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MhGP1_02205 Locus tags: • Sequence Length: 483

Methanospirillum hungatei, GP1 Batch4_genome_fasta/bc2028

5050100100150150200200250250300300350350400400450450500500
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MhGP1_02201 MhGP1_02202 MhGP1_02203 MhGP1_02204 MhGP1_02205 MhGP1_02206 MhGP1_02207 MhGP1_02208 MhGP1_02209 MhGP1_02210 
    [PF01202]_[PF08501]_[PF18317]

    [11:PF01202]_[209:PF08501]_[429:PF18317]

    [3:IPR027417]_[4:IPR000623]_[11:IPR031322]_[204:IPR046346]_[209:IPR013708]_[302:IPR036291]_[429:IPR041121]

Looking for similar signatures in the working genomes

PF01202:SKI. Shikimate kinase

Found 101 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513200.1:LOMAGDGF_0007111-163
WP_003516257.1:LOMAGDGF_0153912-161
Clostridium acetobutylicum, DSM 1731 WP_010964216.1:FHOCHPCF_009458-158
Acetivibrio alkalicellulosi, DSM 17461 2510060495:NJMEOJLD_0074310-159
2510061036:NJMEOJLD_0126811-164
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936723.1:NEIHKHHH_0388012-163
WP_036936620.1:NEIHKHHH_0393211-163
Ruminococcus albus_7, DSM 20455 WP_013496895.1:HCIAFFOI_001419-148
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11551:GJLLLGJL_0053910-167
Paenibacillus guangzhouensis, KCTC 33171 WP_227793432.1:KDFAKKPF_0074414-162
WP_152393280.1:KDFAKKPF_0190110-162
Clostridium acetobutylicum, ATCC 824 WP_010964216.1:OJAMHIDJ_009488-158
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697615.1:PROKKA_0067810-163
WP_137698130.1:PROKKA_0093115-166
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0137710-166
FD_25_22, AnGL7 AnGL7_0016112-169
AnGL7_0235116-168
FD_25_27, AnGL8 AnGL8_0120815-172
AnGL8_0044410-160
FD_MS_7_1, AnGL28 AnGL28_0192312-162
AnGL28_025129-149
FD_SO4_25_1_F22, AnGL30 AnGL30_011769-166
FD_SO4_37_1, AnGL2 AnGL2_0105212-162
AnGL2_016419-149
FD_YE_25_21, AnGL21 AnGL21_0020815-172
AnGL21_0206812-165
FD_YE_37_3, AnGL26 AnGL26_015258-166
FD_YE_37_8_2, AnGL3 AnGL3_0164811-157
FD_YE_37_9_2, AnGL4 AnGL4_000999-164
AnGL4_028419-163
Syntrophus buswellii, Sbus Sbus_0119213-180
Syntrophomonas curvata, Scurva Scurva_0099110-165
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0226110-166
Syntrophomonas wolfei methylbutyratica, Swm Swm_0057210-167
Terrisporobacter hibernicus, AnGL54 AnGL54_02082269-426
FD-25-21, AnGL21 AnGL21_0245812-169
Sunxiuqinia elliptica, AnGL22 AnGL22_015278-166
Paraclostridium benzoelyticum, AnGL27 AnGL27_031699-166
FD-MS-7-8, AnGL9 AnGL9_0207713-164
AnGL9_029739-151
FD-YE-37-9-3, AnGL29 AnGL29_000999-163
AnGL29_008249-164
Methylobacterium radiotolerans, GTSA1 PaGL#34_0085032-188
PaGL#34_0409826-136
PaGL#34_04101124-281
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_064588-156
Syntrophomonas erecta, GB-438 Ga0610585_0137710-166
Variovorax sp., EBFNA2 PaGL#33_00116149-300
PaGL#33_010711-132
PaGL#33_0438118-127
Variovorax paradoxus, 2u118 PaGL#32_00092150-302
PaGL#32_0585525-132
PaGL#32_011048-165
Dietzia cinnamea, 55 PaGL#56_0166314-169
Maridesulfovibrio salexigens, AnGL23 AnGL23_0217610-167
AnGL23_0261229-182
AnGL23_0391251-172
Exiguobacterium mexicanum, AnGL24 AnGL24_0185410-153
Clostridium subterminale, CB-LS10-1 AnGL53_035679-155
AnGL53_0361310-73
Priestia megaterium, 10L1 PaGL#57_0647818-174
Variovorax paradoxus, SPNA7 PaGL#43_00091150-302
PaGL#43_0583125-132
PaGL#43_011028-165
PaGL#43_02274124-284
Methanospirillum lacunae, Ki8-1 MLKi8_006549-164
MLKi8_0232911-166
Geodermatophilus sp., RDM14 PaGL#36_0208913-172
PaGL#36_0314223-133
Methylorubrum populi, CTY4 PaGL#39_0144233-189
PaGL#39_01849125-283
Fictibacillus phosphorivorans, TY7 PaGL#38_030249-165
Methanospirillum hungatei, GP1 MhGP1_020240-77
MhGP1_020259-41
MhGP1_0202818-172
MhGP1_0220511-166
Methanospirillum stamsii, Pt1 MLKi8_0282811-166
MLKi8_036939-163
Syntrophomonas wolfei, saponavida Swsap_0044510-167
Bacillus subtilis, 30VD-1 PaGL#66_0387919-177
Peribacillus frigoritolerans, 30N-5 PaGL#67_0522618-174
Micromonospora inositola, Utrum1 PaGL#61_0246412-166
PaGL#61_0403916-124
Sphingomonas sp., CR2A3 PaGL#62_0006921-177
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02885269-426
Niallia taxi, AG-1 PaGL#37_0331234-190
Methanospirillum.hungatei GP1, MhGP1 8064047341:MhGP1_0069811-166
8064047520:MhGP1_0087518-172
8064047523:MhGP1_008789-41
8064047524:MhGP1_008790-77
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111945:Mhun_0194611-166
Ga0065338_112824:Mhun_028219-163
MPOB, Sfum 639702408:Sfum_0168912-170
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10258:Spalm_0034010-167
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11551:Swol_0053910-167
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12620:Szehn_0125610-167
Syntrophus aciditrophicus, SB 637860155:SYN_0172919-187
Syntrophus gentianae, DSM8423 Ga0074853_105125:Sgen_0094513-179
Mucilaginibacter gossypii, cycad 4 PaGL#42_059744-152
Ruminococcus callidus, ATCC 27760 Rcal_002128-161
Rcal_019029-164

PF08501:Shikimate_dh_N. Shikimate dehydrogenase substrate binding domain

Found 79 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517153.1:LOMAGDGF_0141315-98
Clostridium acetobutylicum, DSM 1731 FHOCHPCF_00944102-185
Acetivibrio alkalicellulosi, DSM 17461 2510061626:NJMEOJLD_0184315-98
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853069.1:NEIHKHHH_0199913-96
Ruminococcus albus_7, DSM 20455 WP_037305241.1:HCIAFFOI_0001923-104
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0053511-94
Paenibacillus guangzhouensis, KCTC 33171 WP_152392105.1:KDFAKKPF_0054317-100
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_00947102-185
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695945.1:PROKKA_0210415-98
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0138112-95
FD_25_22, AnGL7 AnGL7_0004025-93
AnGL7_000855-88
FD_25_27, AnGL8 AnGL8_012645-88
FD_MS_7_1, AnGL28 AnGL28_0068211-94
FD_SO4_25_1_F22, AnGL30 AnGL30_001726-89
FD_SO4_37_1, AnGL2 AnGL2_0336111-94
FD_YE_25_21, AnGL21 AnGL21_031019-92
FD_YE_37_3, AnGL26 AnGL26_038595-88
FD_YE_37_8_2, AnGL3 AnGL3_002955-87
FD_YE_37_9_2, AnGL4 AnGL4_0010016-99
Syntrophus buswellii, Sbus Sbus_0119012-93
Syntrophomonas curvata, Scurva Scurva_0098711-94
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0225712-95
Syntrophomonas wolfei methylbutyratica, Swm Swm_0056811-94
Terrisporobacter hibernicus, AnGL54 AnGL54_0208711-94
FD-25-21, AnGL21 AnGL21_025355-88
AnGL21_0258025-93
Sunxiuqinia elliptica, AnGL22 AnGL22_038555-88
Paraclostridium benzoelyticum, AnGL27 AnGL27_0317411-94
FD-MS-7-8, AnGL9 AnGL9_0099511-94
FD-YE-37-9-3, AnGL29 AnGL29_0082516-99
Methylobacterium radiotolerans, GTSA1 PaGL#34_0056818-102
PaGL#34_047309-92
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_000775-88
Syntrophomonas erecta, GB-438 Ga0610585_0138112-95
Variovorax sp., EBFNA2 PaGL#33_008565-94
PaGL#33_0235515-97
PaGL#33_0235611-94
Variovorax paradoxus, 2u118 PaGL#32_008745-94
PaGL#32_0638514-97
PaGL#32_0343112-94
PaGL#32_0343515-97
Dietzia cinnamea, 55 PaGL#56_0166516-99
Maridesulfovibrio salexigens, AnGL23 AnGL23_0326911-94
Exiguobacterium mexicanum, AnGL24 AnGL24_008764-87
Clostridium subterminale, CB-LS10-1 AnGL53_007095-88
Priestia megaterium, 10L1 PaGL#57_029666-89
PaGL#57_0645815-98
Variovorax paradoxus, SPNA7 PaGL#43_0633214-97
PaGL#43_008655-94
PaGL#43_0346912-94
PaGL#43_0347315-97
PaGL#43_049556-88
Methanospirillum lacunae, Ki8-1 MLKi8_02329212-293
Geodermatophilus sp., RDM14 PaGL#36_020864-87
PaGL#36_0266311-99
Methylorubrum populi, CTY4 PaGL#39_013386-89
Fictibacillus phosphorivorans, TY7 PaGL#38_031475-88
Methanospirillum hungatei, GP1 MhGP1_02205209-290
Methanospirillum stamsii, Pt1 MLKi8_02828209-290
Syntrophomonas wolfei, saponavida Swsap_0044811-94
Bacillus subtilis, 30VD-1 PaGL#66_017236-89
Peribacillus frigoritolerans, 30N-5 PaGL#67_021276-89
PaGL#67_0522915-98
Micromonospora inositola, Utrum1 PaGL#61_024624-87
Sphingomonas sp., CR2A3 PaGL#62_0266110-94
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0289011-94
Niallia taxi, AG-1 PaGL#37_0417817-100
PaGL#37_027585-88
Methanospirillum.hungatei GP1, MhGP1 8064047341:MhGP1_00698209-290
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111945:Mhun_01946209-290
MPOB, Sfum 639703492:Sfum_0279711-92
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10254:Spalm_0033611-94
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0053511-94
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0125410-93
Syntrophus aciditrophicus, SB 637860157:SYN_0173126-107
Syntrophus gentianae, DSM8423 Ga0074853_105127:Sgen_0094726-107
Mucilaginibacter gossypii, cycad 4 PaGL#42_042755-88
Ruminococcus callidus, ATCC 27760 Rcal_002135-86

PF18317:SDH_C. Shikimate 5'-dehydrogenase C-terminal domain

Found 45 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517153.1:LOMAGDGF_01413255-275
Acetivibrio alkalicellulosi, DSM 17461 2510061626:NJMEOJLD_01843254-277
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00535249-280
Paenibacillus guangzhouensis, KCTC 33171 WP_152392105.1:KDFAKKPF_00543252-283
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695945.1:PROKKA_02104255-279
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01381250-281
FD_25_22, AnGL7 AnGL7_00085236-267
FD_25_27, AnGL8 AnGL8_01264237-268
FD_MS_7_1, AnGL28 AnGL28_00682249-280
FD_SO4_37_1, AnGL2 AnGL2_03361249-280
FD_YE_25_21, AnGL21 AnGL21_03101240-271
Syntrophus buswellii, Sbus Sbus_01190236-267
Syntrophomonas curvata, Scurva Scurva_00987249-280
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02257250-281
Syntrophomonas wolfei methylbutyratica, Swm Swm_00568249-280
FD-25-21, AnGL21 AnGL21_02535236-267
FD-MS-7-8, AnGL9 AnGL9_00995249-280
Syntrophomonas erecta, GB-438 Ga0610585_01381250-281
Variovorax sp., EBFNA2 PaGL#33_00856247-278
Variovorax paradoxus, 2u118 PaGL#32_00874247-278
Dietzia cinnamea, 55 PaGL#56_01665249-276
Maridesulfovibrio salexigens, AnGL23 AnGL23_03269238-269
Exiguobacterium mexicanum, AnGL24 AnGL24_00876225-250
Priestia megaterium, 10L1 PaGL#57_02966242-273
PaGL#57_06458261-291
Variovorax paradoxus, SPNA7 PaGL#43_00865247-278
PaGL#43_04955238-264
Geodermatophilus sp., RDM14 PaGL#36_02086241-271
PaGL#36_02663252-280
Fictibacillus phosphorivorans, TY7 PaGL#38_03147239-269
Methanospirillum hungatei, GP1 MhGP1_02205429-457
Syntrophomonas wolfei, saponavida Swsap_00448249-278
Bacillus subtilis, 30VD-1 PaGL#66_01723241-270
Peribacillus frigoritolerans, 30N-5 PaGL#67_02127241-272
PaGL#67_05229261-291
Micromonospora inositola, Utrum1 PaGL#61_02462234-264
Sphingomonas sp., CR2A3 PaGL#62_02661238-263
Niallia taxi, AG-1 PaGL#37_04178264-294
PaGL#37_02758239-270
Methanospirillum.hungatei GP1, MhGP1 8064047341:MhGP1_00698429-457
MPOB, Sfum 639703492:Sfum_02797239-273
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00535249-280
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01254248-278
Syntrophus aciditrophicus, SB 637860157:SYN_01731250-281
Syntrophus gentianae, DSM8423 Ga0074853_105127:Sgen_00947250-281
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