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Rcal_02887 Locus tags: • Sequence Length: 3738

Ruminococcus callidus, ATCC 27760 Batch5_genome_fasta/bc2083

200200400400600600800800100010001200120014001400160016001800180020002000220022002400240026002600280028003000300032003200340034003600360038003800
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Rcal_02884 Rcal_02886 Rcal_02887 Rcal_02888 Rcal_02889
    [SP]_[PF01345]_[PF01345]_[PF01345]_[PF17802]_[PF17802]_[PF17802]_[PF17802]_[PF17802]_[TM]

    [SP]_[356:PF01345]_[493:PF01345]_[593:PF01345]_[2119:PF17802]_[2249:PF17802]_[2512:PF17802]_[2773:PF17802]_[3322:PF17802]_[TM]

    [SP]_[356:IPR001434]_[493:IPR001434]_[593:IPR001434]_[2119:IPR041033]_[2249:IPR041033]_[2512:IPR041033]_[2773:IPR041033]_[3322:IPR041033]_[TM]
    

Looking for similar signatures in the working genomes

PF01345:DUF11. Domain of unknown function DUF11

Found 85 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512563.1:LOMAGDGF_01956525-633
WP_003516873.1:LOMAGDGF_02896305-406
Acetivibrio alkalicellulosi, DSM 17461 2510062856:NJMEOJLD_030451189-1289
2510063592:NJMEOJLD_03770653-766
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_00614418-528
WP_036942961.1:NEIHKHHH_00671469-582
WP_050753121.1:NEIHKHHH_01034265-367
WP_036940409.1:NEIHKHHH_01035268-381
WP_050753281.1:NEIHKHHH_0178315-125
WP_050753330.1:NEIHKHHH_020671966-2085
Terrisporobacter hibernicus, AnGL54 AnGL54_03868367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_04544734-846
Paraclostridium benzoelyticum, AnGL27 AnGL27_0113339-143
AnGL27_01134588-703
AnGL27_01135369-450
489-592
623-744
756-866
888-989
1018-1131
1152-1253
1285-1395
1547-1650
1676-1780
1941-2052
2073-2173
2205-2317
2341-2451
2473-2582
2602-2689
AnGL27_02557140-220
AnGL27_02558347-451
480-565
Methanospirillum hungatei, GP1 MhGP1_02715308-413
Bacillus subtilis, 30VD-1 PaGL#66_03695491-603
635-748
776-879
913-1024
1052-1157
1190-1301
1329-1434
PaGL#66_03699243-369
404-524
551-669
694-810
840-950
978-1091
1118-1222
Micromonospora inositola, Utrum1 PaGL#61_0006877-200
216-339
PaGL#61_0496342-164
171-297
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00697367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_01374734-846
Methanospirillum.hungatei GP1, MhGP1 8064046814:MhGP1_00188308-413
MPOB, Sfum 639701569:Sfum_00839467-582
Ruminococcus callidus, ATCC 27760 Rcal_02887356-460
493-578
593-709

PF01345:DUF11. Domain of unknown function DUF11

Found 85 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512563.1:LOMAGDGF_01956525-633
WP_003516873.1:LOMAGDGF_02896305-406
Acetivibrio alkalicellulosi, DSM 17461 2510062856:NJMEOJLD_030451189-1289
2510063592:NJMEOJLD_03770653-766
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_00614418-528
WP_036942961.1:NEIHKHHH_00671469-582
WP_050753121.1:NEIHKHHH_01034265-367
WP_036940409.1:NEIHKHHH_01035268-381
WP_050753281.1:NEIHKHHH_0178315-125
WP_050753330.1:NEIHKHHH_020671966-2085
Terrisporobacter hibernicus, AnGL54 AnGL54_03868367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_04544734-846
Paraclostridium benzoelyticum, AnGL27 AnGL27_0113339-143
AnGL27_01134588-703
AnGL27_01135369-450
489-592
623-744
756-866
888-989
1018-1131
1152-1253
1285-1395
1547-1650
1676-1780
1941-2052
2073-2173
2205-2317
2341-2451
2473-2582
2602-2689
AnGL27_02557140-220
AnGL27_02558347-451
480-565
Methanospirillum hungatei, GP1 MhGP1_02715308-413
Bacillus subtilis, 30VD-1 PaGL#66_03695491-603
635-748
776-879
913-1024
1052-1157
1190-1301
1329-1434
PaGL#66_03699243-369
404-524
551-669
694-810
840-950
978-1091
1118-1222
Micromonospora inositola, Utrum1 PaGL#61_0006877-200
216-339
PaGL#61_0496342-164
171-297
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00697367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_01374734-846
Methanospirillum.hungatei GP1, MhGP1 8064046814:MhGP1_00188308-413
MPOB, Sfum 639701569:Sfum_00839467-582
Ruminococcus callidus, ATCC 27760 Rcal_02887356-460
493-578
593-709

PF01345:DUF11. Domain of unknown function DUF11

Found 85 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512563.1:LOMAGDGF_01956525-633
WP_003516873.1:LOMAGDGF_02896305-406
Acetivibrio alkalicellulosi, DSM 17461 2510062856:NJMEOJLD_030451189-1289
2510063592:NJMEOJLD_03770653-766
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_00614418-528
WP_036942961.1:NEIHKHHH_00671469-582
WP_050753121.1:NEIHKHHH_01034265-367
WP_036940409.1:NEIHKHHH_01035268-381
WP_050753281.1:NEIHKHHH_0178315-125
WP_050753330.1:NEIHKHHH_020671966-2085
Terrisporobacter hibernicus, AnGL54 AnGL54_03868367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_04544734-846
Paraclostridium benzoelyticum, AnGL27 AnGL27_0113339-143
AnGL27_01134588-703
AnGL27_01135369-450
489-592
623-744
756-866
888-989
1018-1131
1152-1253
1285-1395
1547-1650
1676-1780
1941-2052
2073-2173
2205-2317
2341-2451
2473-2582
2602-2689
AnGL27_02557140-220
AnGL27_02558347-451
480-565
Methanospirillum hungatei, GP1 MhGP1_02715308-413
Bacillus subtilis, 30VD-1 PaGL#66_03695491-603
635-748
776-879
913-1024
1052-1157
1190-1301
1329-1434
PaGL#66_03699243-369
404-524
551-669
694-810
840-950
978-1091
1118-1222
Micromonospora inositola, Utrum1 PaGL#61_0006877-200
216-339
PaGL#61_0496342-164
171-297
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00697367-446
487-591
622-727
1017-1130
1151-1275
1286-1387
1552-1648
1682-1786
1816-1917
1947-2050
2079-2179
2350-2460
2483-2593
2615-2702
AnGL54_01374734-846
Methanospirillum.hungatei GP1, MhGP1 8064046814:MhGP1_00188308-413
MPOB, Sfum 639701569:Sfum_00839467-582
Ruminococcus callidus, ATCC 27760 Rcal_02887356-460
493-578
593-709

PF17802:SpaA. Prealbumin-like fold domain

Found 90 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013499802.1:HCIAFFOI_03326282-336
647-728
752-819
846-892
940-1001
1032-1095
1123-1179
WP_013483485.1:HCIAFFOI_03602558-635
668-765
800-873
909-975
1000-1070
WP_013483846.1:HCIAFFOI_03998766-829
1108-1187
1254-1330
1371-1446
1476-1548
1571-1635
1673-1739
1761-1828
1850-1916
1938-2004
WP_013498079.1:HCIAFFOI_01449284-340
560-622
664-732
759-830
897-974
1018-1090
1121-1193
1215-1277
1317-1383
1405-1472
WP_013498244.1:HCIAFFOI_01636205-267
Paenibacillus guangzhouensis, KCTC 33171 WP_152394206.1:KDFAKKPF_029651091-1150
WP_227793641.1:KDFAKKPF_03318936-1004
1028-1101
1128-1194
1224-1293
FD_YE_37_3, AnGL26 AnGL26_0207042-87
FD_YE_37_9_2, AnGL4 AnGL4_009231090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Terrisporobacter hibernicus, AnGL54 AnGL54_01204350-421
Sunxiuqinia elliptica, AnGL22 AnGL22_0206742-87
Paraclostridium benzoelyticum, AnGL27 AnGL27_02826592-659
687-750
778-846
FD-YE-37-9-3, AnGL29 AnGL29_016481090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Clostridium subterminale, CB-LS10-1 AnGL53_00378879-947
973-1044
1069-1141
1166-1238
1263-1335
1361-1428
1451-1517
Syntrophomonas wolfei, saponavida Swsap_0339066-130
Bacillus subtilis, 30VD-1 PaGL#66_006681152-1210
1246-1317
1344-1411
1438-1505
1532-1599
1626-1694
1721-1788
1814-1891
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01932350-421
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02053175-236
268-351
377-442
473-546
Ruminococcus callidus, ATCC 27760 Rcal_02403286-342
560-620
664-733
760-839
902-978
1022-1093
1125-1198
1220-1281
Rcal_028872119-2213
2249-2338
2512-2608
2773-2869
3322-3389

PF17802:SpaA. Prealbumin-like fold domain

Found 90 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013499802.1:HCIAFFOI_03326282-336
647-728
752-819
846-892
940-1001
1032-1095
1123-1179
WP_013483485.1:HCIAFFOI_03602558-635
668-765
800-873
909-975
1000-1070
WP_013483846.1:HCIAFFOI_03998766-829
1108-1187
1254-1330
1371-1446
1476-1548
1571-1635
1673-1739
1761-1828
1850-1916
1938-2004
WP_013498079.1:HCIAFFOI_01449284-340
560-622
664-732
759-830
897-974
1018-1090
1121-1193
1215-1277
1317-1383
1405-1472
WP_013498244.1:HCIAFFOI_01636205-267
Paenibacillus guangzhouensis, KCTC 33171 WP_152394206.1:KDFAKKPF_029651091-1150
WP_227793641.1:KDFAKKPF_03318936-1004
1028-1101
1128-1194
1224-1293
FD_YE_37_3, AnGL26 AnGL26_0207042-87
FD_YE_37_9_2, AnGL4 AnGL4_009231090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Terrisporobacter hibernicus, AnGL54 AnGL54_01204350-421
Sunxiuqinia elliptica, AnGL22 AnGL22_0206742-87
Paraclostridium benzoelyticum, AnGL27 AnGL27_02826592-659
687-750
778-846
FD-YE-37-9-3, AnGL29 AnGL29_016481090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Clostridium subterminale, CB-LS10-1 AnGL53_00378879-947
973-1044
1069-1141
1166-1238
1263-1335
1361-1428
1451-1517
Syntrophomonas wolfei, saponavida Swsap_0339066-130
Bacillus subtilis, 30VD-1 PaGL#66_006681152-1210
1246-1317
1344-1411
1438-1505
1532-1599
1626-1694
1721-1788
1814-1891
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01932350-421
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02053175-236
268-351
377-442
473-546
Ruminococcus callidus, ATCC 27760 Rcal_02403286-342
560-620
664-733
760-839
902-978
1022-1093
1125-1198
1220-1281
Rcal_028872119-2213
2249-2338
2512-2608
2773-2869
3322-3389

PF17802:SpaA. Prealbumin-like fold domain

Found 90 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013499802.1:HCIAFFOI_03326282-336
647-728
752-819
846-892
940-1001
1032-1095
1123-1179
WP_013483485.1:HCIAFFOI_03602558-635
668-765
800-873
909-975
1000-1070
WP_013483846.1:HCIAFFOI_03998766-829
1108-1187
1254-1330
1371-1446
1476-1548
1571-1635
1673-1739
1761-1828
1850-1916
1938-2004
WP_013498079.1:HCIAFFOI_01449284-340
560-622
664-732
759-830
897-974
1018-1090
1121-1193
1215-1277
1317-1383
1405-1472
WP_013498244.1:HCIAFFOI_01636205-267
Paenibacillus guangzhouensis, KCTC 33171 WP_152394206.1:KDFAKKPF_029651091-1150
WP_227793641.1:KDFAKKPF_03318936-1004
1028-1101
1128-1194
1224-1293
FD_YE_37_3, AnGL26 AnGL26_0207042-87
FD_YE_37_9_2, AnGL4 AnGL4_009231090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Terrisporobacter hibernicus, AnGL54 AnGL54_01204350-421
Sunxiuqinia elliptica, AnGL22 AnGL22_0206742-87
Paraclostridium benzoelyticum, AnGL27 AnGL27_02826592-659
687-750
778-846
FD-YE-37-9-3, AnGL29 AnGL29_016481090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Clostridium subterminale, CB-LS10-1 AnGL53_00378879-947
973-1044
1069-1141
1166-1238
1263-1335
1361-1428
1451-1517
Syntrophomonas wolfei, saponavida Swsap_0339066-130
Bacillus subtilis, 30VD-1 PaGL#66_006681152-1210
1246-1317
1344-1411
1438-1505
1532-1599
1626-1694
1721-1788
1814-1891
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01932350-421
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02053175-236
268-351
377-442
473-546
Ruminococcus callidus, ATCC 27760 Rcal_02403286-342
560-620
664-733
760-839
902-978
1022-1093
1125-1198
1220-1281
Rcal_028872119-2213
2249-2338
2512-2608
2773-2869
3322-3389

PF17802:SpaA. Prealbumin-like fold domain

Found 90 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013499802.1:HCIAFFOI_03326282-336
647-728
752-819
846-892
940-1001
1032-1095
1123-1179
WP_013483485.1:HCIAFFOI_03602558-635
668-765
800-873
909-975
1000-1070
WP_013483846.1:HCIAFFOI_03998766-829
1108-1187
1254-1330
1371-1446
1476-1548
1571-1635
1673-1739
1761-1828
1850-1916
1938-2004
WP_013498079.1:HCIAFFOI_01449284-340
560-622
664-732
759-830
897-974
1018-1090
1121-1193
1215-1277
1317-1383
1405-1472
WP_013498244.1:HCIAFFOI_01636205-267
Paenibacillus guangzhouensis, KCTC 33171 WP_152394206.1:KDFAKKPF_029651091-1150
WP_227793641.1:KDFAKKPF_03318936-1004
1028-1101
1128-1194
1224-1293
FD_YE_37_3, AnGL26 AnGL26_0207042-87
FD_YE_37_9_2, AnGL4 AnGL4_009231090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Terrisporobacter hibernicus, AnGL54 AnGL54_01204350-421
Sunxiuqinia elliptica, AnGL22 AnGL22_0206742-87
Paraclostridium benzoelyticum, AnGL27 AnGL27_02826592-659
687-750
778-846
FD-YE-37-9-3, AnGL29 AnGL29_016481090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Clostridium subterminale, CB-LS10-1 AnGL53_00378879-947
973-1044
1069-1141
1166-1238
1263-1335
1361-1428
1451-1517
Syntrophomonas wolfei, saponavida Swsap_0339066-130
Bacillus subtilis, 30VD-1 PaGL#66_006681152-1210
1246-1317
1344-1411
1438-1505
1532-1599
1626-1694
1721-1788
1814-1891
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01932350-421
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02053175-236
268-351
377-442
473-546
Ruminococcus callidus, ATCC 27760 Rcal_02403286-342
560-620
664-733
760-839
902-978
1022-1093
1125-1198
1220-1281
Rcal_028872119-2213
2249-2338
2512-2608
2773-2869
3322-3389

PF17802:SpaA. Prealbumin-like fold domain

Found 90 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013499802.1:HCIAFFOI_03326282-336
647-728
752-819
846-892
940-1001
1032-1095
1123-1179
WP_013483485.1:HCIAFFOI_03602558-635
668-765
800-873
909-975
1000-1070
WP_013483846.1:HCIAFFOI_03998766-829
1108-1187
1254-1330
1371-1446
1476-1548
1571-1635
1673-1739
1761-1828
1850-1916
1938-2004
WP_013498079.1:HCIAFFOI_01449284-340
560-622
664-732
759-830
897-974
1018-1090
1121-1193
1215-1277
1317-1383
1405-1472
WP_013498244.1:HCIAFFOI_01636205-267
Paenibacillus guangzhouensis, KCTC 33171 WP_152394206.1:KDFAKKPF_029651091-1150
WP_227793641.1:KDFAKKPF_03318936-1004
1028-1101
1128-1194
1224-1293
FD_YE_37_3, AnGL26 AnGL26_0207042-87
FD_YE_37_9_2, AnGL4 AnGL4_009231090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Terrisporobacter hibernicus, AnGL54 AnGL54_01204350-421
Sunxiuqinia elliptica, AnGL22 AnGL22_0206742-87
Paraclostridium benzoelyticum, AnGL27 AnGL27_02826592-659
687-750
778-846
FD-YE-37-9-3, AnGL29 AnGL29_016481090-1137
1163-1230
1257-1324
1350-1416
1442-1512
1539-1606
Clostridium subterminale, CB-LS10-1 AnGL53_00378879-947
973-1044
1069-1141
1166-1238
1263-1335
1361-1428
1451-1517
Syntrophomonas wolfei, saponavida Swsap_0339066-130
Bacillus subtilis, 30VD-1 PaGL#66_006681152-1210
1246-1317
1344-1411
1438-1505
1532-1599
1626-1694
1721-1788
1814-1891
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01932350-421
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02053175-236
268-351
377-442
473-546
Ruminococcus callidus, ATCC 27760 Rcal_02403286-342
560-620
664-733
760-839
902-978
1022-1093
1125-1198
1220-1281
Rcal_028872119-2213
2249-2338
2512-2608
2773-2869
3322-3389
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