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Swol_02445 Locus tags: • Sequence Length: 288

Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Gs0120309

5050100100150150200200250250300300
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Swol_02441 Swol_02442 Swol_02443 Swol_02445 Swol_02447 Swol_02448 Swol_02450 
    [PF00181]_[PF03947]

    [41:PF00181]_[124:PF03947]

    [2:IPR012340]_[41:IPR002171]_[41:IPR022666]_[123:IPR022669]_[124:IPR022669]_[126:IPR008991]

Looking for similar signatures in the working genomes

PF00181:Ribosomal_L2. Ribosomal Proteins L2, RNA binding domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518557.1:LOMAGDGF_0046541-118
Clostridium acetobutylicum, DSM 1731 WP_010966409.1:FHOCHPCF_0317541-118
Acetivibrio alkalicellulosi, DSM 17461 2510061241:NJMEOJLD_0147141-118
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945073.1:NEIHKHHH_0256541-118
Ruminococcus albus_7, DSM 20455 WP_013496803.1:HCIAFFOI_0004041-116
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112490:GJLLLGJL_0244541-118
Paenibacillus guangzhouensis, KCTC 33171 WP_152395415.1:KDFAKKPF_0440941-118
Clostridium acetobutylicum, ATCC 824 WP_010966409.1:OJAMHIDJ_0318441-118
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697963.1:PROKKA_0071941-118
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0239041-118
FD_25_22, AnGL7 AnGL7_0354041-117
FD_25_27, AnGL8 AnGL8_0127841-118
FD_MS_7_1, AnGL28 AnGL28_0286241-118
FD_SO4_25_1_F22, AnGL30 AnGL30_0094741-117
FD_SO4_37_1, AnGL2 AnGL2_0199141-118
FD_YE_25_21, AnGL21 AnGL21_0286741-117
FD_YE_37_3, AnGL26 AnGL26_0112841-117
FD_YE_37_8_2, AnGL3 AnGL3_0142441-115
FD_YE_37_9_2, AnGL4 AnGL4_0236841-117
Syntrophus buswellii, Sbus Sbus_0047541-117
Syntrophomonas curvata, Scurva Scurva_0280441-118
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0112741-118
Syntrophomonas wolfei methylbutyratica, Swm Swm_0282841-118
Terrisporobacter hibernicus, AnGL54 AnGL54_0328541-117
FD-25-21, AnGL21 AnGL21_0273241-117
Sunxiuqinia elliptica, AnGL22 AnGL22_0113041-117
Paraclostridium benzoelyticum, AnGL27 AnGL27_0075241-117
FD-MS-7-8, AnGL9 AnGL9_0305241-118
FD-YE-37-9-3, AnGL29 AnGL29_0309341-117
Methylobacterium radiotolerans, GTSA1 PaGL#34_0247541-118
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0589542-119
Syntrophomonas erecta, GB-438 Ga0610585_0239041-118
Variovorax sp., EBFNA2 PaGL#33_0560641-117
Variovorax paradoxus, 2u118 PaGL#32_0489241-117
Dietzia cinnamea, 55 PaGL#56_0234241-119
Maridesulfovibrio salexigens, AnGL23 AnGL23_0203941-117
Exiguobacterium mexicanum, AnGL24 AnGL24_0297041-118
Clostridium subterminale, CB-LS10-1 AnGL53_0334741-118
Priestia megaterium, 10L1 PaGL#57_0212441-117
Variovorax paradoxus, SPNA7 PaGL#43_0507941-117
Methanospirillum lacunae, Ki8-1 MLKi8_0044110-80
Geodermatophilus sp., RDM14 PaGL#36_0378541-118
Methylorubrum populi, CTY4 PaGL#39_0190941-118
Fictibacillus phosphorivorans, TY7 PaGL#38_0052541-118
Methanospirillum hungatei, GP1 MhGP1_0066110-80
Methanospirillum stamsii, Pt1 MLKi8_0091010-79
Syntrophomonas wolfei, saponavida Swsap_0096141-118
Bacillus subtilis, 30VD-1 PaGL#66_0004941-117
Peribacillus frigoritolerans, 30N-5 PaGL#67_0013341-117
Micromonospora inositola, Utrum1 PaGL#61_0641241-119
Sphingomonas sp., CR2A3 PaGL#62_0348641-122
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0012141-117
Niallia taxi, AG-1 PaGL#37_0014241-117
Methanospirillum.hungatei GP1, MhGP1 8064048918:MhGP1_0224110-80
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113238:Mhun_0323510-80
MPOB, Sfum 639702325:Sfum_0160741-117
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1264:Spalm_0269441-118
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112490:Swol_0244541-118
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118127:Szehn_0028741-118
Syntrophus aciditrophicus, SB 637858612:SYN_0028441-118
Syntrophus gentianae, DSM8423 Ga0074853_10272:Sgen_0028341-117
Mucilaginibacter gossypii, cycad 4 PaGL#42_0587042-118
Ruminococcus callidus, ATCC 27760 Rcal_0012441-116

PF03947:Ribosomal_L2_C. Ribosomal Proteins L2, C-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518557.1:LOMAGDGF_00465124-251
Clostridium acetobutylicum, DSM 1731 WP_010966409.1:FHOCHPCF_03175124-251
Acetivibrio alkalicellulosi, DSM 17461 2510061241:NJMEOJLD_01471124-251
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945073.1:NEIHKHHH_02565124-251
Ruminococcus albus_7, DSM 20455 WP_013496803.1:HCIAFFOI_00040124-251
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112490:GJLLLGJL_02445124-251
Paenibacillus guangzhouensis, KCTC 33171 WP_152395415.1:KDFAKKPF_04409124-251
Clostridium acetobutylicum, ATCC 824 WP_010966409.1:OJAMHIDJ_03184124-251
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697963.1:PROKKA_00719124-251
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02390124-251
FD_25_22, AnGL7 AnGL7_03540124-250
FD_25_27, AnGL8 AnGL8_01278124-250
FD_MS_7_1, AnGL28 AnGL28_02862125-250
FD_SO4_25_1_F22, AnGL30 AnGL30_00947125-249
FD_SO4_37_1, AnGL2 AnGL2_01991125-250
FD_YE_25_21, AnGL21 AnGL21_02867124-250
FD_YE_37_3, AnGL26 AnGL26_01128125-248
FD_YE_37_8_2, AnGL3 AnGL3_01424125-249
FD_YE_37_9_2, AnGL4 AnGL4_02368125-251
Syntrophus buswellii, Sbus Sbus_00475124-250
Syntrophomonas curvata, Scurva Scurva_02804124-251
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01127124-251
Syntrophomonas wolfei methylbutyratica, Swm Swm_02828124-251
Terrisporobacter hibernicus, AnGL54 AnGL54_03285124-251
FD-25-21, AnGL21 AnGL21_02732124-250
Sunxiuqinia elliptica, AnGL22 AnGL22_01130125-248
Paraclostridium benzoelyticum, AnGL27 AnGL27_00752124-251
FD-MS-7-8, AnGL9 AnGL9_03052125-250
FD-YE-37-9-3, AnGL29 AnGL29_03093125-251
Methylobacterium radiotolerans, GTSA1 PaGL#34_02475125-251
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05895126-250
Syntrophomonas erecta, GB-438 Ga0610585_02390124-251
Variovorax sp., EBFNA2 PaGL#33_05606125-250
Variovorax paradoxus, 2u118 PaGL#32_04892125-250
Dietzia cinnamea, 55 PaGL#56_02342125-251
Maridesulfovibrio salexigens, AnGL23 AnGL23_02039124-250
Exiguobacterium mexicanum, AnGL24 AnGL24_02970124-251
Clostridium subterminale, CB-LS10-1 AnGL53_03347124-251
Priestia megaterium, 10L1 PaGL#57_02124124-251
Variovorax paradoxus, SPNA7 PaGL#43_05079125-250
Methanospirillum lacunae, Ki8-1 MLKi8_0044188-216
Geodermatophilus sp., RDM14 PaGL#36_03785125-251
Methylorubrum populi, CTY4 PaGL#39_01909125-251
Fictibacillus phosphorivorans, TY7 PaGL#38_00525124-251
Methanospirillum hungatei, GP1 MhGP1_0066188-216
Methanospirillum stamsii, Pt1 MLKi8_0091088-216
Syntrophomonas wolfei, saponavida Swsap_00961124-251
Bacillus subtilis, 30VD-1 PaGL#66_00049124-251
Peribacillus frigoritolerans, 30N-5 PaGL#67_00133124-251
Micromonospora inositola, Utrum1 PaGL#61_06412125-251
Sphingomonas sp., CR2A3 PaGL#62_03486129-255
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00121124-251
Niallia taxi, AG-1 PaGL#37_00142124-251
Methanospirillum.hungatei GP1, MhGP1 8064048918:MhGP1_0224188-216
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113238:Mhun_0323589-216
MPOB, Sfum 639702325:Sfum_01607124-250
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1264:Spalm_02694124-251
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112490:Swol_02445124-251
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118127:Szehn_00287124-251
Syntrophus aciditrophicus, SB 637858612:SYN_00284124-250
Syntrophus gentianae, DSM8423 Ga0074853_10272:Sgen_00283124-250
Mucilaginibacter gossypii, cycad 4 PaGL#42_05870126-250
Ruminococcus callidus, ATCC 27760 Rcal_00124124-251
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