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NEIHKHHH_04136 Locus tags: • Sequence Length: 415

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

5050100100150150200200250250300300350350400400450450
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NEIHKHHH_04133 NEIHKHHH_04134 NEIHKHHH_04135 NEIHKHHH_04136 NEIHKHHH_04138 NEIHKHHH_04142 
    [PF01139]_[PF01139]

    [39:PF01139]_[130:PF01139]

    [4:IPR036025]_[39:IPR001233]_[130:IPR001233]

Looking for similar signatures in the working genomes

PF01139:RtcB. tRNA-splicing ligase RtcB

Found 57 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512380.1:LOMAGDGF_0204232-393
Clostridium acetobutylicum, DSM 1731 WP_013913616.1:FHOCHPCF_0343529-410
WP_010966653.1:FHOCHPCF_0343618-90
95-344
Acetivibrio alkalicellulosi, DSM 17461 2510059890:NJMEOJLD_0015231-393
2510063809:NJMEOJLD_0398420-92
116-366
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752995.1:NEIHKHHH_0042561-500
WP_036946374.1:NEIHKHHH_0042721-93
116-366
WP_036936181.1:NEIHKHHH_0413639-114
130-393
Ruminococcus albus_7, DSM 20455 WP_013497719.1:HCIAFFOI_0105537-114
128-397
WP_013498812.1:HCIAFFOI_0223630-411
Paenibacillus guangzhouensis, KCTC 33171 WP_152396694.1:KDFAKKPF_0592022-396
Clostridium acetobutylicum, ATCC 824 WP_013913616.1:OJAMHIDJ_0344629-410
WP_010966653.1:OJAMHIDJ_0344718-90
95-344
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697567.1:PROKKA_0062620-399
WP_137698090.1:PROKKA_0081537-389
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0098342-471
Syntrophus buswellii, Sbus Sbus_0000647-482
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0002242-471
Terrisporobacter hibernicus, AnGL54 AnGL54_0110537-113
131-404
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00975113-473
Syntrophomonas erecta, GB-438 Ga0610585_0098342-471
Variovorax sp., EBFNA2 PaGL#33_0513233-409
Variovorax paradoxus, 2u118 PaGL#32_0446132-408
Dietzia cinnamea, 55 PaGL#56_0151946-414
Maridesulfovibrio salexigens, AnGL23 AnGL23_0072744-475
Exiguobacterium mexicanum, AnGL24 AnGL24_0074026-106
127-390
Variovorax paradoxus, SPNA7 PaGL#43_0462729-405
Methanospirillum lacunae, Ki8-1 MLKi8_0077645-477
Geodermatophilus sp., RDM14 PaGL#36_0347221-392
Methanospirillum hungatei, GP1 MhGP1_0104445-477
Methanospirillum stamsii, Pt1 MLKi8_0129145-477
Micromonospora inositola, Utrum1 PaGL#61_0214832-89
129-370
PaGL#61_0399142-472
PaGL#61_0426928-399
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0183337-113
131-404
Niallia taxi, AG-1 PaGL#37_0157038-114
131-394
Methanospirillum.hungatei GP1, MhGP1 8064048529:MhGP1_0185845-477
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11757:Mhun_0075745-477
MPOB, Sfum 639703497:Sfum_0280155-493
Syntrophus aciditrophicus, SB 637858304:SYN_0000647-482
Syntrophus gentianae, DSM8423 Ga0074853_1041:Sgen_0063747-482
Mucilaginibacter gossypii, cycad 4 PaGL#42_02785113-473
PaGL#42_04082114-184
203-458
Ruminococcus callidus, ATCC 27760 Rcal_0155938-120
130-364

PF01139:RtcB. tRNA-splicing ligase RtcB

Found 57 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512380.1:LOMAGDGF_0204232-393
Clostridium acetobutylicum, DSM 1731 WP_013913616.1:FHOCHPCF_0343529-410
WP_010966653.1:FHOCHPCF_0343618-90
95-344
Acetivibrio alkalicellulosi, DSM 17461 2510059890:NJMEOJLD_0015231-393
2510063809:NJMEOJLD_0398420-92
116-366
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752995.1:NEIHKHHH_0042561-500
WP_036946374.1:NEIHKHHH_0042721-93
116-366
WP_036936181.1:NEIHKHHH_0413639-114
130-393
Ruminococcus albus_7, DSM 20455 WP_013497719.1:HCIAFFOI_0105537-114
128-397
WP_013498812.1:HCIAFFOI_0223630-411
Paenibacillus guangzhouensis, KCTC 33171 WP_152396694.1:KDFAKKPF_0592022-396
Clostridium acetobutylicum, ATCC 824 WP_013913616.1:OJAMHIDJ_0344629-410
WP_010966653.1:OJAMHIDJ_0344718-90
95-344
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697567.1:PROKKA_0062620-399
WP_137698090.1:PROKKA_0081537-389
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0098342-471
Syntrophus buswellii, Sbus Sbus_0000647-482
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0002242-471
Terrisporobacter hibernicus, AnGL54 AnGL54_0110537-113
131-404
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00975113-473
Syntrophomonas erecta, GB-438 Ga0610585_0098342-471
Variovorax sp., EBFNA2 PaGL#33_0513233-409
Variovorax paradoxus, 2u118 PaGL#32_0446132-408
Dietzia cinnamea, 55 PaGL#56_0151946-414
Maridesulfovibrio salexigens, AnGL23 AnGL23_0072744-475
Exiguobacterium mexicanum, AnGL24 AnGL24_0074026-106
127-390
Variovorax paradoxus, SPNA7 PaGL#43_0462729-405
Methanospirillum lacunae, Ki8-1 MLKi8_0077645-477
Geodermatophilus sp., RDM14 PaGL#36_0347221-392
Methanospirillum hungatei, GP1 MhGP1_0104445-477
Methanospirillum stamsii, Pt1 MLKi8_0129145-477
Micromonospora inositola, Utrum1 PaGL#61_0214832-89
129-370
PaGL#61_0399142-472
PaGL#61_0426928-399
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0183337-113
131-404
Niallia taxi, AG-1 PaGL#37_0157038-114
131-394
Methanospirillum.hungatei GP1, MhGP1 8064048529:MhGP1_0185845-477
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11757:Mhun_0075745-477
MPOB, Sfum 639703497:Sfum_0280155-493
Syntrophus aciditrophicus, SB 637858304:SYN_0000647-482
Syntrophus gentianae, DSM8423 Ga0074853_1041:Sgen_0063747-482
Mucilaginibacter gossypii, cycad 4 PaGL#42_02785113-473
PaGL#42_04082114-184
203-458
Ruminococcus callidus, ATCC 27760 Rcal_0155938-120
130-364
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