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Swm_00162 Locus tags: • Sequence Length: 936

Syntrophomonas wolfei methylbutyratica, Swm Batch1_genome_fasta/SM1

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850900900950950
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Swm_00160 Swm_00161 Swm_00162 Swm_00164 Swm_00165 Swm_00166 Swm_00167 
    [PF13360]_[PF13360]_[PF13290]_[PF13753]_[TM]

    [106:PF13360]_[204:PF13360]_[488:PF13290]_[692:PF13753]_[TM]

    [74:IPR011047]_[106:IPR002372]_[120:IPR018391]_[185:IPR018391]_[204:IPR002372]_[231:IPR018391]_[274:IPR018391]_[357:IPR018391]_[399:IPR018391]_[692:IPR028059]_[TM]

Looking for similar signatures in the working genomes

PF13360:PQQ_2. PQQ-like domain

Found 136 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060629:NJMEOJLD_00873436-573
2510062074:NJMEOJLD_02282472-564
2510062631:NJMEOJLD_0282956-186
242-360
397-424
2510062858:NJMEOJLD_03047573-666
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945885.1:NEIHKHHH_02898201-330
WP_050753837.1:NEIHKHHH_05248100-257
340-381
Ruminococcus albus_7, DSM 20455 WP_013499579.1:HCIAFFOI_0309456-142
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0017773-125
171-372
GJLLLGJL_01825268-391
Paenibacillus guangzhouensis, KCTC 33171 WP_152391622.1:KDFAKKPF_0000877-194
WP_193726686.1:KDFAKKPF_06120126-319
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698178.1:PROKKA_00879512-604
FD_25_22, AnGL7 AnGL7_0102678-319
FD_25_27, AnGL8 AnGL8_02775103-311
FD_MS_7_1, AnGL28 AnGL28_03240305-537
FD_SO4_37_1, AnGL2 AnGL2_02370305-537
FD_YE_25_21, AnGL21 AnGL21_0060575-293
293-357
FD_YE_37_3, AnGL26 AnGL26_0025085-331
AnGL26_01949283-406
416-492
AnGL26_0366350-197
AnGL26_0366482-326
AnGL26_03665100-246
AnGL26_03670287-442
469-597
AnGL26_0367477-295
334-366
AnGL26_03950478-702
730-825
FD_YE_37_9_2, AnGL4 AnGL4_03093179-404
Syntrophomonas curvata, Scurva Scurva_0236673-219
260-375
Syntrophomonas wolfei methylbutyratica, Swm Swm_0014496-204
356-393
Swm_00162106-158
204-340
Swm_02053331-444
FD-25-21, AnGL21 AnGL21_0152578-319
Sunxiuqinia elliptica, AnGL22 AnGL22_0025185-331
AnGL22_01946283-406
416-492
AnGL22_0365850-197
AnGL22_0365982-326
AnGL22_03660100-246
AnGL22_03665287-442
469-597
AnGL22_0366977-295
334-366
AnGL22_03946478-702
730-825
FD-YE-37-9-3, AnGL29 AnGL29_00351179-404
Methylobacterium radiotolerans, GTSA1 PaGL#34_0067662-214
481-522
PaGL#34_0098270-245
477-567
PaGL#34_01781238-472
689-780
PaGL#34_0216988-224
PaGL#34_0266973-228
PaGL#34_04654104-225
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0479380-233
616-711
PaGL#35_05051180-342
351-449
PaGL#35_05227317-456
467-593
Variovorax sp., EBFNA2 PaGL#33_0610964-307
PaGL#33_0611141-183
PaGL#33_01962122-249
PaGL#33_0369977-305
PaGL#33_0574889-241
489-572
PaGL#33_05755238-337
Variovorax paradoxus, 2u118 PaGL#32_00371234-290
PaGL#32_0572967-308
PaGL#32_0219977-305
PaGL#32_0313570-234
PaGL#32_0500778-226
Dietzia cinnamea, 55 PaGL#56_01877243-318
Maridesulfovibrio salexigens, AnGL23 AnGL23_0073031-161
228-379
AnGL23_0378779-116
134-209
215-338
Priestia megaterium, 10L1 PaGL#57_01179101-266
Variovorax paradoxus, SPNA7 PaGL#43_0573867-308
PaGL#43_06355117-246
PaGL#43_0245877-305
PaGL#43_0318869-234
PaGL#43_0520579-226
Methanospirillum lacunae, Ki8-1 MLKi8_0268192-202
435-502
MLKi8_03262555-686
700-800
832-868
Geodermatophilus sp., RDM14 PaGL#36_0109386-380
PaGL#36_01180148-271
PaGL#36_0356457-184
213-359
Methylorubrum populi, CTY4 PaGL#39_0160763-212
PaGL#39_0372495-218
PaGL#39_04023105-225
PaGL#39_0425272-227
PaGL#39_0442095-269
505-593
Methanospirillum stamsii, Pt1 MLKi8_020867-45
45-85
114-219
MLKi8_02207440-474
544-726
Bacillus subtilis, 30VD-1 PaGL#66_0031181-271
Micromonospora inositola, Utrum1 PaGL#61_00249173-438
PaGL#61_01899172-311
PaGL#61_01900132-277
PaGL#61_05853593-815
PaGL#61_06084242-367
PaGL#61_06742222-407
PaGL#61_0674858-241
Sphingomonas sp., CR2A3 PaGL#62_00350689-775
PaGL#62_03539121-360
379-440
MPOB, Sfum 640069113:Sfum_0053752-89
122-224
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02275248-378
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0017773-125
171-372
Swol_01825268-391
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02078301-389
Mucilaginibacter gossypii, cycad 4 PaGL#42_01859625-711
PaGL#42_0241360-233
618-713

PF13360:PQQ_2. PQQ-like domain

Found 136 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060629:NJMEOJLD_00873436-573
2510062074:NJMEOJLD_02282472-564
2510062631:NJMEOJLD_0282956-186
242-360
397-424
2510062858:NJMEOJLD_03047573-666
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945885.1:NEIHKHHH_02898201-330
WP_050753837.1:NEIHKHHH_05248100-257
340-381
Ruminococcus albus_7, DSM 20455 WP_013499579.1:HCIAFFOI_0309456-142
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0017773-125
171-372
GJLLLGJL_01825268-391
Paenibacillus guangzhouensis, KCTC 33171 WP_152391622.1:KDFAKKPF_0000877-194
WP_193726686.1:KDFAKKPF_06120126-319
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698178.1:PROKKA_00879512-604
FD_25_22, AnGL7 AnGL7_0102678-319
FD_25_27, AnGL8 AnGL8_02775103-311
FD_MS_7_1, AnGL28 AnGL28_03240305-537
FD_SO4_37_1, AnGL2 AnGL2_02370305-537
FD_YE_25_21, AnGL21 AnGL21_0060575-293
293-357
FD_YE_37_3, AnGL26 AnGL26_0025085-331
AnGL26_01949283-406
416-492
AnGL26_0366350-197
AnGL26_0366482-326
AnGL26_03665100-246
AnGL26_03670287-442
469-597
AnGL26_0367477-295
334-366
AnGL26_03950478-702
730-825
FD_YE_37_9_2, AnGL4 AnGL4_03093179-404
Syntrophomonas curvata, Scurva Scurva_0236673-219
260-375
Syntrophomonas wolfei methylbutyratica, Swm Swm_0014496-204
356-393
Swm_00162106-158
204-340
Swm_02053331-444
FD-25-21, AnGL21 AnGL21_0152578-319
Sunxiuqinia elliptica, AnGL22 AnGL22_0025185-331
AnGL22_01946283-406
416-492
AnGL22_0365850-197
AnGL22_0365982-326
AnGL22_03660100-246
AnGL22_03665287-442
469-597
AnGL22_0366977-295
334-366
AnGL22_03946478-702
730-825
FD-YE-37-9-3, AnGL29 AnGL29_00351179-404
Methylobacterium radiotolerans, GTSA1 PaGL#34_0067662-214
481-522
PaGL#34_0098270-245
477-567
PaGL#34_01781238-472
689-780
PaGL#34_0216988-224
PaGL#34_0266973-228
PaGL#34_04654104-225
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0479380-233
616-711
PaGL#35_05051180-342
351-449
PaGL#35_05227317-456
467-593
Variovorax sp., EBFNA2 PaGL#33_0610964-307
PaGL#33_0611141-183
PaGL#33_01962122-249
PaGL#33_0369977-305
PaGL#33_0574889-241
489-572
PaGL#33_05755238-337
Variovorax paradoxus, 2u118 PaGL#32_00371234-290
PaGL#32_0572967-308
PaGL#32_0219977-305
PaGL#32_0313570-234
PaGL#32_0500778-226
Dietzia cinnamea, 55 PaGL#56_01877243-318
Maridesulfovibrio salexigens, AnGL23 AnGL23_0073031-161
228-379
AnGL23_0378779-116
134-209
215-338
Priestia megaterium, 10L1 PaGL#57_01179101-266
Variovorax paradoxus, SPNA7 PaGL#43_0573867-308
PaGL#43_06355117-246
PaGL#43_0245877-305
PaGL#43_0318869-234
PaGL#43_0520579-226
Methanospirillum lacunae, Ki8-1 MLKi8_0268192-202
435-502
MLKi8_03262555-686
700-800
832-868
Geodermatophilus sp., RDM14 PaGL#36_0109386-380
PaGL#36_01180148-271
PaGL#36_0356457-184
213-359
Methylorubrum populi, CTY4 PaGL#39_0160763-212
PaGL#39_0372495-218
PaGL#39_04023105-225
PaGL#39_0425272-227
PaGL#39_0442095-269
505-593
Methanospirillum stamsii, Pt1 MLKi8_020867-45
45-85
114-219
MLKi8_02207440-474
544-726
Bacillus subtilis, 30VD-1 PaGL#66_0031181-271
Micromonospora inositola, Utrum1 PaGL#61_00249173-438
PaGL#61_01899172-311
PaGL#61_01900132-277
PaGL#61_05853593-815
PaGL#61_06084242-367
PaGL#61_06742222-407
PaGL#61_0674858-241
Sphingomonas sp., CR2A3 PaGL#62_00350689-775
PaGL#62_03539121-360
379-440
MPOB, Sfum 640069113:Sfum_0053752-89
122-224
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02275248-378
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0017773-125
171-372
Swol_01825268-391
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02078301-389
Mucilaginibacter gossypii, cycad 4 PaGL#42_01859625-711
PaGL#42_0241360-233
618-713

PF13290:CHB_HEX_C_1. Chitobiase/beta-hexosaminidase C-terminal domain

Found 110 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_013913679.1:FHOCHPCF_02290834-904
1013-1079
WP_010966174.1:FHOCHPCF_02940829-895
994-1060
Acetivibrio alkalicellulosi, DSM 17461 2510062061:NJMEOJLD_02269450-508
2510063106:NJMEOJLD_03294495-561
806-870
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946597.1:NEIHKHHH_00540124-183
WP_036943752.1:NEIHKHHH_01449848-914
Ruminococcus albus_7, DSM 20455 WP_013498679.1:HCIAFFOI_0208955-148
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00152389-456
GJLLLGJL_00177455-521
Ga0065332_11785:GJLLLGJL_007711079-1146
1425-1494
Ga0065332_111126:GJLLLGJL_0110345-110
413-479
786-853
Ga0065332_111128:GJLLLGJL_0110547-110
Ga0065332_112101:GJLLLGJL_02060774-860
Ga0065332_112102:GJLLLGJL_02061214-299
Paenibacillus guangzhouensis, KCTC 33171 WP_152392023.1:KDFAKKPF_004531142-1209
WP_152393341.1:KDFAKKPF_019761656-1713
WP_152396654.1:KDFAKKPF_0587244-104
Clostridium acetobutylicum, ATCC 824 WP_010965550.1:OJAMHIDJ_02299834-904
1013-1079
WP_010966174.1:OJAMHIDJ_02949829-895
994-1060
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695876.1:PROKKA_02185117-178
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01592213-290
OINOEOOJ_01594218-304
OINOEOOJ_01598241-324
OINOEOOJ_01601353-439
OINOEOOJ_01605353-439
FD_MS_7_1, AnGL28 AnGL28_01771821-863
AnGL28_03242458-512
FD_SO4_25_1_F22, AnGL30 AnGL30_01191544-595
AnGL30_01197556-614
AnGL30_01202541-597
AnGL30_01539726-787
FD_SO4_37_1, AnGL2 AnGL2_00900821-863
AnGL2_02372458-512
FD_YE_37_3, AnGL26 AnGL26_02765757-816
AnGL26_03930548-597
AnGL26_04052543-599
Syntrophomonas curvata, Scurva Scurva_02334523-592
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02033353-439
Sespor_02035353-439
Sespor_02038241-324
Sespor_02042218-304
Sespor_02044213-290
Syntrophomonas wolfei methylbutyratica, Swm Swm_00147388-454
Swm_00162488-554
Swm_00858981-1050
Swm_01255639-705
Swm_02370219-305
Swm_02374774-860
Swm_02375214-300
Sunxiuqinia elliptica, AnGL22 AnGL22_02762757-816
AnGL22_03926548-597
AnGL22_04048543-599
FD-MS-7-8, AnGL9 AnGL9_00972389-453
962-1023
AnGL9_0165443-76
585-647
AnGL9_01735369-428
1101-1154
AnGL9_018891011-1067
AnGL9_02655812-852
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00015283-323
PaGL#35_03070549-606
PaGL#35_05370564-613
PaGL#35_05446545-604
PaGL#35_05986762-841
Syntrophomonas erecta, GB-438 Ga0610585_01592213-290
Ga0610585_01594218-304
Ga0610585_01598241-324
Ga0610585_01601353-439
Ga0610585_01605353-439
Exiguobacterium mexicanum, AnGL24 AnGL24_00143401-465
Clostridium subterminale, CB-LS10-1 AnGL53_00218204-269
Priestia megaterium, 10L1 PaGL#57_06963341-407
Fictibacillus phosphorivorans, TY7 PaGL#38_01863163-225
Syntrophomonas wolfei, saponavida Swsap_00432445-516
619-687
704-772
791-861
880-946
965-1032
Swsap_03333215-301
Peribacillus frigoritolerans, 30N-5 PaGL#67_01022354-413
PaGL#67_03746696-765
Micromonospora inositola, Utrum1 PaGL#61_01338732-793
PaGL#61_02609734-802
Sphingomonas sp., CR2A3 PaGL#62_00391546-602
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00152389-456
Swol_00177455-521
Ga0065332_11785:Swol_007711079-1146
1425-1494
Ga0065332_111126:Swol_0110345-110
413-479
786-853
Ga0065332_111128:Swol_0110547-110
Ga0065332_112101:Swol_02060774-860
Ga0065332_112102:Swol_02061214-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_01146793-849
PaGL#42_01190502-559
PaGL#42_01754551-611
PaGL#42_03268528-590
PaGL#42_03597499-553
PaGL#42_05316777-855

PF13753:SWM_repeat. Putative flagellar system-associated repeat

Found 17 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010963385.1:FHOCHPCF_00067191-268
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00177659-735
Paenibacillus guangzhouensis, KCTC 33171 WP_152394663.1:KDFAKKPF_03502808-872
KDFAKKPF_05530390-468
493-571
596-673
698-777
Clostridium acetobutylicum, ATCC 824 WP_010963385.1:OJAMHIDJ_00067191-268
Syntrophomonas erecta, DSM 16215 OINOEOOJ_018072777-2855
Syntrophomonas curvata, Scurva Scurva_0139058-135
Syntrophomonas erecta sporosyntropha, Sespor Sespor_018302777-2855
Syntrophomonas wolfei methylbutyratica, Swm Swm_00162692-768
Syntrophomonas erecta, GB-438 Ga0610585_018072777-2855
Syntrophomonas wolfei, saponavida Swsap_01403261-339
Swsap_019782486-2564
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00554788-870
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00177659-735
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