDGF_01980157-248
Clostridium acetobutylicum, DSM 1731 WP_010963824.1:FHOCHPCF_00547157-248
WP_010966492.1:FHOCHPCF_03269140-228
Acetivibrio alkalicellulosi, DSM 17461 2510060693:NJMEOJLD_00936145-233
2510062431:NJMEOJLD_02629157-248
Pseudobacteroides cellulosolvens, DSM 2933 WP_036941718.1:NEIHKHHH_02367157-248
WP_036942655.1:NEIHKHHH_02628137-226
Ruminococcus albus_7, DSM 20455 WP_013499702.1:HCIAFFOI_03222139-224
WP_013497191.1:HCIAFFOI_00468157-248
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00086131-220
Ga0065332_11275:GJLLLGJL_00265157-248
Paenibacillus guangzhouensis, KCTC 33171 WP_152395487.1:KDFAKKPF_04504164-255
WP_152395775.1:KDFAKKPF_04856140-228
Clostridium acetobutylicum, ATCC 824 WP_010963824.1:OJAMHIDJ_00548157-248
WP_010966492.1:OJAMHIDJ_03278140-228
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697774.1:PROKKA_00513138-226
WP_137696609.1:PROKKA_01374157-248
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02009157-248
OINOEOOJ_02133130-219
FD_25_22, AnGL7 AnGL7_01667133-221
AnGL7_02716158-249
FD_25_27, AnGL8 AnGL8_00711131-219
AnGL8_01949158-249
FD_MS_7_1, AnGL28 AnGL28_01263134-216
AnGL28_01274160-249
FD_SO4_25_1_F22, AnGL30 AnGL30_00134159-248
AnGL30_00532147-234
FD_SO4_37_1, AnGL2 AnGL2_00393134-216
AnGL2_00404160-249
FD_YE_25_21, AnGL21 AnGL21_01930131-220
AnGL21_02130158-250
FD_YE_37_3, AnGL26 AnGL26_01000159-247
AnGL26_01662121-206
FD_YE_37_8_2, AnGL3 AnGL3_00316157-247
AnGL3_01290141-228
FD_YE_37_9_2, AnGL4 AnGL4_00814139-228
AnGL4_02427157-248
Syntrophus buswellii, Sbus Sbus_01138157-248
Sbus_01988127-213
Syntrophomonas curvata, Scurva Scurva_00164151-240
Scurva_00322157-248
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01439130-219
Sespor_01563157-248
Syntrophomonas wolfei methylbutyratica, Swm Swm_00084131-220
Swm_00240157-248
Terrisporobacter hibernicus, AnGL54 AnGL54_02941156-247
AnGL54_03379140-229
FD-25-21, AnGL21 AnGL21_00915132-221
AnGL21_03503158-249
Sunxiuqinia elliptica, AnGL22 AnGL22_01001159-247
AnGL22_01659121-206
Paraclostridium benzoelyticum, AnGL27 AnGL27_00843142-229
AnGL27_00902156-247
FD-MS-7-8, AnGL9 AnGL9_02021138-220
AnGL9_02032160-249
FD-YE-37-9-3, AnGL29 AnGL29_01539139-228
AnGL29_03152157-248
Methylobacterium radiotolerans, GTSA1 PaGL#34_00979336-425
PaGL#34_01920168-251
PaGL#34_04832127-216
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00501149-236
PaGL#35_06121158-247
Syntrophomonas erecta, GB-438 Ga0610585_02009157-248
Ga0610585_02133130-219
Variovorax sp., EBFNA2 PaGL#33_02819127-216
PaGL#33_03769189-277
Variovorax paradoxus, 2u118 PaGL#32_02147188-277
PaGL#32_03004127-216
Dietzia cinnamea, 55 PaGL#56_01362199-289
PaGL#56_02144147-237
Maridesulfovibrio salexigens, AnGL23 AnGL23_01318136-223
AnGL23_01465159-249
Exiguobacterium mexicanum, AnGL24 AnGL24_02178161-252
AnGL24_03029141-229
Clostridium subterminale, CB-LS10-1 AnGL53_03146157-248
AnGL53_03438141-228
Priestia megaterium, 10L1 PaGL#57_02188140-228
PaGL#57_02467158-249
Variovorax paradoxus, SPNA7 PaGL#43_02407188-277
PaGL#43_03057127-216
Methanospirillum lacunae, Ki8-1 MLKi8_02957158-247
Geodermatophilus sp., RDM14 PaGL#36_00834157-235
PaGL#36_02840167-257
Methylorubrum populi, CTY4 PaGL#39_01186109-198
PaGL#39_03930347-436
PaGL#39_04053169-253
Fictibacillus phosphorivorans, TY7 PaGL#38_00442139-228
PaGL#38_04057160-251
Methanospirillum hungatei, GP1 MhGP1_02908158-247
Methanospirillum stamsii, Pt1 MLKi8_03504158-247
Syntrophomonas wolfei, saponavida Swsap_01260174-263
Swsap_01373156-247
Bacillus subtilis, 30VD-1 PaGL#66_00129141-228
PaGL#66_00787158-249
Peribacillus frigoritolerans, 30N-5 PaGL#67_00210140-227
PaGL#67_00566158-249
Micromonospora inositola, Utrum1 PaGL#61_01078156-238
PaGL#61_05228181-270
Sphingomonas sp., CR2A3 PaGL#62_00316128-215
PaGL#62_03079189-279
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00209140-229
AnGL54_03744156-247
Niallia taxi, AG-1 PaGL#37_00063141-230
PaGL#37_03416158-249
Methanospirillum.hungatei GP1, MhGP1 8064049934:MhGP1_03238158-247
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112091:Mhun_02090158-247
MPOB, Sfum 639701563:Sfum_00831157-248
Sfum_03560166-251
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01514130-219
Ga0128340_105106:Spalm_00983157-235
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00086131-220
Ga0065332_11275:Swol_00265157-248
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00440130-219
Szehn_02378157-248
Syntrophus aciditrophicus, SB 637859216:SYN_00846126-213
637860719:SYN_02258157-248
Syntrophus gentianae, DSM8423 Ga0074853_10722:Sgen_01186157-248
Ga0074853_11724:Sgen_02193126-212
Mucilaginibacter gossypii, cycad 4 PaGL#42_04657154-241
PaGL#42_05575158-247
Ruminococcus callidus, ATCC 27760 Rcal_00358140-227
Rcal_01165157-248
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