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MLKi8_00040 Locus tags: • Sequence Length: 538

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550
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MLKi8_00035 MLKi8_00037 MLKi8_00038 MLKi8_00040 MLKi8_00042 MLKi8_00044 
    [SP]_[PF00329]_[PF00112]_[PF00346]_[TM]

    [SP]_[27:PF00329]_[153:PF00112]_[286:PF00346]_[TM]

    [SP]_[17:IPR037232]_[27:IPR001268]_[136:IPR038765]_[153:IPR000668]_[170:IPR029014]_[286:IPR001135]_[TM]

Looking for similar signatures in the working genomes

PF00329:Complex1_30kDa. Respiratory-chain NADH dehydrogenase, 30 Kd subunit

Found 48 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514861.1:LOMAGDGF_005928-98
Pseudobacteroides cellulosolvens, DSM 2933 WP_036935082.1:NEIHKHHH_0501623-93
WP_036943340.1:NEIHKHHH_0511831-151
Paenibacillus guangzhouensis, KCTC 33171 WP_227793357.1:KDFAKKPF_05496199-314
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696069.1:PROKKA_0197451-152
WP_137698905.1:PROKKA_0362510-92
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0035732-144
Syntrophomonas curvata, Scurva Scurva_0153330-142
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0064832-144
Methylobacterium radiotolerans, GTSA1 PaGL#34_0227746-167
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0283931-157
PaGL#35_0638835-154
Syntrophomonas erecta, GB-438 Ga0610585_0035732-144
Variovorax sp., EBFNA2 PaGL#33_0411034-164
Variovorax paradoxus, 2u118 PaGL#32_0361134-164
Dietzia cinnamea, 55 PaGL#56_00390117-239
Maridesulfovibrio salexigens, AnGL23 AnGL23_0174532-138
AnGL23_0388116-115
Variovorax paradoxus, SPNA7 PaGL#43_0365035-164
Methanospirillum lacunae, Ki8-1 MLKi8_0004027-134
MLKi8_0089333-116
MLKi8_0342513-100
Geodermatophilus sp., RDM14 PaGL#36_0383798-226
Methylorubrum populi, CTY4 PaGL#39_0090252-171
Fictibacillus phosphorivorans, TY7 PaGL#38_04564299-414
Methanospirillum hungatei, GP1 MhGP1_0016116-95
MhGP1_0023225-135
MhGP1_0154344-161
Methanospirillum stamsii, Pt1 MLKi8_0046814-94
MLKi8_0053329-138
MLKi8_0189144-161
Syntrophomonas wolfei, saponavida Swsap_0179426-139
Peribacillus frigoritolerans, 30N-5 PaGL#67_00464326-441
Micromonospora inositola, Utrum1 PaGL#61_00575103-225
PaGL#61_0645834-153
Sphingomonas sp., CR2A3 PaGL#62_0081238-159
Methanospirillum.hungatei GP1, MhGP1 8064048017:MhGP1_0135944-161
8064049357:MhGP1_0267025-135
8064049427:MhGP1_0274116-95
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11127:Mhun_0012844-161
Ga0065338_112713:Mhun_0270917-95
Ga0065338_112789:Mhun_0278529-139
MPOB, Sfum 639700955:Sfum_0021434-143
639702710:Sfum_01998255-381
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11370:Szehn_0091732-147
Syntrophus gentianae, DSM8423 Ga0074853_12416:Sgen_0259527-149
Mucilaginibacter gossypii, cycad 4 PaGL#42_0246732-156
PaGL#42_0346735-154

PF00112:Peptidase_C1. Papain family cysteine protease

Found 55 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_014519092.1:FHOCHPCF_0380469-269
Acetivibrio alkalicellulosi, DSM 17461 2510060367:NJMEOJLD_0061544-301
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940965.1:NEIHKHHH_00844213-278
WP_050753379.1:NEIHKHHH_02359188-235
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111085:GJLLLGJL_0106472-293
Clostridium acetobutylicum, ATCC 824 WP_014519092.1:OJAMHIDJ_0381769-269
FD_25_22, AnGL7 AnGL7_0268745-231
FD_YE_37_3, AnGL26 AnGL26_0004330-72
FD_YE_37_9_2, AnGL4 AnGL4_00945154-369
Syntrophus buswellii, Sbus Sbus_0071258-277
Syntrophomonas curvata, Scurva Scurva_0156763-287
Syntrophomonas wolfei methylbutyratica, Swm Swm_0118172-286
FD-25-21, AnGL21 AnGL21_0353563-250
Sunxiuqinia elliptica, AnGL22 AnGL22_0004330-72
FD-YE-37-9-3, AnGL29 AnGL29_01670154-369
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0306334-239
Methanospirillum lacunae, Ki8-1 MLKi8_00406182-389
MLKi8_00610201-410
MLKi8_01048103-326
MLKi8_0146210-62
MLKi8_01763146-362
MLKi8_02532107-337
Geodermatophilus sp., RDM14 PaGL#36_02346165-297
Methanospirillum hungatei, GP1 MhGP1_01099303-532
MhGP1_01828138-355
MhGP1_01991154-375
MhGP1_0235194-314
MhGP1_0243588-297
Methanospirillum stamsii, Pt1 MLKi8_00040153-374
MLKi8_00243105-324
MLKi8_00570532-676
679-717
MLKi8_0063560-280
MLKi8_01343165-378
MLKi8_01345319-538
MLKi8_01528299-530
MLKi8_0182592-301
MLKi8_02616244-477
MLKi8_0322791-301
Methanospirillum.hungatei GP1, MhGP1 8064047102:MhGP1_0046888-297
8064047192:MhGP1_0055294-314
8064047558:MhGP1_00912154-375
8064047722:MhGP1_01075138-355
8064048474:MhGP1_01803303-532
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11705:Mhun_00705303-532
Ga0065338_11706:Mhun_00706320-539
Ga0065338_111285:Mhun_0128690-297
Ga0065338_111536:Mhun_0153787-297
MPOB, Sfum 639700977:Sfum_00236100-313
639701666:Sfum_00936100-313
639704776:Sfum_0409883-315
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0215963-239
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111085:Swol_0106472-293
Syntrophus gentianae, DSM8423 Ga0074853_12520:Sgen_0264258-278
Ruminococcus callidus, ATCC 27760 Rcal_02852215-333

PF00346:Complex1_49kDa. Respiratory-chain NADH dehydrogenase, 49 Kd subunit

Found 80 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514863.1:LOMAGDGF_00591118-282
286-359
Pseudobacteroides cellulosolvens, DSM 2933 WP_036935085.1:NEIHKHHH_05015118-281
285-358
WP_036943340.1:NEIHKHHH_05118297-449
455-523
Paenibacillus guangzhouensis, KCTC 33171 WP_152396328.1:KDFAKKPF_05497119-293
291-365
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696069.1:PROKKA_01974298-451
459-526
WP_137698906.1:PROKKA_03624118-280
285-359
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00358118-294
295-365
Syntrophomonas curvata, Scurva Scurva_01534122-297
299-369
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00647118-294
295-365
Methylobacterium radiotolerans, GTSA1 PaGL#34_02276121-396
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02819141-400
PaGL#35_06387129-402
Syntrophomonas erecta, GB-438 Ga0610585_00358118-294
295-365
Variovorax sp., EBFNA2 PaGL#33_04109119-417
Variovorax paradoxus, 2u118 PaGL#32_03610119-417
Dietzia cinnamea, 55 PaGL#56_00389155-441
Maridesulfovibrio salexigens, AnGL23 AnGL23_01744135-303
307-383
AnGL23_03880118-281
285-358
Variovorax paradoxus, SPNA7 PaGL#43_03649119-417
Methanospirillum lacunae, Ki8-1 MLKi8_00040286-438
MLKi8_00893266-509
MLKi8_03426119-283
286-359
Geodermatophilus sp., RDM14 PaGL#36_03836162-448
Methylorubrum populi, CTY4 PaGL#39_00901121-396
Fictibacillus phosphorivorans, TY7 PaGL#38_04563119-365
Methanospirillum hungatei, GP1 MhGP1_00162119-282
286-359
MhGP1_00232283-439
MhGP1_00544123-281
285-361
MhGP1_01542121-378
Methanospirillum stamsii, Pt1 MLKi8_00469119-282
286-359
MLKi8_00533276-442
MLKi8_00777123-281
286-361
MLKi8_01890121-378
Syntrophomonas wolfei, saponavida Swsap_01795119-295
296-366
Peribacillus frigoritolerans, 30N-5 PaGL#67_00465119-290
290-364
Micromonospora inositola, Utrum1 PaGL#61_00576155-441
PaGL#61_06786142-315
314-389
Sphingomonas sp., CR2A3 PaGL#62_00813137-409
Methanospirillum.hungatei GP1, MhGP1 8064048018:MhGP1_01360121-378
8064049036:MhGP1_02358123-281
285-361
8064049357:MhGP1_02670283-439
8064049426:MhGP1_02740119-282
286-359
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11128:Mhun_00129121-378
Ga0065338_112714:Mhun_02710118-282
286-359
Ga0065338_112789:Mhun_02785278-445
443-518
Ga0065338_113085:Mhun_03084123-281
285-361
MPOB, Sfum 639700956:Sfum_00215126-295
297-373
639702710:Sfum_01998524-795
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00918119-294
295-366
Syntrophus gentianae, DSM8423 Ga0074853_12418:Sgen_02597133-298
299-379
Mucilaginibacter gossypii, cycad 4 PaGL#42_02468141-400
PaGL#42_03466129-402
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