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PaGL#32_05729 Locus tags: • Sequence Length: 626

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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PaGL#32_00429 PaGL#32_05728 PaGL#32_00431 PaGL#32_05729 PaGL#32_00432 PaGL#32_00433 PaGL#32_05731 PaGL#32_00434 
    [SP]_[PF13360]_[PF01011]_[TM]

    [SP]_[67:PF13360]_[497:PF01011]_[TM]

    [SP]_[31:IPR034119]_[32:IPR011047]_[67:IPR002372]_[84:IPR018391]_[132:IPR018391]_[178:IPR018391]_[282:IPR018391]_[439:IPR018391]_[490:IPR018391]_[497:IPR002372]_[TM]

Looking for similar signatures in the working genomes

PF13360:PQQ_2. PQQ-like domain

Found 136 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060629:NJMEOJLD_00873436-573
2510062074:NJMEOJLD_02282472-564
2510062631:NJMEOJLD_0282956-186
242-360
397-424
2510062858:NJMEOJLD_03047573-666
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945885.1:NEIHKHHH_02898201-330
WP_050753837.1:NEIHKHHH_05248100-257
340-381
Ruminococcus albus_7, DSM 20455 WP_013499579.1:HCIAFFOI_0309456-142
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0017773-125
171-372
GJLLLGJL_01825268-391
Paenibacillus guangzhouensis, KCTC 33171 WP_152391622.1:KDFAKKPF_0000877-194
WP_193726686.1:KDFAKKPF_06120126-319
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698178.1:PROKKA_00879512-604
FD_25_22, AnGL7 AnGL7_0102678-319
FD_25_27, AnGL8 AnGL8_02775103-311
FD_MS_7_1, AnGL28 AnGL28_03240305-537
FD_SO4_37_1, AnGL2 AnGL2_02370305-537
FD_YE_25_21, AnGL21 AnGL21_0060575-293
293-357
FD_YE_37_3, AnGL26 AnGL26_0025085-331
AnGL26_01949283-406
416-492
AnGL26_0366350-197
AnGL26_0366482-326
AnGL26_03665100-246
AnGL26_03670287-442
469-597
AnGL26_0367477-295
334-366
AnGL26_03950478-702
730-825
FD_YE_37_9_2, AnGL4 AnGL4_03093179-404
Syntrophomonas curvata, Scurva Scurva_0236673-219
260-375
Syntrophomonas wolfei methylbutyratica, Swm Swm_0014496-204
356-393
Swm_00162106-158
204-340
Swm_02053331-444
FD-25-21, AnGL21 AnGL21_0152578-319
Sunxiuqinia elliptica, AnGL22 AnGL22_0025185-331
AnGL22_01946283-406
416-492
AnGL22_0365850-197
AnGL22_0365982-326
AnGL22_03660100-246
AnGL22_03665287-442
469-597
AnGL22_0366977-295
334-366
AnGL22_03946478-702
730-825
FD-YE-37-9-3, AnGL29 AnGL29_00351179-404
Methylobacterium radiotolerans, GTSA1 PaGL#34_0067662-214
481-522
PaGL#34_0098270-245
477-567
PaGL#34_01781238-472
689-780
PaGL#34_0216988-224
PaGL#34_0266973-228
PaGL#34_04654104-225
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0479380-233
616-711
PaGL#35_05051180-342
351-449
PaGL#35_05227317-456
467-593
Variovorax sp., EBFNA2 PaGL#33_0610964-307
PaGL#33_0611141-183
PaGL#33_01962122-249
PaGL#33_0369977-305
PaGL#33_0574889-241
489-572
PaGL#33_05755238-337
Variovorax paradoxus, 2u118 PaGL#32_00371234-290
PaGL#32_0572967-308
PaGL#32_0219977-305
PaGL#32_0313570-234
PaGL#32_0500778-226
Dietzia cinnamea, 55 PaGL#56_01877243-318
Maridesulfovibrio salexigens, AnGL23 AnGL23_0073031-161
228-379
AnGL23_0378779-116
134-209
215-338
Priestia megaterium, 10L1 PaGL#57_01179101-266
Variovorax paradoxus, SPNA7 PaGL#43_0573867-308
PaGL#43_06355117-246
PaGL#43_0245877-305
PaGL#43_0318869-234
PaGL#43_0520579-226
Methanospirillum lacunae, Ki8-1 MLKi8_0268192-202
435-502
MLKi8_03262555-686
700-800
832-868
Geodermatophilus sp., RDM14 PaGL#36_0109386-380
PaGL#36_01180148-271
PaGL#36_0356457-184
213-359
Methylorubrum populi, CTY4 PaGL#39_0160763-212
PaGL#39_0372495-218
PaGL#39_04023105-225
PaGL#39_0425272-227
PaGL#39_0442095-269
505-593
Methanospirillum stamsii, Pt1 MLKi8_020867-45
45-85
114-219
MLKi8_02207440-474
544-726
Bacillus subtilis, 30VD-1 PaGL#66_0031181-271
Micromonospora inositola, Utrum1 PaGL#61_00249173-438
PaGL#61_01899172-311
PaGL#61_01900132-277
PaGL#61_05853593-815
PaGL#61_06084242-367
PaGL#61_06742222-407
PaGL#61_0674858-241
Sphingomonas sp., CR2A3 PaGL#62_00350689-775
PaGL#62_03539121-360
379-440
MPOB, Sfum 640069113:Sfum_0053752-89
122-224
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02275248-378
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0017773-125
171-372
Swol_01825268-391
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02078301-389
Mucilaginibacter gossypii, cycad 4 PaGL#42_01859625-711
PaGL#42_0241360-233
618-713

PF01011:PQQ. PQQ enzyme repeat

Found 37 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510062631:NJMEOJLD_02829201-234
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698177.1:PROKKA_00880505-535
Methylobacterium radiotolerans, GTSA1 PaGL#34_02169494-528
PaGL#34_02669500-537
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05051131-159
Variovorax sp., EBFNA2 PaGL#33_06109495-531
PaGL#33_01962317-344
539-575
PaGL#33_05755468-497
690-725
Variovorax paradoxus, 2u118 PaGL#32_05729497-533
PaGL#32_05007509-545
PaGL#32_05009238-264
466-495
688-723
744-779
Maridesulfovibrio salexigens, AnGL23 AnGL23_00730178-213
Variovorax paradoxus, SPNA7 PaGL#43_05738497-533
PaGL#43_06355313-341
536-572
PaGL#43_05205509-545
PaGL#43_05207238-264
466-495
688-723
744-780
Methylorubrum populi, CTY4 PaGL#39_01607502-534
PaGL#39_03724501-533
PaGL#39_04023512-547
PaGL#39_04252498-535
Methanospirillum stamsii, Pt1 MLKi8_02086233-264
MLKi8_02207496-533
Bacillus subtilis, 30VD-1 PaGL#66_00311274-310
354-390
Sphingomonas sp., CR2A3 PaGL#62_00350455-483
Mucilaginibacter gossypii, cycad 4 PaGL#42_0185991-118
295-323
PaGL#42_02413299-325
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