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MLKi8_00966 Locus tags: • Sequence Length: 156

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200
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MLKi8_00962 MLKi8_00963 MLKi8_00964 MLKi8_00965 MLKi8_00967 MLKi8_00968 MLKi8_00970 
    [PF08069]_[PF01193]_[PF00312]

    [0:PF08069]_[13:PF01193]_[71:PF00312]

    [0:IPR012606]_[0:IPR012606]_[0:IPR036603]_[13:IPR009025]_[66:IPR009068]_[69:IPR000589]_[70:IPR000589]_[71:IPR000589]

Looking for similar signatures in the working genomes

PF08069:Ribosomal_S13_N. Ribosomal S13/S15 N-terminal domain

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_009660-60
Methanospirillum hungatei, GP1 MhGP1_009560-60
Methanospirillum stamsii, Pt1 MLKi8_012090-60
Methanospirillum.hungatei GP1, MhGP1 8064048619:MhGP1_019460-60
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1145:Mhun_000450-60

PF01193:RNA_pol_L. RNA polymerase Rpb3/Rpb11 dimerisation domain

Found 71 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514679.1:LOMAGDGF_0049025-221
Clostridium acetobutylicum, DSM 1731 WP_010966385.1:FHOCHPCF_0315025-221
Acetivibrio alkalicellulosi, DSM 17461 2510061267:NJMEOJLD_0149625-221
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945050.1:NEIHKHHH_0254025-221
Ruminococcus albus_7, DSM 20455 WP_013496822.1:HCIAFFOI_0006626-224
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112465:GJLLLGJL_0241925-220
Paenibacillus guangzhouensis, KCTC 33171 WP_152395402.1:KDFAKKPF_0438425-221
Clostridium acetobutylicum, ATCC 824 WP_010966385.1:OJAMHIDJ_0315925-221
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697986.1:PROKKA_0074525-221
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0241525-220
FD_25_22, AnGL7 AnGL7_0242428-225
AnGL7_0351828-227
FD_25_27, AnGL8 AnGL8_0130728-228
FD_MS_7_1, AnGL28 AnGL28_0284130-226
FD_SO4_25_1_F22, AnGL30 AnGL30_0092327-225
FD_SO4_37_1, AnGL2 AnGL2_0197030-226
FD_YE_25_21, AnGL21 AnGL21_0284528-229
FD_YE_37_3, AnGL26 AnGL26_0110527-224
FD_YE_37_8_2, AnGL3 AnGL3_0140027-224
FD_YE_37_9_2, AnGL4 AnGL4_0239425-225
Syntrophus buswellii, Sbus Sbus_0049731-226
Syntrophomonas curvata, Scurva Scurva_0277825-220
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0110225-220
Syntrophomonas wolfei methylbutyratica, Swm Swm_0280325-220
Terrisporobacter hibernicus, AnGL54 AnGL54_0331025-221
FD-25-21, AnGL21 AnGL21_0024528-225
AnGL21_0275428-227
Sunxiuqinia elliptica, AnGL22 AnGL22_0110727-224
Paraclostridium benzoelyticum, AnGL27 AnGL27_0077825-221
FD-MS-7-8, AnGL9 AnGL9_0303021-217
FD-YE-37-9-3, AnGL29 AnGL29_0311925-225
Methylobacterium radiotolerans, GTSA1 PaGL#34_0244532-228
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0587127-225
Syntrophomonas erecta, GB-438 Ga0610585_0241525-220
Variovorax sp., EBFNA2 PaGL#33_0577625-224
Variovorax paradoxus, 2u118 PaGL#32_0503425-224
Dietzia cinnamea, 55 PaGL#56_0231723-218
Maridesulfovibrio salexigens, AnGL23 AnGL23_0201739-235
Exiguobacterium mexicanum, AnGL24 AnGL24_0294625-221
Clostridium subterminale, CB-LS10-1 AnGL53_0332225-221
Priestia megaterium, 10L1 PaGL#57_0210025-221
PaGL#57_0140130-222
Variovorax paradoxus, SPNA7 PaGL#43_0523025-224
Methanospirillum lacunae, Ki8-1 MLKi8_0049312-84
MLKi8_0166813-258
Geodermatophilus sp., RDM14 PaGL#36_0376023-217
Methylorubrum populi, CTY4 PaGL#39_0192132-228
Fictibacillus phosphorivorans, TY7 PaGL#38_0054925-221
Methanospirillum hungatei, GP1 MhGP1_0071412-83
MhGP1_0130513-258
Methanospirillum stamsii, Pt1 MLKi8_0096613-83
MLKi8_0158913-258
Syntrophomonas wolfei, saponavida Swsap_0093725-220
Bacillus subtilis, 30VD-1 PaGL#66_0002525-221
Peribacillus frigoritolerans, 30N-5 PaGL#67_0011125-221
Micromonospora inositola, Utrum1 PaGL#61_0638623-218
Sphingomonas sp., CR2A3 PaGL#62_0351333-229
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0014625-221
Niallia taxi, AG-1 PaGL#37_0016425-221
Methanospirillum.hungatei GP1, MhGP1 8064048259:MhGP1_0159813-258
8064048862:MhGP1_0218812-83
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11462:Mhun_0046013-258
Ga0065338_113329:Mhun_0332612-83
MPOB, Sfum 639702349:Sfum_0163130-226
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_12633:Spalm_0272325-220
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112465:Swol_0241925-220
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0031325-220
Syntrophus aciditrophicus, SB 637858636:SYN_0030531-226
Syntrophus gentianae, DSM8423 Ga0074853_10253:Sgen_0026431-226
Mucilaginibacter gossypii, cycad 4 PaGL#42_0589427-225
Ruminococcus callidus, ATCC 27760 Rcal_0015027-223

PF00312:Ribosomal_S15. Ribosomal protein S15

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519031.1:LOMAGDGF_018615-86
Clostridium acetobutylicum, DSM 1731 WP_010965113.1:FHOCHPCF_018515-86
Acetivibrio alkalicellulosi, DSM 17461 2510064024:NJMEOJLD_041955-86
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946321.1:NEIHKHHH_003925-86
Ruminococcus albus_7, DSM 20455 WP_013499264.1:HCIAFFOI_027446-87
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_009268-88
Paenibacillus guangzhouensis, KCTC 33171 WP_152392515.1:KDFAKKPF_010277-88
Clostridium acetobutylicum, ATCC 824 WP_010965113.1:OJAMHIDJ_018595-86
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696048.1:PROKKA_019955-86
Syntrophomonas erecta, DSM 16215 OINOEOOJ_010377-88
FD_25_22, AnGL7 AnGL7_028307-88
FD_25_27, AnGL8 AnGL8_016417-88
FD_MS_7_1, AnGL28 AnGL28_025655-86
FD_SO4_25_1_F22, AnGL30 AnGL30_013017-88
FD_SO4_37_1, AnGL2 AnGL2_016945-86
FD_YE_25_21, AnGL21 AnGL21_025397-88
FD_YE_37_3, AnGL26 AnGL26_023417-88
FD_YE_37_8_2, AnGL3 AnGL3_027577-88
FD_YE_37_9_2, AnGL4 AnGL4_000235-86
Syntrophus buswellii, Sbus Sbus_025258-87
Syntrophomonas curvata, Scurva Scurva_013057-88
Syntrophomonas erecta sporosyntropha, Sespor Sespor_026117-88
Syntrophomonas wolfei methylbutyratica, Swm Swm_010188-88
Terrisporobacter hibernicus, AnGL54 AnGL54_019892-83
FD-25-21, AnGL21 AnGL21_033937-88
Sunxiuqinia elliptica, AnGL22 AnGL22_023387-88
Paraclostridium benzoelyticum, AnGL27 AnGL27_015682-83
FD-MS-7-8, AnGL9 AnGL9_012415-86
FD-YE-37-9-3, AnGL29 AnGL29_007485-86
Methylobacterium radiotolerans, GTSA1 PaGL#34_011147-88
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_033977-88
Syntrophomonas erecta, GB-438 Ga0610585_010377-88
Variovorax sp., EBFNA2 PaGL#33_041186-87
Variovorax paradoxus, 2u118 PaGL#32_036196-87
Dietzia cinnamea, 55 PaGL#56_017507-88
Maridesulfovibrio salexigens, AnGL23 AnGL23_022447-88
Exiguobacterium mexicanum, AnGL24 AnGL24_013147-88
Clostridium subterminale, CB-LS10-1 AnGL53_011715-86
Priestia megaterium, 10L1 PaGL#57_034037-88
Variovorax paradoxus, SPNA7 PaGL#43_036586-87
Methanospirillum lacunae, Ki8-1 MLKi8_0096671-148
Geodermatophilus sp., RDM14 PaGL#36_032137-88
Methylorubrum populi, CTY4 PaGL#39_039027-88
Fictibacillus phosphorivorans, TY7 PaGL#38_023277-88
Methanospirillum hungatei, GP1 MhGP1_0095682-148
Methanospirillum stamsii, Pt1 MLKi8_0120973-148
Syntrophomonas wolfei, saponavida Swsap_000937-88
Bacillus subtilis, 30VD-1 PaGL#66_024627-88
Peribacillus frigoritolerans, 30N-5 PaGL#67_039327-88
Micromonospora inositola, Utrum1 PaGL#61_017667-88
Sphingomonas sp., CR2A3 PaGL#62_028877-88
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_027922-83
Niallia taxi, AG-1 PaGL#37_014567-88
Methanospirillum.hungatei GP1, MhGP1 8064048619:MhGP1_0194682-148
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1145:Mhun_0004581-148
MPOB, Sfum 639702001:Sfum_012787-88
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_014187-88
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_009268-88
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_127118:Szehn_015796-87
Syntrophus aciditrophicus, SB 637861019:SYN_025218-87
Syntrophus gentianae, DSM8423 Sgen_001498-87
Mucilaginibacter gossypii, cycad 4 PaGL#42_025167-88
Ruminococcus callidus, ATCC 27760 Rcal_007446-87
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