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FHOCHPCF_00548 Locus tags: • Sequence Length: 985

Clostridium acetobutylicum, DSM 1731 GCF_000218855.1

505010010015015020020025025030030035035040040045045050050055055060060065065070070075075080080085085090090095095010001000
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ftsX FHOCHPCF_00544 FHOCHPCF_00545 uvrB FHOCHPCF_00548uvrA FHOCHPCF_00550 FHOCHPCF_00551 FHOCHPCF_00553uvrC 
    [PF17760]_[PF17755]

    [130:PF17760]_[288:PF17755]

    [8:IPR027417]_[130:IPR041102]_[288:IPR041552]_[595:IPR003439]_[616:IPR027417]_[631:IPR003593]

Looking for similar signatures in the working genomes

PF17760:UvrA_inter. UvrA interaction domain

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519292.1:LOMAGDGF_01978131-238
Clostridium acetobutylicum, DSM 1731 WP_010963825.1:FHOCHPCF_00548130-239
Acetivibrio alkalicellulosi, DSM 17461 2510062426:NJMEOJLD_02625131-238
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940813.1:NEIHKHHH_00934133-230
WP_036941752.1:NEIHKHHH_02355131-238
Ruminococcus albus_7, DSM 20455 WP_013497193.1:HCIAFFOI_00470131-237
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11276:GJLLLGJL_00266130-236
Paenibacillus guangzhouensis, KCTC 33171 WP_152395486.1:KDFAKKPF_04503131-239
Clostridium acetobutylicum, ATCC 824 WP_010963825.1:OJAMHIDJ_00549130-239
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696448.1:PROKKA_01556131-239
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02008130-236
FD_25_22, AnGL7 AnGL7_03315129-237
FD_25_27, AnGL8 AnGL8_01467129-236
FD_MS_7_1, AnGL28 AnGL28_02929131-238
FD_SO4_25_1_F22, AnGL30 AnGL30_00420133-244
AnGL30_01715139-243
FD_SO4_37_1, AnGL2 AnGL2_02058131-238
FD_YE_25_21, AnGL21 AnGL21_00289129-235
FD_YE_37_3, AnGL26 AnGL26_00272105-215
AnGL26_01478146-251
FD_YE_37_8_2, AnGL3 AnGL3_00338153-263
AnGL3_03085149-253
FD_YE_37_9_2, AnGL4 AnGL4_02428131-238
AnGL4_02752132-239
Syntrophus buswellii, Sbus Sbus_01990130-236
Syntrophomonas curvata, Scurva Scurva_00323130-237
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01564130-236
Syntrophomonas wolfei methylbutyratica, Swm Swm_00241130-236
Terrisporobacter hibernicus, AnGL54 AnGL54_02940131-238
FD-25-21, AnGL21 AnGL21_02948129-237
Sunxiuqinia elliptica, AnGL22 AnGL22_00273105-215
AnGL22_01480146-251
Paraclostridium benzoelyticum, AnGL27 AnGL27_00903131-238
FD-MS-7-8, AnGL9 AnGL9_03116131-238
FD-YE-37-9-3, AnGL29 AnGL29_00010132-239
AnGL29_03153131-238
Methylobacterium radiotolerans, GTSA1 PaGL#34_01821204-310
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00155140-245
PaGL#35_06156148-208
Syntrophomonas erecta, GB-438 Ga0610585_02008130-236
Variovorax sp., EBFNA2 PaGL#33_00424150-255
PaGL#33_05404133-234
1170-1276
Variovorax paradoxus, 2u118 PaGL#32_00416171-276
PaGL#32_04661142-243
1147-1253
Dietzia cinnamea, 55 PaGL#56_01372130-239
Maridesulfovibrio salexigens, AnGL23 AnGL23_03678167-274
Exiguobacterium mexicanum, AnGL24 AnGL24_02177133-241
Clostridium subterminale, CB-LS10-1 AnGL53_01938132-238
AnGL53_03145130-238
Priestia megaterium, 10L1 PaGL#57_02468131-238
Variovorax paradoxus, SPNA7 PaGL#43_00389171-276
PaGL#43_04803133-234
1164-1270
Methanospirillum lacunae, Ki8-1 MLKi8_02955152-255
Geodermatophilus sp., RDM14 PaGL#36_02826129-237
Methylorubrum populi, CTY4 PaGL#39_03755165-272
Fictibacillus phosphorivorans, TY7 PaGL#38_04056132-240
Methanospirillum hungatei, GP1 MhGP1_02906129-235
Methanospirillum stamsii, Pt1 MLKi8_03502129-235
Syntrophomonas wolfei, saponavida Swsap_01374130-237
Bacillus subtilis, 30VD-1 PaGL#66_00788131-238
Peribacillus frigoritolerans, 30N-5 PaGL#67_00567131-239
Micromonospora inositola, Utrum1 PaGL#61_05200130-238
Sphingomonas sp., CR2A3 PaGL#62_03283130-238
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03743131-238
Niallia taxi, AG-1 PaGL#37_03415131-238
Methanospirillum.hungatei GP1, MhGP1 8064049936:MhGP1_03240129-235
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112089:Mhun_02088129-235
MPOB, Sfum Sfum_00759128-231
1072-1177
639702369:Sfum_01651133-235
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_105108:Spalm_00985130-236
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11276:Swol_00266130-236
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02377130-237
Syntrophus aciditrophicus, SB 637859212:SYN_00842130-238
Syntrophus gentianae, DSM8423 Ga0074853_11722:Sgen_02191130-237
Mucilaginibacter gossypii, cycad 4 PaGL#42_05096141-248
PaGL#42_05652139-199
229-278
Ruminococcus callidus, ATCC 27760 Rcal_01164130-237

PF17755:UvrA_DNA-bind. UvrA DNA-binding domain

Found 86 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519292.1:LOMAGDGF_01978288-401
Clostridium acetobutylicum, DSM 1731 WP_010963825.1:FHOCHPCF_00548288-400
Acetivibrio alkalicellulosi, DSM 17461 2510060231:NJMEOJLD_00483190-302
2510062426:NJMEOJLD_02625288-400
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940813.1:NEIHKHHH_00934294-396
WP_036944234.1:NEIHKHHH_01245193-300
WP_036941752.1:NEIHKHHH_02355288-400
Ruminococcus albus_7, DSM 20455 WP_013497193.1:HCIAFFOI_00470288-400
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11276:GJLLLGJL_00266291-401
Paenibacillus guangzhouensis, KCTC 33171 WP_152393129.1:KDFAKKPF_01723158-252
WP_152394321.1:KDFAKKPF_03108149-245
WP_152395486.1:KDFAKKPF_04503288-398
Clostridium acetobutylicum, ATCC 824 WP_010963825.1:OJAMHIDJ_00549288-400
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696448.1:PROKKA_01556288-401
WP_137696953.1:PROKKA_02994466-582
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02008291-401
FD_25_22, AnGL7 AnGL7_03315288-398
FD_25_27, AnGL8 AnGL8_01467288-398
FD_MS_7_1, AnGL28 AnGL28_02929292-398
FD_SO4_25_1_F22, AnGL30 AnGL30_00420296-360
AnGL30_01715296-403
FD_SO4_37_1, AnGL2 AnGL2_02058292-398
FD_YE_25_21, AnGL21 AnGL21_00289289-399
FD_YE_37_3, AnGL26 AnGL26_00272265-329
AnGL26_01478303-411
FD_YE_37_8_2, AnGL3 AnGL3_00338314-378
AnGL3_03085306-413
FD_YE_37_9_2, AnGL4 AnGL4_00724452-568
AnGL4_02428288-401
AnGL4_02752289-401
Syntrophus buswellii, Sbus Sbus_01990287-396
Syntrophomonas curvata, Scurva Scurva_00323290-400
Scurva_00768154-245
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01564291-401
Syntrophomonas wolfei methylbutyratica, Swm Swm_00241291-401
Terrisporobacter hibernicus, AnGL54 AnGL54_02940287-401
FD-25-21, AnGL21 AnGL21_02948288-398
Sunxiuqinia elliptica, AnGL22 AnGL22_00273265-329
AnGL22_01480303-411
Paraclostridium benzoelyticum, AnGL27 AnGL27_00903287-401
FD-MS-7-8, AnGL9 AnGL9_03116292-398
FD-YE-37-9-3, AnGL29 AnGL29_00010289-401
AnGL29_01449452-568
AnGL29_03153288-401
Methylobacterium radiotolerans, GTSA1 PaGL#34_06531173-239
PaGL#34_01821367-475
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00155296-394
PaGL#35_06156345-409
Syntrophomonas erecta, GB-438 Ga0610585_02008291-401
Variovorax sp., EBFNA2 PaGL#33_00424312-425
PaGL#33_05404290-358
Variovorax paradoxus, 2u118 PaGL#32_00416342-455
PaGL#32_04661299-367
Dietzia cinnamea, 55 PaGL#56_01372294-404
Maridesulfovibrio salexigens, AnGL23 AnGL23_03678325-390
Exiguobacterium mexicanum, AnGL24 AnGL24_02177290-400
Clostridium subterminale, CB-LS10-1 AnGL53_01938294-397
AnGL53_03145288-400
Priestia megaterium, 10L1 PaGL#57_02468288-399
Variovorax paradoxus, SPNA7 PaGL#43_00389342-455
PaGL#43_04803290-358
Methanospirillum lacunae, Ki8-1 MLKi8_01756148-240
MLKi8_02955306-417
Geodermatophilus sp., RDM14 PaGL#36_02826292-402
Methylorubrum populi, CTY4 PaGL#39_03755328-436
Fictibacillus phosphorivorans, TY7 PaGL#38_04056289-398
Methanospirillum hungatei, GP1 MhGP1_02906283-394
Methanospirillum stamsii, Pt1 MLKi8_03502284-394
Syntrophomonas wolfei, saponavida Swsap_01374291-401
Bacillus subtilis, 30VD-1 PaGL#66_00788288-399
Peribacillus frigoritolerans, 30N-5 PaGL#67_00567288-399
Micromonospora inositola, Utrum1 PaGL#61_05200294-404
Sphingomonas sp., CR2A3 PaGL#62_03283343-455
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03743287-401
Niallia taxi, AG-1 PaGL#37_03415288-399
Methanospirillum.hungatei GP1, MhGP1 8064049936:MhGP1_03240283-394
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112089:Mhun_02088283-394
MPOB, Sfum Sfum_00759284-347
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_105108:Spalm_00985290-400
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11276:Swol_00266291-401
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02377291-401
Syntrophus aciditrophicus, SB 637859212:SYN_00842287-395
Syntrophus gentianae, DSM8423 Ga0074853_11722:Sgen_02191287-396
Mucilaginibacter gossypii, cycad 4 PaGL#42_05096297-400
PaGL#42_05652330-394
Ruminococcus callidus, ATCC 27760 Rcal_01164287-399
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