SMPP Home

PaGL#42_05960 Locus tags: • Sequence Length: 1221

Mucilaginibacter gossypii, cycad 4 Batch3_genome_fasta/M.gossypii

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850900900950950100010001050105011001100115011501200120012501250
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#42_05960 PaGL#42_05961 PaGL#42_05965
    [SP]_[PF19081]_[PF13585]_[TM]

    [SP]_[994:PF19081]_[1078:PF13585]_[TM]

    [SP]_[994:IPR044023]_[TM]
    

Looking for similar signatures in the working genomes

PF19081:Ig_7. Ig-like domain CHU_C associated

Found 77 similar signatures
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01972100-177
179-253
256-334
336-416
417-495
500-577
578-658
908-987
988-1068
PaGL#35_04539100-178
180-255
256-334
336-416
417-497
500-577
578-655
912-990
992-1069
PaGL#35_06131451-535
536-620
621-702
PaGL#35_06411353-430
432-516
517-602
603-687
847-928
931-1014
1018-1101
1263-1346
1347-1429
1431-1516
1517-1604
1765-1849
1850-1934
1935-2021
2029-2110
2271-2355
2356-2439
2441-2525
2526-2614
2772-2856
2857-2939
2940-3025
3028-3113
3114-3200
3202-3287
3288-3373
3378-3463
3470-3552
3553-3636
3639-3724
3726-3809
Mucilaginibacter gossypii, cycad 4 PaGL#42_01121100-175
178-252
254-333
334-415
418-496
499-576
577-654
907-983
985-1064
PaGL#42_01326366-448
PaGL#42_04312244-324
326-411
509-592
593-678
679-759
PaGL#42_05272118-194
196-267
273-351
352-432
433-512
517-595
596-676
926-1002
1006-1085
PaGL#42_05960994-1073

PF13585:CHU_C. CHU_C Type IX secretion signal domain

Found 44 similar signatures
FD_YE_37_3, AnGL26 AnGL26_00891329-399
AnGL26_01140327-421
AnGL26_016173319-3416
AnGL26_02262322-385
AnGL26_02471384-467
AnGL26_02545969-1064
AnGL26_025942579-2677
FD_YE_37_8_2, AnGL3 AnGL3_004571549-1631
AnGL3_00459233-320
AnGL3_01497315-393
AnGL3_02353854-943
AnGL3_026006229-6293
AnGL3_032011367-1453
AnGL3_034332778-2884
Sunxiuqinia elliptica, AnGL22 AnGL22_00892329-399
AnGL22_01142327-421
AnGL22_016193319-3416
AnGL22_02259322-385
AnGL22_02468384-467
AnGL22_02542969-1064
AnGL22_025912579-2677
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01227562-645
PaGL#35_01482791-875
PaGL#35_01642721-806
PaGL#35_019721686-1768
PaGL#35_032492244-2326
PaGL#35_045391692-1774
PaGL#35_06131800-885
PaGL#35_064113907-3992
Mucilaginibacter gossypii, cycad 4 PaGL#42_005982758-2848
PaGL#42_010132086-2169
PaGL#42_011211683-1767
PaGL#42_014181093-1175
PaGL#42_015461676-1759
PaGL#42_020632113-2202
PaGL#42_030001432-1515
PaGL#42_03833550-636
PaGL#42_04312857-942
PaGL#42_05243555-637
PaGL#42_052721712-1796
PaGL#42_05601859-944
PaGL#42_05708777-857
PaGL#42_05809552-635
PaGL#42_059601078-1150
Search by locus tag: Search
↑ Top





v4.1 @copyright 2025 UCLA