SMPP Home

NEIHKHHH_01862 Locus tags: • Sequence Length: 1039

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

50501001001501502002002502503003003503504004004504505005005505506006006506507007007507508008008508509009009509501000100010501050
Show complete sequence
Click domain (colored bar) to show sequence
NEIHKHHH_01857 NEIHKHHH_01859 NEIHKHHH_01861 NEIHKHHH_01862 NEIHKHHH_01865 NEIHKHHH_01866 
    [SP]_[PF02449]_[PF16116]_[PF16990]_[PF16990]_[PF16990]_[TM]

    [SP]_[76:PF02449]_[294:PF16116]_[541:PF16990]_[730:PF16990]_[863:PF16990]_[TM]

    [SP]_[74:IPR017853]_[76:IPR013529]_[294:IPR032267]_[539:IPR008979]_[540:IPR005084]_[541:IPR005084]_[728:IPR008979]_[729:IPR005084]_[730:IPR005084]_[861:IPR008979]_[862:IPR005084]_[863:IPR005084]_[TM]

Looking for similar signatures in the working genomes

PF02449:Glyco_hydro_42. Beta-galactosidase

Found 38 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753297.1:NEIHKHHH_0186276-191
Paenibacillus guangzhouensis, KCTC 33171 WP_152395190.1:KDFAKKPF_04118515-611
WP_152395217.1:KDFAKKPF_04147520-641
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696326.1:PROKKA_0169314-386
FD_MS_7_1, AnGL28 AnGL28_01404300-415
AnGL28_01735456-630
AnGL28_01746427-589
AnGL28_01773224-520
AnGL28_01787341-493
FD_SO4_25_1_F22, AnGL30 AnGL30_00564213-497
FD_SO4_37_1, AnGL2 AnGL2_00533300-415
AnGL2_00864456-630
AnGL2_00875427-589
AnGL2_00902224-520
AnGL2_00916341-493
FD_YE_37_9_2, AnGL4 AnGL4_0131217-392
AnGL4_0143312-381
FD-YE-37-9-3, AnGL29 AnGL29_0203717-392
AnGL29_0215812-381
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0152634-401
Exiguobacterium mexicanum, AnGL24 AnGL24_024585-378
Priestia megaterium, 10L1 PaGL#57_055965-379
Bacillus subtilis, 30VD-1 PaGL#66_0088619-400
PaGL#66_034678-374
Micromonospora inositola, Utrum1 PaGL#61_0201713-384
Sphingomonas sp., CR2A3 PaGL#62_0042644-405
PaGL#62_0044439-403
PaGL#62_0052054-414
PaGL#62_0213581-251
Niallia taxi, AG-1 PaGL#37_0472014-393
PaGL#37_0105219-401
PaGL#37_0201510-371
Mucilaginibacter gossypii, cycad 4 PaGL#42_0206268-222
PaGL#42_0359931-397
PaGL#42_0360226-404
PaGL#42_0381434-402
PaGL#42_0446689-219
PaGL#42_0549769-240

PF16116:DUF4832. Domain of unknown function (DUF4832)

Found 8 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753297.1:NEIHKHHH_01862294-455
WP_050753303.1:NEIHKHHH_01880316-483
Ruminococcus albus_7, DSM 20455 HCIAFFOI_01196276-512
Paenibacillus guangzhouensis, KCTC 33171 WP_152394325.1:KDFAKKPF_03113357-484
FD_YE_25_21, AnGL21 AnGL21_03960398-518
FD_YE_37_9_2, AnGL4 AnGL4_01107221-402
FD-YE-37-9-3, AnGL29 AnGL29_01832221-402
Ruminococcus callidus, ATCC 27760 Rcal_01252243-466

PF16990:CBM_35. Carbohydrate binding module (family 35)

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514483.1:LOMAGDGF_0041364-165
WP_003516694.1:LOMAGDGF_02878446-579
Acetivibrio alkalicellulosi, DSM 17461 2510060352:NJMEOJLD_0060059-161
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942937.1:NEIHKHHH_00659189-315
331-454
WP_242853161.1:NEIHKHHH_0125836-165
WP_036937909.1:NEIHKHHH_01821240-362
WP_050753297.1:NEIHKHHH_01862541-665
730-855
863-988
Ruminococcus albus_7, DSM 20455 WP_013499723.1:HCIAFFOI_0324489-209
WP_013497048.1:HCIAFFOI_0030880-198
WP_013497066.1:HCIAFFOI_0032653-153
WP_013497076.1:HCIAFFOI_0033634-141
WP_013497231.1:HCIAFFOI_00508667-761
WP_013497232.1:HCIAFFOI_00509660-763
WP_013497568.1:HCIAFFOI_0090029-146
WP_013498051.1:HCIAFFOI_0142068-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152392020.1:KDFAKKPF_00450783-892
WP_227793639.1:KDFAKKPF_0328742-163
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696808.1:PROKKA_0283665-165
FD-MS-7-8, AnGL9 AnGL9_01880665-789
Micromonospora inositola, Utrum1 PaGL#61_03173678-806
Ruminococcus callidus, ATCC 27760 Rcal_00688104-206
Rcal_0112576-176
Rcal_0199934-155

PF16990:CBM_35. Carbohydrate binding module (family 35)

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514483.1:LOMAGDGF_0041364-165
WP_003516694.1:LOMAGDGF_02878446-579
Acetivibrio alkalicellulosi, DSM 17461 2510060352:NJMEOJLD_0060059-161
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942937.1:NEIHKHHH_00659189-315
331-454
WP_242853161.1:NEIHKHHH_0125836-165
WP_036937909.1:NEIHKHHH_01821240-362
WP_050753297.1:NEIHKHHH_01862541-665
730-855
863-988
Ruminococcus albus_7, DSM 20455 WP_013499723.1:HCIAFFOI_0324489-209
WP_013497048.1:HCIAFFOI_0030880-198
WP_013497066.1:HCIAFFOI_0032653-153
WP_013497076.1:HCIAFFOI_0033634-141
WP_013497231.1:HCIAFFOI_00508667-761
WP_013497232.1:HCIAFFOI_00509660-763
WP_013497568.1:HCIAFFOI_0090029-146
WP_013498051.1:HCIAFFOI_0142068-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152392020.1:KDFAKKPF_00450783-892
WP_227793639.1:KDFAKKPF_0328742-163
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696808.1:PROKKA_0283665-165
FD-MS-7-8, AnGL9 AnGL9_01880665-789
Micromonospora inositola, Utrum1 PaGL#61_03173678-806
Ruminococcus callidus, ATCC 27760 Rcal_00688104-206
Rcal_0112576-176
Rcal_0199934-155

PF16990:CBM_35. Carbohydrate binding module (family 35)

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514483.1:LOMAGDGF_0041364-165
WP_003516694.1:LOMAGDGF_02878446-579
Acetivibrio alkalicellulosi, DSM 17461 2510060352:NJMEOJLD_0060059-161
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942937.1:NEIHKHHH_00659189-315
331-454
WP_242853161.1:NEIHKHHH_0125836-165
WP_036937909.1:NEIHKHHH_01821240-362
WP_050753297.1:NEIHKHHH_01862541-665
730-855
863-988
Ruminococcus albus_7, DSM 20455 WP_013499723.1:HCIAFFOI_0324489-209
WP_013497048.1:HCIAFFOI_0030880-198
WP_013497066.1:HCIAFFOI_0032653-153
WP_013497076.1:HCIAFFOI_0033634-141
WP_013497231.1:HCIAFFOI_00508667-761
WP_013497232.1:HCIAFFOI_00509660-763
WP_013497568.1:HCIAFFOI_0090029-146
WP_013498051.1:HCIAFFOI_0142068-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152392020.1:KDFAKKPF_00450783-892
WP_227793639.1:KDFAKKPF_0328742-163
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696808.1:PROKKA_0283665-165
FD-MS-7-8, AnGL9 AnGL9_01880665-789
Micromonospora inositola, Utrum1 PaGL#61_03173678-806
Ruminococcus callidus, ATCC 27760 Rcal_00688104-206
Rcal_0112576-176
Rcal_0199934-155
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA