SMPP Home

NEIHKHHH_00659 Locus tags: • Sequence Length: 478

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

5050100100150150200200250250300300350350400400450450500500
Show complete sequence
Click domain (colored bar) to show sequence
NEIHKHHH_00657 NEIHKHHH_00658 
    [SP]_[PF00942]_[PF16990]_[PF16990]_[TM]

    [SP]_[35:PF00942]_[189:PF16990]_[331:PF16990]_[TM]

    [SP]_[28:IPR001956]_[30:IPR008965]_[34:IPR001956]_[35:IPR001956]_[188:IPR005084]_[189:IPR005084]_[189:IPR008979]_[330:IPR005084]_[330:IPR008979]_[331:IPR005084]_[TM]

Looking for similar signatures in the working genomes

PF00942:CBM_3. Cellulose binding domain

Found 85 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516421.1:LOMAGDGF_0005752-139
WP_257203883.1:LOMAGDGF_0009554-150
WP_003515342.1:LOMAGDGF_00363567-654
743-825
WP_003514383.1:LOMAGDGF_00364485-563
WP_014522594.1:LOMAGDGF_00651370-461
WP_003517483.1:LOMAGDGF_0103740-124
WP_003516278.1:LOMAGDGF_01523488-571
WP_003520969.1:LOMAGDGF_01651474-558
WP_003517663.1:LOMAGDGF_01714488-571
WP_003517595.1:LOMAGDGF_01749486-569
WP_003519072.1:LOMAGDGF_01845554-631
WP_003519027.1:LOMAGDGF_018651006-1072
WP_003512704.1:LOMAGDGF_01874376-458
LOMAGDGF_02021162-244
LOMAGDGF_02025520-602
WP_003512026.1:LOMAGDGF_02232792-874
WP_003518401.1:LOMAGDGF_02244343-424
WP_003518381.1:LOMAGDGF_02260515-582
WP_003518379.1:LOMAGDGF_02263535-616
741-823
WP_003516879.1:LOMAGDGF_0288956-111
WP_003513365.1:LOMAGDGF_03115546-634
724-806
Clostridium acetobutylicum, DSM 1731 WP_010964228.1:FHOCHPCF_0095739-128
WP_010964231.1:FHOCHPCF_00960495-578
WP_010964234.1:FHOCHPCF_00963486-567
Acetivibrio alkalicellulosi, DSM 17461 2510059903:NJMEOJLD_00165151-233
2510059916:NJMEOJLD_001782934-3014
2510060341:NJMEOJLD_00590478-561
2510060342:NJMEOJLD_00591563-645
734-816
2510061821:NJMEOJLD_02035494-572
2510061882:NJMEOJLD_02091494-568
2510062372:NJMEOJLD_02572350-427
2510062491:NJMEOJLD_02690545-633
728-808
2510062800:NJMEOJLD_02993704-793
2510062802:NJMEOJLD_02995473-555
2510063762:NJMEOJLD_0393942-125
2510064018:NJMEOJLD_04189461-540
2510064155:NJMEOJLD_04324196-278
359-440
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853225.1:NEIHKHHH_00292543-634
WP_050753006.1:NEIHKHHH_00490570-652
743-823
WP_050753007.1:NEIHKHHH_00491150-222
WP_242853234.1:NEIHKHHH_00524485-561
WP_081927360.1:NEIHKHHH_00525574-657
756-827
WP_242853237.1:NEIHKHHH_00526569-656
745-827
WP_081927368.1:NEIHKHHH_00527484-566
WP_036942937.1:NEIHKHHH_0065935-114
WP_152965906.1:NEIHKHHH_00732364-445
WP_081926896.1:NEIHKHHH_00829479-563
WP_152965920.1:NEIHKHHH_0089126-107
WP_242853107.1:NEIHKHHH_01001504-576
WP_050753192.1:NEIHKHHH_01340494-576
NEIHKHHH_01499498-580
WP_036937909.1:NEIHKHHH_0182141-125
WP_050753331.1:NEIHKHHH_02068970-1046
WP_036944512.1:NEIHKHHH_025112912-2985
WP_050753524.1:NEIHKHHH_03264460-541
WP_036945540.1:NEIHKHHH_0348027-72
NEIHKHHH_03857485-561
WP_050753639.1:NEIHKHHH_0400836-105
WP_201782028.1:NEIHKHHH_04064557-639
760-841
WP_036944371.1:NEIHKHHH_0458738-121
197-272
WP_036935605.1:NEIHKHHH_0474543-125
WP_050753749.1:NEIHKHHH_0475436-114
WP_050753768.1:NEIHKHHH_0490438-115
WP_050753769.1:NEIHKHHH_04905315-383
WP_036943545.1:NEIHKHHH_05257513-582
WP_050753928.1:NEIHKHHH_05666940-1022
WP_036939965.1:NEIHKHHH_05716380-461
Ruminococcus albus_7, DSM 20455 WP_013497787.1:HCIAFFOI_01126673-761
WP_013499061.1:HCIAFFOI_02516526-608
Paenibacillus guangzhouensis, KCTC 33171 WP_227793620.1:KDFAKKPF_01970661-741
KDFAKKPF_01971473-553
Clostridium acetobutylicum, ATCC 824 WP_010964228.1:OJAMHIDJ_0096039-128
WP_010964231.1:OJAMHIDJ_00963495-578
WP_010964234.1:OJAMHIDJ_00966486-567

PF16990:CBM_35. Carbohydrate binding module (family 35)

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514483.1:LOMAGDGF_0041364-165
WP_003516694.1:LOMAGDGF_02878446-579
Acetivibrio alkalicellulosi, DSM 17461 2510060352:NJMEOJLD_0060059-161
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942937.1:NEIHKHHH_00659189-315
331-454
WP_242853161.1:NEIHKHHH_0125836-165
WP_036937909.1:NEIHKHHH_01821240-362
WP_050753297.1:NEIHKHHH_01862541-665
730-855
863-988
Ruminococcus albus_7, DSM 20455 WP_013499723.1:HCIAFFOI_0324489-209
WP_013497048.1:HCIAFFOI_0030880-198
WP_013497066.1:HCIAFFOI_0032653-153
WP_013497076.1:HCIAFFOI_0033634-141
WP_013497231.1:HCIAFFOI_00508667-761
WP_013497232.1:HCIAFFOI_00509660-763
WP_013497568.1:HCIAFFOI_0090029-146
WP_013498051.1:HCIAFFOI_0142068-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152392020.1:KDFAKKPF_00450783-892
WP_227793639.1:KDFAKKPF_0328742-163
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696808.1:PROKKA_0283665-165
FD-MS-7-8, AnGL9 AnGL9_01880665-789
Micromonospora inositola, Utrum1 PaGL#61_03173678-806
Ruminococcus callidus, ATCC 27760 Rcal_00688104-206
Rcal_0112576-176
Rcal_0199934-155

PF16990:CBM_35. Carbohydrate binding module (family 35)

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514483.1:LOMAGDGF_0041364-165
WP_003516694.1:LOMAGDGF_02878446-579
Acetivibrio alkalicellulosi, DSM 17461 2510060352:NJMEOJLD_0060059-161
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942937.1:NEIHKHHH_00659189-315
331-454
WP_242853161.1:NEIHKHHH_0125836-165
WP_036937909.1:NEIHKHHH_01821240-362
WP_050753297.1:NEIHKHHH_01862541-665
730-855
863-988
Ruminococcus albus_7, DSM 20455 WP_013499723.1:HCIAFFOI_0324489-209
WP_013497048.1:HCIAFFOI_0030880-198
WP_013497066.1:HCIAFFOI_0032653-153
WP_013497076.1:HCIAFFOI_0033634-141
WP_013497231.1:HCIAFFOI_00508667-761
WP_013497232.1:HCIAFFOI_00509660-763
WP_013497568.1:HCIAFFOI_0090029-146
WP_013498051.1:HCIAFFOI_0142068-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152392020.1:KDFAKKPF_00450783-892
WP_227793639.1:KDFAKKPF_0328742-163
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696808.1:PROKKA_0283665-165
FD-MS-7-8, AnGL9 AnGL9_01880665-789
Micromonospora inositola, Utrum1 PaGL#61_03173678-806
Ruminococcus callidus, ATCC 27760 Rcal_00688104-206
Rcal_0112576-176
Rcal_0199934-155
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA