Cellulosome Database Gene Detail

PROKKA_02679 Locus tags: • Sequence Length: 635

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

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    [SP]_[PF01344]_[PF01344]_[PF01344]_[PF01344]_[PF01344]_[TM]

    [SP]_[336:PF01344]_[383:PF01344]_[429:PF01344]_[481:PF01344]_[522:PF01344]_[TM]

    [SP]_[239:IPR003961]_[241:IPR003961]_[251:IPR036116]_[323:IPR011043]_[336:IPR006652]_[346:IPR006652]_[383:IPR006652]_[394:IPR006652]_[429:IPR006652]_[441:IPR006652]_[481:IPR006652]_[488:IPR006652]_[522:IPR006652]_[534:IPR006652]_[TM]

Looking for similar signatures in the working genomes

PF01344:Kelch_1. Kelch motif

Found 69 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522593.1:LOMAGDGF_00623	22-73
		85-120
		137-180
		187-230
		236-271
		283-313
Acetivibrio alkalicellulosi, DSM 17461	2510060367:NJMEOJLD_00615	490-536
	2510060840:NJMEOJLD_01077	466-519
	2510061699:NJMEOJLD_01915	1677-1715
		1726-1769
		1776-1821
		1822-1862
	2510062070:NJMEOJLD_02278	570-610
	2510064181:NJMEOJLD_04349	490-533
		584-631
		648-680
		684-726
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753016.1:NEIHKHHH_00518	743-789
		791-836
		837-884
		885-932
		936-979
	WP_036945771.1:NEIHKHHH_01262	587-635
		735-781
	WP_036943752.1:NEIHKHHH_01449	673-706
		716-747
	WP_050753286.1:NEIHKHHH_01809	568-615
	WP_050753797.1:NEIHKHHH_05071	842-884
		889-930
		932-977
		978-1019
		1070-1114
		1117-1163
		1167-1216
		1217-1273
		1274-1323
	WP_050753885.1:NEIHKHHH_05481	162-197
		215-255
		270-304
		322-368
	WP_036944933.1:NEIHKHHH_05592	890-934
		936-978
		1000-1045
		1093-1132
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_171003596.1:PROKKA_00800	44-87
		90-124
	WP_137698542.1:PROKKA_02342	59-100
	WP_171003635.1:PROKKA_02679	336-380
		383-428
		429-475
		481-521
		522-563
FD_YE_37_8_2, AnGL3	AnGL3_00447	44-93
		195-235
Syntrophus buswellii, Sbus	Sbus_01750	99-144
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_05186	94-140
		206-255
Variovorax paradoxus, 2u118	PaGL#32_02248	456-494
Variovorax paradoxus, SPNA7	PaGL#43_03564	132-178
		279-333
Methanospirillum lacunae, Ki8-1	MLKi8_03164	618-662
		715-759
Methylorubrum populi, CTY4	PaGL#39_00422	81-131
		178-226
		227-272
Bacillus subtilis, 30VD-1	PaGL#66_01508	3-48
		101-137
Micromonospora inositola, Utrum1	PaGL#61_02635	1034-1076
		1077-1121

PF01344:Kelch_1. Kelch motif

Found 69 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522593.1:LOMAGDGF_00623	22-73
		85-120
		137-180
		187-230
		236-271
		283-313
Acetivibrio alkalicellulosi, DSM 17461	2510060367:NJMEOJLD_00615	490-536
	2510060840:NJMEOJLD_01077	466-519
	2510061699:NJMEOJLD_01915	1677-1715
		1726-1769
		1776-1821
		1822-1862
	2510062070:NJMEOJLD_02278	570-610
	2510064181:NJMEOJLD_04349	490-533
		584-631
		648-680
		684-726
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753016.1:NEIHKHHH_00518	743-789
		791-836
		837-884
		885-932
		936-979
	WP_036945771.1:NEIHKHHH_01262	587-635
		735-781
	WP_036943752.1:NEIHKHHH_01449	673-706
		716-747
	WP_050753286.1:NEIHKHHH_01809	568-615
	WP_050753797.1:NEIHKHHH_05071	842-884
		889-930
		932-977
		978-1019
		1070-1114
		1117-1163
		1167-1216
		1217-1273
		1274-1323
	WP_050753885.1:NEIHKHHH_05481	162-197
		215-255
		270-304
		322-368
	WP_036944933.1:NEIHKHHH_05592	890-934
		936-978
		1000-1045
		1093-1132
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_171003596.1:PROKKA_00800	44-87
		90-124
	WP_137698542.1:PROKKA_02342	59-100
	WP_171003635.1:PROKKA_02679	336-380
		383-428
		429-475
		481-521
		522-563
FD_YE_37_8_2, AnGL3	AnGL3_00447	44-93
		195-235
Syntrophus buswellii, Sbus	Sbus_01750	99-144
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_05186	94-140
		206-255
Variovorax paradoxus, 2u118	PaGL#32_02248	456-494
Variovorax paradoxus, SPNA7	PaGL#43_03564	132-178
		279-333
Methanospirillum lacunae, Ki8-1	MLKi8_03164	618-662
		715-759
Methylorubrum populi, CTY4	PaGL#39_00422	81-131
		178-226
		227-272
Bacillus subtilis, 30VD-1	PaGL#66_01508	3-48
		101-137
Micromonospora inositola, Utrum1	PaGL#61_02635	1034-1076
		1077-1121

PF01344:Kelch_1. Kelch motif

Found 69 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522593.1:LOMAGDGF_00623	22-73
		85-120
		137-180
		187-230
		236-271
		283-313
Acetivibrio alkalicellulosi, DSM 17461	2510060367:NJMEOJLD_00615	490-536
	2510060840:NJMEOJLD_01077	466-519
	2510061699:NJMEOJLD_01915	1677-1715
		1726-1769
		1776-1821
		1822-1862
	2510062070:NJMEOJLD_02278	570-610
	2510064181:NJMEOJLD_04349	490-533
		584-631
		648-680
		684-726
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753016.1:NEIHKHHH_00518	743-789
		791-836
		837-884
		885-932
		936-979
	WP_036945771.1:NEIHKHHH_01262	587-635
		735-781
	WP_036943752.1:NEIHKHHH_01449	673-706
		716-747
	WP_050753286.1:NEIHKHHH_01809	568-615
	WP_050753797.1:NEIHKHHH_05071	842-884
		889-930
		932-977
		978-1019
		1070-1114
		1117-1163
		1167-1216
		1217-1273
		1274-1323
	WP_050753885.1:NEIHKHHH_05481	162-197
		215-255
		270-304
		322-368
	WP_036944933.1:NEIHKHHH_05592	890-934
		936-978
		1000-1045
		1093-1132
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_171003596.1:PROKKA_00800	44-87
		90-124
	WP_137698542.1:PROKKA_02342	59-100
	WP_171003635.1:PROKKA_02679	336-380
		383-428
		429-475
		481-521
		522-563
FD_YE_37_8_2, AnGL3	AnGL3_00447	44-93
		195-235
Syntrophus buswellii, Sbus	Sbus_01750	99-144
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_05186	94-140
		206-255
Variovorax paradoxus, 2u118	PaGL#32_02248	456-494
Variovorax paradoxus, SPNA7	PaGL#43_03564	132-178
		279-333
Methanospirillum lacunae, Ki8-1	MLKi8_03164	618-662
		715-759
Methylorubrum populi, CTY4	PaGL#39_00422	81-131
		178-226
		227-272
Bacillus subtilis, 30VD-1	PaGL#66_01508	3-48
		101-137
Micromonospora inositola, Utrum1	PaGL#61_02635	1034-1076
		1077-1121

PF01344:Kelch_1. Kelch motif

Found 69 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522593.1:LOMAGDGF_00623	22-73
		85-120
		137-180
		187-230
		236-271
		283-313
Acetivibrio alkalicellulosi, DSM 17461	2510060367:NJMEOJLD_00615	490-536
	2510060840:NJMEOJLD_01077	466-519
	2510061699:NJMEOJLD_01915	1677-1715
		1726-1769
		1776-1821
		1822-1862
	2510062070:NJMEOJLD_02278	570-610
	2510064181:NJMEOJLD_04349	490-533
		584-631
		648-680
		684-726
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753016.1:NEIHKHHH_00518	743-789
		791-836
		837-884
		885-932
		936-979
	WP_036945771.1:NEIHKHHH_01262	587-635
		735-781
	WP_036943752.1:NEIHKHHH_01449	673-706
		716-747
	WP_050753286.1:NEIHKHHH_01809	568-615
	WP_050753797.1:NEIHKHHH_05071	842-884
		889-930
		932-977
		978-1019
		1070-1114
		1117-1163
		1167-1216
		1217-1273
		1274-1323
	WP_050753885.1:NEIHKHHH_05481	162-197
		215-255
		270-304
		322-368
	WP_036944933.1:NEIHKHHH_05592	890-934
		936-978
		1000-1045
		1093-1132
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_171003596.1:PROKKA_00800	44-87
		90-124
	WP_137698542.1:PROKKA_02342	59-100
	WP_171003635.1:PROKKA_02679	336-380
		383-428
		429-475
		481-521
		522-563
FD_YE_37_8_2, AnGL3	AnGL3_00447	44-93
		195-235
Syntrophus buswellii, Sbus	Sbus_01750	99-144
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_05186	94-140
		206-255
Variovorax paradoxus, 2u118	PaGL#32_02248	456-494
Variovorax paradoxus, SPNA7	PaGL#43_03564	132-178
		279-333
Methanospirillum lacunae, Ki8-1	MLKi8_03164	618-662
		715-759
Methylorubrum populi, CTY4	PaGL#39_00422	81-131
		178-226
		227-272
Bacillus subtilis, 30VD-1	PaGL#66_01508	3-48
		101-137
Micromonospora inositola, Utrum1	PaGL#61_02635	1034-1076
		1077-1121

PF01344:Kelch_1. Kelch motif

Found 69 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522593.1:LOMAGDGF_00623	22-73
		85-120
		137-180
		187-230
		236-271
		283-313
Acetivibrio alkalicellulosi, DSM 17461	2510060367:NJMEOJLD_00615	490-536
	2510060840:NJMEOJLD_01077	466-519
	2510061699:NJMEOJLD_01915	1677-1715
		1726-1769
		1776-1821
		1822-1862
	2510062070:NJMEOJLD_02278	570-610
	2510064181:NJMEOJLD_04349	490-533
		584-631
		648-680
		684-726
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753016.1:NEIHKHHH_00518	743-789
		791-836
		837-884
		885-932
		936-979
	WP_036945771.1:NEIHKHHH_01262	587-635
		735-781
	WP_036943752.1:NEIHKHHH_01449	673-706
		716-747
	WP_050753286.1:NEIHKHHH_01809	568-615
	WP_050753797.1:NEIHKHHH_05071	842-884
		889-930
		932-977
		978-1019
		1070-1114
		1117-1163
		1167-1216
		1217-1273
		1274-1323
	WP_050753885.1:NEIHKHHH_05481	162-197
		215-255
		270-304
		322-368
	WP_036944933.1:NEIHKHHH_05592	890-934
		936-978
		1000-1045
		1093-1132
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_171003596.1:PROKKA_00800	44-87
		90-124
	WP_137698542.1:PROKKA_02342	59-100
	WP_171003635.1:PROKKA_02679	336-380
		383-428
		429-475
		481-521
		522-563
FD_YE_37_8_2, AnGL3	AnGL3_00447	44-93
		195-235
Syntrophus buswellii, Sbus	Sbus_01750	99-144
Mucilaginibacter sabulilitoris, SNA2	PaGL#35_05186	94-140
		206-255
Variovorax paradoxus, 2u118	PaGL#32_02248	456-494
Variovorax paradoxus, SPNA7	PaGL#43_03564	132-178
		279-333
Methanospirillum lacunae, Ki8-1	MLKi8_03164	618-662
		715-759
Methylorubrum populi, CTY4	PaGL#39_00422	81-131
		178-226
		227-272
Bacillus subtilis, 30VD-1	PaGL#66_01508	3-48
		101-137
Micromonospora inositola, Utrum1	PaGL#61_02635	1034-1076
		1077-1121

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