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MLKi8_00493 Locus tags: • Sequence Length: 321

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350
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MLKi8_00490 MLKi8_00492 MLKi8_00493 MLKi8_00495 MLKi8_00496 MLKi8_00497 MLKi8_00498 
    [PF03547]_[PF01193]_[PF03547]_[TM]

    [5:PF03547]_[12:PF01193]_[158:PF03547]_[TM]

    [0:IPR036603]_[5:IPR004776]_[12:IPR009025]_[158:IPR004776]_[TM]

Looking for similar signatures in the working genomes

PF03547:Mem_trans. Membrane transport protein

Found 138 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517461.1:LOMAGDGF_0104217-162
162-328
Clostridium acetobutylicum, DSM 1731 WP_010963688.1:FHOCHPCF_004102-154
FHOCHPCF_029964-153
157-300
Acetivibrio alkalicellulosi, DSM 17461 2510060235:NJMEOJLD_004875-153
155-302
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947346.1:NEIHKHHH_022713-154
158-318
Ruminococcus albus_7, DSM 20455 WP_013498827.1:HCIAFFOI_022519-138
166-322
WP_013499384.1:HCIAFFOI_028862-126
132-273
Clostridium acetobutylicum, ATCC 824 WP_010963688.1:OJAMHIDJ_004112-154
OJAMHIDJ_030054-153
157-300
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698349.1:PROKKA_026326-156
161-320
FD_25_22, AnGL7 AnGL7_00926160-302
AnGL7_03014146-286
AnGL7_03389158-298
FD_25_27, AnGL8 AnGL8_02769169-305
FD_MS_7_1, AnGL28 AnGL28_0017211-136
166-325
AnGL28_007255-149
155-313
AnGL28_025382-148
160-306
FD_SO4_37_1, AnGL2 AnGL2_016672-148
160-306
AnGL2_0285111-136
166-325
AnGL2_034045-149
155-313
FD_YE_25_21, AnGL21 AnGL21_0385216-155
166-307
AnGL21_00951159-306
FD_YE_37_9_2, AnGL4 AnGL4_004665-149
157-301
AnGL4_010107-146
167-311
AnGL4_01338163-303
AnGL4_03258159-298
Terrisporobacter hibernicus, AnGL54 AnGL54_007965-153
158-298
AnGL54_036028-144
158-303
FD-25-21, AnGL21 AnGL21_01636159-302
AnGL21_02883158-298
AnGL21_03212146-284
Paraclostridium benzoelyticum, AnGL27 AnGL27_01198155-300
FD-MS-7-8, AnGL9 AnGL9_001695-150
155-313
AnGL9_012712-154
162-306
AnGL9_02647167-325
FD-YE-37-9-3, AnGL29 AnGL29_00516159-298
AnGL29_011915-149
157-301
AnGL29_017357-146
167-311
AnGL29_02063163-303
Methylobacterium radiotolerans, GTSA1 PaGL#34_045597-146
168-314
PaGL#34_056066-138
161-302
Variovorax sp., EBFNA2 PaGL#33_0064858-180
211-383
PaGL#33_02202150-299
PaGL#33_043914-149
149-307
Variovorax paradoxus, 2u118 PaGL#32_006778-138
156-331
PaGL#32_03563153-299
PaGL#32_038184-150
168-308
Dietzia cinnamea, 55 PaGL#56_022429-142
161-306
Maridesulfovibrio salexigens, AnGL23 AnGL23_037654-154
170-306
Clostridium subterminale, CB-LS10-1 AnGL53_006628-143
160-303
AnGL53_010083-147
154-297
Priestia megaterium, 10L1 PaGL#57_048088-158
161-313
PaGL#57_048199-161
165-313
PaGL#57_0551411-143
Variovorax paradoxus, SPNA7 PaGL#43_006598-141
156-331
PaGL#43_03601154-299
PaGL#43_038624-150
168-308
Methanospirillum lacunae, Ki8-1 MLKi8_00333169-310
MLKi8_0033425-150
171-318
MLKi8_034365-154
158-298
Methylorubrum populi, CTY4 PaGL#39_026842-149
157-302
Fictibacillus phosphorivorans, TY7 PaGL#38_040897-139
156-296
PaGL#38_047048-157
Methanospirillum hungatei, GP1 MhGP1_001895-152
158-300
Methanospirillum stamsii, Pt1 MLKi8_004935-152
158-300
Syntrophomonas wolfei, saponavida Swsap_020093-140
154-301
Bacillus subtilis, 30VD-1 PaGL#66_005976-164
Peribacillus frigoritolerans, 30N-5 PaGL#67_00615154-299
PaGL#67_029686-138
157-295
PaGL#67_042246-156
171-311
Micromonospora inositola, Utrum1 PaGL#61_046945-136
156-300
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_039735-153
158-298
AnGL54_004328-144
158-303
Niallia taxi, AG-1 PaGL#37_019089-155
PaGL#37_021763-145
152-294
PaGL#37_026136-157
162-313
Methanospirillum.hungatei GP1, MhGP1 8064049399:MhGP1_027135-152
158-300
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112750:Mhun_027465-154
158-300
MPOB, Sfum 639702297:Sfum_01579161-300
639702860:Sfum_021545-149
164-303
Ruminococcus callidus, ATCC 27760 Rcal_000023-137
142-286
Rcal_0261411-139
167-311

PF01193:RNA_pol_L. RNA polymerase Rpb3/Rpb11 dimerisation domain

Found 71 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514679.1:LOMAGDGF_0049025-221
Clostridium acetobutylicum, DSM 1731 WP_010966385.1:FHOCHPCF_0315025-221
Acetivibrio alkalicellulosi, DSM 17461 2510061267:NJMEOJLD_0149625-221
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945050.1:NEIHKHHH_0254025-221
Ruminococcus albus_7, DSM 20455 WP_013496822.1:HCIAFFOI_0006626-224
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112465:GJLLLGJL_0241925-220
Paenibacillus guangzhouensis, KCTC 33171 WP_152395402.1:KDFAKKPF_0438425-221
Clostridium acetobutylicum, ATCC 824 WP_010966385.1:OJAMHIDJ_0315925-221
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697986.1:PROKKA_0074525-221
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0241525-220
FD_25_22, AnGL7 AnGL7_0242428-225
AnGL7_0351828-227
FD_25_27, AnGL8 AnGL8_0130728-228
FD_MS_7_1, AnGL28 AnGL28_0284130-226
FD_SO4_25_1_F22, AnGL30 AnGL30_0092327-225
FD_SO4_37_1, AnGL2 AnGL2_0197030-226
FD_YE_25_21, AnGL21 AnGL21_0284528-229
FD_YE_37_3, AnGL26 AnGL26_0110527-224
FD_YE_37_8_2, AnGL3 AnGL3_0140027-224
FD_YE_37_9_2, AnGL4 AnGL4_0239425-225
Syntrophus buswellii, Sbus Sbus_0049731-226
Syntrophomonas curvata, Scurva Scurva_0277825-220
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0110225-220
Syntrophomonas wolfei methylbutyratica, Swm Swm_0280325-220
Terrisporobacter hibernicus, AnGL54 AnGL54_0331025-221
FD-25-21, AnGL21 AnGL21_0024528-225
AnGL21_0275428-227
Sunxiuqinia elliptica, AnGL22 AnGL22_0110727-224
Paraclostridium benzoelyticum, AnGL27 AnGL27_0077825-221
FD-MS-7-8, AnGL9 AnGL9_0303021-217
FD-YE-37-9-3, AnGL29 AnGL29_0311925-225
Methylobacterium radiotolerans, GTSA1 PaGL#34_0244532-228
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0587127-225
Syntrophomonas erecta, GB-438 Ga0610585_0241525-220
Variovorax sp., EBFNA2 PaGL#33_0577625-224
Variovorax paradoxus, 2u118 PaGL#32_0503425-224
Dietzia cinnamea, 55 PaGL#56_0231723-218
Maridesulfovibrio salexigens, AnGL23 AnGL23_0201739-235
Exiguobacterium mexicanum, AnGL24 AnGL24_0294625-221
Clostridium subterminale, CB-LS10-1 AnGL53_0332225-221
Priestia megaterium, 10L1 PaGL#57_0210025-221
PaGL#57_0140130-222
Variovorax paradoxus, SPNA7 PaGL#43_0523025-224
Methanospirillum lacunae, Ki8-1 MLKi8_0049312-84
MLKi8_0166813-258
Geodermatophilus sp., RDM14 PaGL#36_0376023-217
Methylorubrum populi, CTY4 PaGL#39_0192132-228
Fictibacillus phosphorivorans, TY7 PaGL#38_0054925-221
Methanospirillum hungatei, GP1 MhGP1_0071412-83
MhGP1_0130513-258
Methanospirillum stamsii, Pt1 MLKi8_0096613-83
MLKi8_0158913-258
Syntrophomonas wolfei, saponavida Swsap_0093725-220
Bacillus subtilis, 30VD-1 PaGL#66_0002525-221
Peribacillus frigoritolerans, 30N-5 PaGL#67_0011125-221
Micromonospora inositola, Utrum1 PaGL#61_0638623-218
Sphingomonas sp., CR2A3 PaGL#62_0351333-229
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0014625-221
Niallia taxi, AG-1 PaGL#37_0016425-221
Methanospirillum.hungatei GP1, MhGP1 8064048259:MhGP1_0159813-258
8064048862:MhGP1_0218812-83
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11462:Mhun_0046013-258
Ga0065338_113329:Mhun_0332612-83
MPOB, Sfum 639702349:Sfum_0163130-226
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_12633:Spalm_0272325-220
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112465:Swol_0241925-220
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0031325-220
Syntrophus aciditrophicus, SB 637858636:SYN_0030531-226
Syntrophus gentianae, DSM8423 Ga0074853_10253:Sgen_0026431-226
Mucilaginibacter gossypii, cycad 4 PaGL#42_0589427-225
Ruminococcus callidus, ATCC 27760 Rcal_0015027-223

PF03547:Mem_trans. Membrane transport protein

Found 138 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517461.1:LOMAGDGF_0104217-162
162-328
Clostridium acetobutylicum, DSM 1731 WP_010963688.1:FHOCHPCF_004102-154
FHOCHPCF_029964-153
157-300
Acetivibrio alkalicellulosi, DSM 17461 2510060235:NJMEOJLD_004875-153
155-302
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947346.1:NEIHKHHH_022713-154
158-318
Ruminococcus albus_7, DSM 20455 WP_013498827.1:HCIAFFOI_022519-138
166-322
WP_013499384.1:HCIAFFOI_028862-126
132-273
Clostridium acetobutylicum, ATCC 824 WP_010963688.1:OJAMHIDJ_004112-154
OJAMHIDJ_030054-153
157-300
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698349.1:PROKKA_026326-156
161-320
FD_25_22, AnGL7 AnGL7_00926160-302
AnGL7_03014146-286
AnGL7_03389158-298
FD_25_27, AnGL8 AnGL8_02769169-305
FD_MS_7_1, AnGL28 AnGL28_0017211-136
166-325
AnGL28_007255-149
155-313
AnGL28_025382-148
160-306
FD_SO4_37_1, AnGL2 AnGL2_016672-148
160-306
AnGL2_0285111-136
166-325
AnGL2_034045-149
155-313
FD_YE_25_21, AnGL21 AnGL21_0385216-155
166-307
AnGL21_00951159-306
FD_YE_37_9_2, AnGL4 AnGL4_004665-149
157-301
AnGL4_010107-146
167-311
AnGL4_01338163-303
AnGL4_03258159-298
Terrisporobacter hibernicus, AnGL54 AnGL54_007965-153
158-298
AnGL54_036028-144
158-303
FD-25-21, AnGL21 AnGL21_01636159-302
AnGL21_02883158-298
AnGL21_03212146-284
Paraclostridium benzoelyticum, AnGL27 AnGL27_01198155-300
FD-MS-7-8, AnGL9 AnGL9_001695-150
155-313
AnGL9_012712-154
162-306
AnGL9_02647167-325
FD-YE-37-9-3, AnGL29 AnGL29_00516159-298
AnGL29_011915-149
157-301
AnGL29_017357-146
167-311
AnGL29_02063163-303
Methylobacterium radiotolerans, GTSA1 PaGL#34_045597-146
168-314
PaGL#34_056066-138
161-302
Variovorax sp., EBFNA2 PaGL#33_0064858-180
211-383
PaGL#33_02202150-299
PaGL#33_043914-149
149-307
Variovorax paradoxus, 2u118 PaGL#32_006778-138
156-331
PaGL#32_03563153-299
PaGL#32_038184-150
168-308
Dietzia cinnamea, 55 PaGL#56_022429-142
161-306
Maridesulfovibrio salexigens, AnGL23 AnGL23_037654-154
170-306
Clostridium subterminale, CB-LS10-1 AnGL53_006628-143
160-303
AnGL53_010083-147
154-297
Priestia megaterium, 10L1 PaGL#57_048088-158
161-313
PaGL#57_048199-161
165-313
PaGL#57_0551411-143
Variovorax paradoxus, SPNA7 PaGL#43_006598-141
156-331
PaGL#43_03601154-299
PaGL#43_038624-150
168-308
Methanospirillum lacunae, Ki8-1 MLKi8_00333169-310
MLKi8_0033425-150
171-318
MLKi8_034365-154
158-298
Methylorubrum populi, CTY4 PaGL#39_026842-149
157-302
Fictibacillus phosphorivorans, TY7 PaGL#38_040897-139
156-296
PaGL#38_047048-157
Methanospirillum hungatei, GP1 MhGP1_001895-152
158-300
Methanospirillum stamsii, Pt1 MLKi8_004935-152
158-300
Syntrophomonas wolfei, saponavida Swsap_020093-140
154-301
Bacillus subtilis, 30VD-1 PaGL#66_005976-164
Peribacillus frigoritolerans, 30N-5 PaGL#67_00615154-299
PaGL#67_029686-138
157-295
PaGL#67_042246-156
171-311
Micromonospora inositola, Utrum1 PaGL#61_046945-136
156-300
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_039735-153
158-298
AnGL54_004328-144
158-303
Niallia taxi, AG-1 PaGL#37_019089-155
PaGL#37_021763-145
152-294
PaGL#37_026136-157
162-313
Methanospirillum.hungatei GP1, MhGP1 8064049399:MhGP1_027135-152
158-300
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112750:Mhun_027465-154
158-300
MPOB, Sfum 639702297:Sfum_01579161-300
639702860:Sfum_021545-149
164-303
Ruminococcus callidus, ATCC 27760 Rcal_000023-137
142-286
Rcal_0261411-139
167-311
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