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PaGL#33_04702 Locus tags: • Sequence Length: 339

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350
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PaGL#33_04698 PaGL#33_04703 PaGL#33_04707
    [PF05658]_[PF05658]_[PF05658]_[PF05662]_[PF05662]_[PF03895]_[TM]

    [0:PF05658]_[22:PF05658]_[89:PF05658]_[156:PF05662]_[214:PF05662]_[267:PF03895]_[TM]

    [0:IPR008640]_[1:IPR011049]_[22:IPR008640]_[89:IPR008640]_[156:IPR008635]_[197:IPR011049]_[214:IPR008635]_[226:IPR045584]_[267:IPR005594]_[TM]
    

Looking for similar signatures in the working genomes

PF05658:YadA_head. YadA head domain repeat (2 copies)

Found 199 similar signatures
Methylobacterium radiotolerans, GTSA1 PaGL#34_03098253-280
267-293
283-307
295-319
323-350
Variovorax sp., EBFNA2 PaGL#33_06768146-173
160-186
174-198
188-215
202-229
448-471
472-496
702-725
759-779
813-832
822-849
836-863
850-877
864-889
878-905
907-933
922-946
948-974
982-1002
1004-1028
1018-1045
1046-1073
1175-1202
1292-1318
1322-1347
1437-1466
1518-1545
1821-1847
1850-1876
3460-3486
3488-3515
3516-3543
3544-3571
3558-3585
3677-3703
3707-3721
3808-3835
3836-3860
PaGL#33_00931121-146
149-176
179-204
207-232
235-260
261-288
PaGL#33_047020-21
22-49
89-111
Variovorax paradoxus, 2u118 PaGL#32_06153102-127
132-151
164-189
190-214
218-243
246-273
274-300
289-315
303-329
344-371
358-385
479-501
502-529
516-537
551-572
576-602
629-654
657-681
685-710
728-750
756-780
876-901
890-915
904-931
922-943
932-957
946-973
960-987
974-1001
1214-1243
1513-1540
1541-1565
1598-1622
1609-1626
1751-1778
1765-1792
1896-1923
2135-2162
2169-2192
PaGL#32_03700458-476
463-490
477-504
510-532
533-559
Variovorax paradoxus, SPNA7 PaGL#43_0024677-95
101-125
394-417
424-447
633-654
655-679
683-710
814-837
824-849
860-886
1053-1080
1316-1341
1342-1366
1534-1559
1562-1589
1680-1707
1708-1735
PaGL#43_06086105-128
161-187
179-199
189-215
233-259
260-286
288-315
406-431
418-444
446-467
478-505
506-532
559-584
587-611
615-640
658-680
686-710
820-845
834-861
852-873
876-903
904-931
1144-1173
1413-1440
1427-1454
1695-1722
1723-1747
1780-1804
1933-1960
1947-1974
2078-2105
2316-2343
2364-2386
PaGL#43_06490140-164
246-269
270-294
520-546
597-622
803-828
1044-1071
1265-1292
1307-1334
1321-1348
1335-1362
1547-1574
1817-1840
1847-1870
1858-1882
2277-2304
2305-2329
2324-2345
3830-3857
3844-3871
3873-3899
PaGL#43_03741185-198
483-501
502-529
535-557
558-584
Sphingomonas sp., CR2A3 PaGL#62_02810166-192
179-206
207-233
270-292
280-307
370-394
398-425
426-450
454-479
522-549
646-672
685-703
698-719
765-791
811-838
1067-1092
1081-1104
1109-1137
1345-1372
1359-1386
1388-1414
1628-1655
1793-1820
1811-1834
1923-1950
1957-1980
1982-2008

PF05658:YadA_head. YadA head domain repeat (2 copies)

Found 199 similar signatures
Methylobacterium radiotolerans, GTSA1 PaGL#34_03098253-280
267-293
283-307
295-319
323-350
Variovorax sp., EBFNA2 PaGL#33_06768146-173
160-186
174-198
188-215
202-229
448-471
472-496
702-725
759-779
813-832
822-849
836-863
850-877
864-889
878-905
907-933
922-946
948-974
982-1002
1004-1028
1018-1045
1046-1073
1175-1202
1292-1318
1322-1347
1437-1466
1518-1545
1821-1847
1850-1876
3460-3486
3488-3515
3516-3543
3544-3571
3558-3585
3677-3703
3707-3721
3808-3835
3836-3860
PaGL#33_00931121-146
149-176
179-204
207-232
235-260
261-288
PaGL#33_047020-21
22-49
89-111
Variovorax paradoxus, 2u118 PaGL#32_06153102-127
132-151
164-189
190-214
218-243
246-273
274-300
289-315
303-329
344-371
358-385
479-501
502-529
516-537
551-572
576-602
629-654
657-681
685-710
728-750
756-780
876-901
890-915
904-931
922-943
932-957
946-973
960-987
974-1001
1214-1243
1513-1540
1541-1565
1598-1622
1609-1626
1751-1778
1765-1792
1896-1923
2135-2162
2169-2192
PaGL#32_03700458-476
463-490
477-504
510-532
533-559
Variovorax paradoxus, SPNA7 PaGL#43_0024677-95
101-125
394-417
424-447
633-654
655-679
683-710
814-837
824-849
860-886
1053-1080
1316-1341
1342-1366
1534-1559
1562-1589
1680-1707
1708-1735
PaGL#43_06086105-128
161-187
179-199
189-215
233-259
260-286
288-315
406-431
418-444
446-467
478-505
506-532
559-584
587-611
615-640
658-680
686-710
820-845
834-861
852-873
876-903
904-931
1144-1173
1413-1440
1427-1454
1695-1722
1723-1747
1780-1804
1933-1960
1947-1974
2078-2105
2316-2343
2364-2386
PaGL#43_06490140-164
246-269
270-294
520-546
597-622
803-828
1044-1071
1265-1292
1307-1334
1321-1348
1335-1362
1547-1574
1817-1840
1847-1870
1858-1882
2277-2304
2305-2329
2324-2345
3830-3857
3844-3871
3873-3899
PaGL#43_03741185-198
483-501
502-529
535-557
558-584
Sphingomonas sp., CR2A3 PaGL#62_02810166-192
179-206
207-233
270-292
280-307
370-394
398-425
426-450
454-479
522-549
646-672
685-703
698-719
765-791
811-838
1067-1092
1081-1104
1109-1137
1345-1372
1359-1386
1388-1414
1628-1655
1793-1820
1811-1834
1923-1950
1957-1980
1982-2008

PF05658:YadA_head. YadA head domain repeat (2 copies)

Found 199 similar signatures
Methylobacterium radiotolerans, GTSA1 PaGL#34_03098253-280
267-293
283-307
295-319
323-350
Variovorax sp., EBFNA2 PaGL#33_06768146-173
160-186
174-198
188-215
202-229
448-471
472-496
702-725
759-779
813-832
822-849
836-863
850-877
864-889
878-905
907-933
922-946
948-974
982-1002
1004-1028
1018-1045
1046-1073
1175-1202
1292-1318
1322-1347
1437-1466
1518-1545
1821-1847
1850-1876
3460-3486
3488-3515
3516-3543
3544-3571
3558-3585
3677-3703
3707-3721
3808-3835
3836-3860
PaGL#33_00931121-146
149-176
179-204
207-232
235-260
261-288
PaGL#33_047020-21
22-49
89-111
Variovorax paradoxus, 2u118 PaGL#32_06153102-127
132-151
164-189
190-214
218-243
246-273
274-300
289-315
303-329
344-371
358-385
479-501
502-529
516-537
551-572
576-602
629-654
657-681
685-710
728-750
756-780
876-901
890-915
904-931
922-943
932-957
946-973
960-987
974-1001
1214-1243
1513-1540
1541-1565
1598-1622
1609-1626
1751-1778
1765-1792
1896-1923
2135-2162
2169-2192
PaGL#32_03700458-476
463-490
477-504
510-532
533-559
Variovorax paradoxus, SPNA7 PaGL#43_0024677-95
101-125
394-417
424-447
633-654
655-679
683-710
814-837
824-849
860-886
1053-1080
1316-1341
1342-1366
1534-1559
1562-1589
1680-1707
1708-1735
PaGL#43_06086105-128
161-187
179-199
189-215
233-259
260-286
288-315
406-431
418-444
446-467
478-505
506-532
559-584
587-611
615-640
658-680
686-710
820-845
834-861
852-873
876-903
904-931
1144-1173
1413-1440
1427-1454
1695-1722
1723-1747
1780-1804
1933-1960
1947-1974
2078-2105
2316-2343
2364-2386
PaGL#43_06490140-164
246-269
270-294
520-546
597-622
803-828
1044-1071
1265-1292
1307-1334
1321-1348
1335-1362
1547-1574
1817-1840
1847-1870
1858-1882
2277-2304
2305-2329
2324-2345
3830-3857
3844-3871
3873-3899
PaGL#43_03741185-198
483-501
502-529
535-557
558-584
Sphingomonas sp., CR2A3 PaGL#62_02810166-192
179-206
207-233
270-292
280-307
370-394
398-425
426-450
454-479
522-549
646-672
685-703
698-719
765-791
811-838
1067-1092
1081-1104
1109-1137
1345-1372
1359-1386
1388-1414
1628-1655
1793-1820
1811-1834
1923-1950
1957-1980
1982-2008

PF05662:YadA_stalk. Coiled stalk of trimeric autotransporter adhesin

Found 76 similar signatures
Variovorax sp., EBFNA2 PaGL#33_06768579-618
1123-1165
1393-1418
1645-1670
1916-1957
3415-3454
3630-3662
3755-3791
3898-3939
3953-3992
PaGL#33_00931323-362
378-409
PaGL#33_04702156-196
214-245
Variovorax paradoxus, 2u118 PaGL#32_06153818-853
1039-1075
1167-1206
1310-1348
1438-1476
1692-1734
1830-1875
1961-2002
2090-2131
2265-2299
2327-2364
PaGL#32_03700256-295
566-603
Variovorax paradoxus, SPNA7 PaGL#43_00246563-599
1002-1044
1469-1513
1627-1661
1770-1811
1826-1863
PaGL#43_06086748-783
969-1005
1097-1136
1241-1276
1368-1408
1492-1529
1620-1659
1874-1916
2012-2057
2143-2184
2271-2295
2446-2480
2508-2545
PaGL#43_06490416-460
940-984
1400-1444
1969-2013
2126-2166
2229-2269
2477-2521
2632-2672
2753-2794
2896-2937
3030-3071
3177-3217
3309-3350
3462-3502
3592-3633
3787-3823
3933-3974
PaGL#43_03741256-295
591-628
Sphingomonas sp., CR2A3 PaGL#62_02810587-631
950-991
1175-1213
1297-1337
1461-1504
1535-1577
1693-1738
1878-1919
2042-2080
2248-2281
2302-2339

PF05662:YadA_stalk. Coiled stalk of trimeric autotransporter adhesin

Found 76 similar signatures
Variovorax sp., EBFNA2 PaGL#33_06768579-618
1123-1165
1393-1418
1645-1670
1916-1957
3415-3454
3630-3662
3755-3791
3898-3939
3953-3992
PaGL#33_00931323-362
378-409
PaGL#33_04702156-196
214-245
Variovorax paradoxus, 2u118 PaGL#32_06153818-853
1039-1075
1167-1206
1310-1348
1438-1476
1692-1734
1830-1875
1961-2002
2090-2131
2265-2299
2327-2364
PaGL#32_03700256-295
566-603
Variovorax paradoxus, SPNA7 PaGL#43_00246563-599
1002-1044
1469-1513
1627-1661
1770-1811
1826-1863
PaGL#43_06086748-783
969-1005
1097-1136
1241-1276
1368-1408
1492-1529
1620-1659
1874-1916
2012-2057
2143-2184
2271-2295
2446-2480
2508-2545
PaGL#43_06490416-460
940-984
1400-1444
1969-2013
2126-2166
2229-2269
2477-2521
2632-2672
2753-2794
2896-2937
3030-3071
3177-3217
3309-3350
3462-3502
3592-3633
3787-3823
3933-3974
PaGL#43_03741256-295
591-628
Sphingomonas sp., CR2A3 PaGL#62_02810587-631
950-991
1175-1213
1297-1337
1461-1504
1535-1577
1693-1738
1878-1919
2042-2080
2248-2281
2302-2339

PF03895:YadA_anchor. YadA-like membrane anchor domain

Found 7 similar signatures
Variovorax sp., EBFNA2 PaGL#33_00931428-489
PaGL#33_0143462-118
PaGL#33_04702267-322
Variovorax paradoxus, 2u118 PaGL#32_061532388-2449
Variovorax paradoxus, SPNA7 PaGL#43_060862569-2630
Methylorubrum populi, CTY4 PaGL#39_03467123-180
Sphingomonas sp., CR2A3 PaGL#62_028102366-2427
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