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Swm_01255 Locus tags: • Sequence Length: 1589

Syntrophomonas wolfei methylbutyratica, Swm Batch1_genome_fasta/SM1

10010020020030030040040050050060060070070080080090090010001000110011001200120013001300140014001500150016001600
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Swm_01252 Swm_01254 Swm_01255 Swm_01257 Swm_01259 
    [PF20578]_[PF13290]_[PF07581]_[PF07581]_[PF07581]_[PF02368]_[TM]

    [535:PF20578]_[639:PF13290]_[816:PF07581]_[845:PF07581]_[870:PF07581]_[1430:PF02368]_[TM]

    [535:IPR046780]_[816:IPR011493]_[845:IPR011493]_[870:IPR011493]_[1427:IPR008964]_[1429:IPR003343]_[1430:IPR003343]_[TM]

Looking for similar signatures in the working genomes

PF20578:aBig_2. Atrophied bacterial Ig domain

Found 25 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510062987:NJMEOJLD_03173380-466
731-820
830-918
926-1014
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945573.1:NEIHKHHH_05450144-232
1092-1179
1436-1527
Paenibacillus guangzhouensis, KCTC 33171 WP_152397078.1:KDFAKKPF_00816558-632
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696100.1:PROKKA_01943252-335
346-438
Syntrophomonas erecta, DSM 16215 OINOEOOJ_000661672-1722
FD_YE_37_8_2, AnGL3 AnGL3_01962268-343
350-435
Syntrophomonas erecta sporosyntropha, Sespor Sespor_009401672-1722
Syntrophomonas wolfei methylbutyratica, Swm Swm_01255535-627
Syntrophomonas erecta, GB-438 Ga0610585_000661672-1722
Syntrophomonas wolfei, saponavida Swsap_001911509-1610
Swsap_0147938-126
136-224
Niallia taxi, AG-1 PaGL#37_00172552-633
PaGL#37_04227261-328
PaGL#37_00552495-576
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0285916-106
Ga0128340_11875:Spalm_02384536-633
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_109135:Szehn_007061156-1216

PF13290:CHB_HEX_C_1. Chitobiase/beta-hexosaminidase C-terminal domain

Found 110 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_013913679.1:FHOCHPCF_02290834-904
1013-1079
WP_010966174.1:FHOCHPCF_02940829-895
994-1060
Acetivibrio alkalicellulosi, DSM 17461 2510062061:NJMEOJLD_02269450-508
2510063106:NJMEOJLD_03294495-561
806-870
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946597.1:NEIHKHHH_00540124-183
WP_036943752.1:NEIHKHHH_01449848-914
Ruminococcus albus_7, DSM 20455 WP_013498679.1:HCIAFFOI_0208955-148
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00152389-456
GJLLLGJL_00177455-521
Ga0065332_11785:GJLLLGJL_007711079-1146
1425-1494
Ga0065332_111126:GJLLLGJL_0110345-110
413-479
786-853
Ga0065332_111128:GJLLLGJL_0110547-110
Ga0065332_112101:GJLLLGJL_02060774-860
Ga0065332_112102:GJLLLGJL_02061214-299
Paenibacillus guangzhouensis, KCTC 33171 WP_152392023.1:KDFAKKPF_004531142-1209
WP_152393341.1:KDFAKKPF_019761656-1713
WP_152396654.1:KDFAKKPF_0587244-104
Clostridium acetobutylicum, ATCC 824 WP_010965550.1:OJAMHIDJ_02299834-904
1013-1079
WP_010966174.1:OJAMHIDJ_02949829-895
994-1060
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695876.1:PROKKA_02185117-178
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01592213-290
OINOEOOJ_01594218-304
OINOEOOJ_01598241-324
OINOEOOJ_01601353-439
OINOEOOJ_01605353-439
FD_MS_7_1, AnGL28 AnGL28_01771821-863
AnGL28_03242458-512
FD_SO4_25_1_F22, AnGL30 AnGL30_01191544-595
AnGL30_01197556-614
AnGL30_01202541-597
AnGL30_01539726-787
FD_SO4_37_1, AnGL2 AnGL2_00900821-863
AnGL2_02372458-512
FD_YE_37_3, AnGL26 AnGL26_02765757-816
AnGL26_03930548-597
AnGL26_04052543-599
Syntrophomonas curvata, Scurva Scurva_02334523-592
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02033353-439
Sespor_02035353-439
Sespor_02038241-324
Sespor_02042218-304
Sespor_02044213-290
Syntrophomonas wolfei methylbutyratica, Swm Swm_00147388-454
Swm_00162488-554
Swm_00858981-1050
Swm_01255639-705
Swm_02370219-305
Swm_02374774-860
Swm_02375214-300
Sunxiuqinia elliptica, AnGL22 AnGL22_02762757-816
AnGL22_03926548-597
AnGL22_04048543-599
FD-MS-7-8, AnGL9 AnGL9_00972389-453
962-1023
AnGL9_0165443-76
585-647
AnGL9_01735369-428
1101-1154
AnGL9_018891011-1067
AnGL9_02655812-852
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00015283-323
PaGL#35_03070549-606
PaGL#35_05370564-613
PaGL#35_05446545-604
PaGL#35_05986762-841
Syntrophomonas erecta, GB-438 Ga0610585_01592213-290
Ga0610585_01594218-304
Ga0610585_01598241-324
Ga0610585_01601353-439
Ga0610585_01605353-439
Exiguobacterium mexicanum, AnGL24 AnGL24_00143401-465
Clostridium subterminale, CB-LS10-1 AnGL53_00218204-269
Priestia megaterium, 10L1 PaGL#57_06963341-407
Fictibacillus phosphorivorans, TY7 PaGL#38_01863163-225
Syntrophomonas wolfei, saponavida Swsap_00432445-516
619-687
704-772
791-861
880-946
965-1032
Swsap_03333215-301
Peribacillus frigoritolerans, 30N-5 PaGL#67_01022354-413
PaGL#67_03746696-765
Micromonospora inositola, Utrum1 PaGL#61_01338732-793
PaGL#61_02609734-802
Sphingomonas sp., CR2A3 PaGL#62_00391546-602
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00152389-456
Swol_00177455-521
Ga0065332_11785:Swol_007711079-1146
1425-1494
Ga0065332_111126:Swol_0110345-110
413-479
786-853
Ga0065332_111128:Swol_0110547-110
Ga0065332_112101:Swol_02060774-860
Ga0065332_112102:Swol_02061214-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_01146793-849
PaGL#42_01190502-559
PaGL#42_01754551-611
PaGL#42_03268528-590
PaGL#42_03597499-553
PaGL#42_05316777-855

PF07581:Glug. The GLUG motif

Found 74 similar signatures
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111126:GJLLLGJL_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:GJLLLGJL_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
FD_YE_37_8_2, AnGL3 AnGL3_03522498-525
863-890
1224-1251
1252-1280
1281-1308
AnGL3_03523553-581
585-609
887-914
1250-1277
1976-2004
AnGL3_03526137-165
167-193
527-555
555-583
AnGL3_03529278-305
313-340
679-707
709-736
738-765
797-821
1216-1241
1243-1271
1359-1387
1391-1416
1420-1445
AnGL3_03530135-162
194-218
222-243
251-271
279-303
579-604
608-632
634-661
664-689
FD_YE_37_9_2, AnGL4 AnGL4_01143482-508
552-577
606-633
Syntrophomonas curvata, Scurva Scurva_00145153-177
186-209
Syntrophomonas wolfei methylbutyratica, Swm Swm_01255816-841
845-870
870-896
FD-YE-37-9-3, AnGL29 AnGL29_01868482-508
552-577
606-633
Maridesulfovibrio salexigens, AnGL23 AnGL23_01127615-645
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384828-856
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111126:Swol_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:Swol_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13310:Szehn_020391158-1185
Szehn_01110626-654
701-725

PF07581:Glug. The GLUG motif

Found 74 similar signatures
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111126:GJLLLGJL_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:GJLLLGJL_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
FD_YE_37_8_2, AnGL3 AnGL3_03522498-525
863-890
1224-1251
1252-1280
1281-1308
AnGL3_03523553-581
585-609
887-914
1250-1277
1976-2004
AnGL3_03526137-165
167-193
527-555
555-583
AnGL3_03529278-305
313-340
679-707
709-736
738-765
797-821
1216-1241
1243-1271
1359-1387
1391-1416
1420-1445
AnGL3_03530135-162
194-218
222-243
251-271
279-303
579-604
608-632
634-661
664-689
FD_YE_37_9_2, AnGL4 AnGL4_01143482-508
552-577
606-633
Syntrophomonas curvata, Scurva Scurva_00145153-177
186-209
Syntrophomonas wolfei methylbutyratica, Swm Swm_01255816-841
845-870
870-896
FD-YE-37-9-3, AnGL29 AnGL29_01868482-508
552-577
606-633
Maridesulfovibrio salexigens, AnGL23 AnGL23_01127615-645
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384828-856
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111126:Swol_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:Swol_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13310:Szehn_020391158-1185
Szehn_01110626-654
701-725

PF07581:Glug. The GLUG motif

Found 74 similar signatures
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111126:GJLLLGJL_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:GJLLLGJL_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
FD_YE_37_8_2, AnGL3 AnGL3_03522498-525
863-890
1224-1251
1252-1280
1281-1308
AnGL3_03523553-581
585-609
887-914
1250-1277
1976-2004
AnGL3_03526137-165
167-193
527-555
555-583
AnGL3_03529278-305
313-340
679-707
709-736
738-765
797-821
1216-1241
1243-1271
1359-1387
1391-1416
1420-1445
AnGL3_03530135-162
194-218
222-243
251-271
279-303
579-604
608-632
634-661
664-689
FD_YE_37_9_2, AnGL4 AnGL4_01143482-508
552-577
606-633
Syntrophomonas curvata, Scurva Scurva_00145153-177
186-209
Syntrophomonas wolfei methylbutyratica, Swm Swm_01255816-841
845-870
870-896
FD-YE-37-9-3, AnGL29 AnGL29_01868482-508
552-577
606-633
Maridesulfovibrio salexigens, AnGL23 AnGL23_01127615-645
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384828-856
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111126:Swol_01103226-249
250-277
277-304
620-646
966-992
Ga0065332_111128:Swol_01105253-277
277-304
330-357
357-383
657-683
685-709
711-736
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13310:Szehn_020391158-1185
Szehn_01110626-654
701-725

PF02368:Big_2. Bacterial Ig-like domain (group 2)

Found 265 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518399.1:LOMAGDGF_022473780-3845
3867-3938
3945-4013
4031-4100
4115-4186
4201-4275
4286-4355
Clostridium acetobutylicum, DSM 1731 WP_010966829.1:FHOCHPCF_03618372-439
WP_010890688.1:FHOCHPCF_03802166-244
387-464
WP_043943655.1:FHOCHPCF_03803165-243
385-462
WP_010890844.1:FHOCHPCF_0396137-107
132-190
WP_010963872.1:FHOCHPCF_0059712-87
WP_010963873.1:FHOCHPCF_00598239-306
WP_010964698.1:FHOCHPCF_01442167-244
253-331
WP_013913573.1:FHOCHPCF_02147200-276
283-356
WP_010965664.1:FHOCHPCF_02399153-222
237-314
WP_010966366.1:FHOCHPCF_03131462-537
WP_010966367.1:FHOCHPCF_03132183-252
266-341
WP_010966546.1:FHOCHPCF_03325172-248
391-469
WP_010966547.1:FHOCHPCF_03326172-248
WP_010966548.1:FHOCHPCF_03327176-245
396-472
WP_010966549.1:FHOCHPCF_03328175-244
395-471
617-694
701-787
813-859
WP_010966552.1:FHOCHPCF_03331176-250
WP_013913677.1:FHOCHPCF_03332176-252
395-472
WP_010966554.1:FHOCHPCF_03333176-250
393-472
Acetivibrio alkalicellulosi, DSM 17461 2510059965:NJMEOJLD_0022751-116
140-207
246-300
391-468
472-539
2510060264:NJMEOJLD_005163857-3930
4020-4085
4135-4174
4188-4253
4273-4344
4357-4433
2510060665:NJMEOJLD_00908207-280
2510062497:NJMEOJLD_02696763-837
974-1047
1840-1914
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753624.1:NEIHKHHH_03933372-446
472-534
540-618
623-702
708-784
792-862
WP_036937631.1:NEIHKHHH_04190191-269
280-351
356-432
443-507
522-601
Ruminococcus albus_7, DSM 20455 WP_013499815.1:HCIAFFOI_03340340-411
WP_013497055.1:HCIAFFOI_003151056-1119
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11181:GJLLLGJL_00174385-461
GJLLLGJL_01068330-407
Ga0065332_111126:GJLLLGJL_011031414-1493
1500-1575
Ga0065332_111128:GJLLLGJL_01105944-1023
1030-1105
GJLLLGJL_01353222-252
Ga0065332_112100:GJLLLGJL_02059314-384
GJLLLGJL_02080395-469
Ga0065332_112329:GJLLLGJL_02282310-382
Paenibacillus guangzhouensis, KCTC 33171 WP_152391936.1:KDFAKKPF_003601123-1205
WP_152392027.1:KDFAKKPF_00457809-869
WP_152392069.1:KDFAKKPF_00505635-717
WP_227793601.1:KDFAKKPF_011661197-1276
1428-1503
WP_193726820.1:KDFAKKPF_01610795-863
870-943
1244-1312
1613-1685
WP_152393092.1:KDFAKKPF_01683350-426
436-518
WP_152393341.1:KDFAKKPF_019761723-1802
1809-1887
WP_152393582.1:KDFAKKPF_022591221-1300
WP_193726878.1:KDFAKKPF_022601038-1117
KDFAKKPF_02414225-296
WP_193726918.1:KDFAKKPF_02740661-738
WP_152394325.1:KDFAKKPF_03113936-994
WP_193726531.1:KDFAKKPF_03596587-655
WP_152395225.1:KDFAKKPF_04155129-199
WP_152395921.1:KDFAKKPF_050331449-1518
1538-1610
1632-1702
WP_152396271.1:KDFAKKPF_05429584-639
WP_193726693.1:KDFAKKPF_06204262-331
WP_193727025.1:KDFAKKPF_06301898-938
962-1025
Clostridium acetobutylicum, ATCC 824 WP_010963872.1:OJAMHIDJ_0059812-87
WP_010963873.1:OJAMHIDJ_00599239-306
WP_010964698.1:OJAMHIDJ_01446167-244
253-331
WP_010965407.1:OJAMHIDJ_02155200-276
283-356
WP_010965664.1:OJAMHIDJ_02409153-222
237-314
WP_010966366.1:OJAMHIDJ_03140462-537
WP_010966367.1:OJAMHIDJ_03141183-252
266-341
WP_010966546.1:OJAMHIDJ_03335172-248
391-469
WP_010966547.1:OJAMHIDJ_03336172-248
WP_010966548.1:OJAMHIDJ_03337176-245
396-472
WP_010966549.1:OJAMHIDJ_03338175-244
395-471
617-694
701-787
813-859
WP_010966552.1:OJAMHIDJ_03341176-250
WP_010966553.1:OJAMHIDJ_03342176-252
395-472
WP_010966554.1:OJAMHIDJ_03343176-250
393-472
WP_010966829.1:OJAMHIDJ_03630372-439
WP_010890688.1:OJAMHIDJ_03815166-244
387-464
WP_043943655.1:OJAMHIDJ_03816165-243
385-462
WP_010890844.1:OJAMHIDJ_0397437-107
132-190
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698073.1:PROKKA_0084256-102
107-173
183-254
258-328
WP_137697840.1:PROKKA_02529454-520
537-593
609-666
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00066728-802
995-1070
1097-1163
OINOEOOJ_00084343-406
OINOEOOJ_01597309-374
OINOEOOJ_02509343-409
FD_MS_7_1, AnGL28 AnGL28_008681045-1121
1131-1209
1216-1292
AnGL28_00887717-787
AnGL28_0141943-103
AnGL28_01685422-484
AnGL28_02129485-552
FD_SO4_37_1, AnGL2 AnGL2_00017717-787
AnGL2_0054843-103
AnGL2_00814422-484
AnGL2_01258485-552
AnGL2_035471045-1121
1131-1209
1216-1292
FD_YE_37_3, AnGL26 AnGL26_0053827-97
FD_YE_37_8_2, AnGL3 AnGL3_02691380-448
469-544
FD_YE_37_9_2, AnGL4 AnGL4_005471117-1185
AnGL4_00733394-451
AnGL4_01179563-628
650-716
Syntrophomonas curvata, Scurva Scurva_00271401-479
852-930
1152-1230
Scurva_00652405-478
Scurva_013905-53
Scurva_02702283-353
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00922343-406
Sespor_00940728-802
995-1070
1097-1163
Sespor_01006343-409
Sespor_02039309-374
Syntrophomonas wolfei methylbutyratica, Swm Swm_01185330-407
Swm_012551430-1509
Swm_02373332-400
Swm_02391497-576
Swm_02394389-457
Swm_02708302-379
Terrisporobacter hibernicus, AnGL54 AnGL54_03999411-486
493-567
576-645
656-724
737-805
823-887
901-977
984-1051
AnGL54_04056586-648
AnGL54_04131373-412
AnGL54_01124325-399
AnGL54_02291569-632
645-720
726-801
Sunxiuqinia elliptica, AnGL22 AnGL22_0053927-97
FD-YE-37-9-3, AnGL29 AnGL29_012721117-1185
AnGL29_01458394-451
AnGL29_01904563-628
650-716
Syntrophomonas erecta, GB-438 Ga0610585_00066728-802
995-1070
1097-1163
Ga0610585_00084343-406
Ga0610585_01597309-374
Ga0610585_02509343-409
Variovorax sp., EBFNA2 PaGL#33_0252741-121
126-198
219-289
306-395
Clostridium subterminale, CB-LS10-1 AnGL53_01281249-327
AnGL53_029421074-1151
Fictibacillus phosphorivorans, TY7 PaGL#38_00367325-404
Syntrophomonas wolfei, saponavida Swsap_02384329-404
Swsap_03336327-404
Bacillus subtilis, 30VD-1 PaGL#66_0295035-114
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00828411-486
493-567
576-645
656-724
737-805
823-887
901-977
984-1051
AnGL54_00885586-648
AnGL54_00960373-412
AnGL54_01852325-399
AnGL54_03094569-632
645-720
726-801
Niallia taxi, AG-1 PaGL#37_00654545-619
PaGL#37_02868747-812
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02684276-322
456-511
531-599
654-688
705-777
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11181:Swol_00174385-461
Swol_01068330-407
Ga0065332_111126:Swol_011031414-1493
1500-1575
Ga0065332_111128:Swol_01105944-1023
1030-1105
Swol_01353222-252
Ga0065332_112100:Swol_02059314-384
Swol_02080395-469
Ga0065332_112329:Swol_02282310-382
Mucilaginibacter gossypii, cycad 4 PaGL#42_0026542-120
PaGL#42_05708445-486
531-570
Ruminococcus callidus, ATCC 27760 Rcal_0034681-154
Rcal_00625852-895
Rcal_0173837-108
Rcal_02160827-892
1255-1329
Rcal_0276090-121
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