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PROKKA_02994 Locus tags: • Sequence Length: 1151

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

50501001001501502002002502503003003503504004004504505005005505506006006506507007007507508008008508509009009509501000100010501050110011001150115012001200
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PROKKA_02990 PROKKA_02991 unknown PROKKA_02994 PROKKA_02995 PROKKA_02996 
    [PF01980]_[PF17755]

    [142:PF01980]_[466:PF17755]

    [114:IPR023370]_[142:IPR023370]_[143:IPR036413]_[306:IPR027417]_[466:IPR041552]_[778:IPR003439]_[794:IPR027417]

Looking for similar signatures in the working genomes

PF01980:TrmO_N. tRNA-methyltransferase O N-terminal domain

Found 60 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510063480:NJMEOJLD_0365913-120
Ruminococcus albus_7, DSM 20455 WP_013496981.1:HCIAFFOI_0023915-139
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112453:GJLLLGJL_0240726-128
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696953.1:PROKKA_02994142-237
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0023826-128
OINOEOOJ_0158332-144
FD_25_22, AnGL7 AnGL7_0043721-147
FD_25_27, AnGL8 AnGL8_0247323-145
FD_MS_7_1, AnGL28 AnGL28_0312945-164
AnGL28_0317123-135
FD_SO4_37_1, AnGL2 AnGL2_0225945-164
AnGL2_0230123-135
FD_YE_25_21, AnGL21 AnGL21_0242920-142
FD_YE_37_3, AnGL26 AnGL26_0338416-122
FD_YE_37_8_2, AnGL3 AnGL3_0065617-121
FD_YE_37_9_2, AnGL4 AnGL4_00724130-228
Syntrophus buswellii, Sbus Sbus_0085143-155
Sbus_0262729-132
Syntrophomonas curvata, Scurva Scurva_0063932-145
Scurva_0233027-128
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0076726-128
Sespor_0205332-144
Syntrophomonas wolfei methylbutyratica, Swm Swm_0279026-128
Terrisporobacter hibernicus, AnGL54 AnGL54_0464013-123
FD-25-21, AnGL21 AnGL21_0219221-147
Sunxiuqinia elliptica, AnGL22 AnGL22_0338016-122
FD-MS-7-8, AnGL9 AnGL9_0102926-138
AnGL9_0289734-153
FD-YE-37-9-3, AnGL29 AnGL29_01449130-228
Methylobacterium radiotolerans, GTSA1 PaGL#34_0062140-151
Syntrophomonas erecta, GB-438 Ga0610585_0023826-128
Ga0610585_0158332-144
Maridesulfovibrio salexigens, AnGL23 AnGL23_0081520-126
AnGL23_0138625-138
Methanospirillum lacunae, Ki8-1 MLKi8_0103419-130
MLKi8_0022532-145
Methylorubrum populi, CTY4 PaGL#39_0055939-150
Methanospirillum hungatei, GP1 MhGP1_0050119-130
Methanospirillum stamsii, Pt1 MLKi8_0010654-157
MLKi8_0015133-145
MLKi8_0073619-130
Syntrophomonas wolfei, saponavida Swsap_0180731-133
Swsap_0317728-127
Micromonospora inositola, Utrum1 PaGL#61_0396523-132
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0146813-123
Methanospirillum.hungatei GP1, MhGP1 8064049081:MhGP1_0240119-130
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112278:Mhun_0227553-157
Ga0065338_112283:Mhun_0228032-145
Ga0065338_112907:Mhun_0290419-130
MPOB, Sfum 639701025:Sfum_0028320-133
639702675:Sfum_0196322-128
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112453:Swol_0240726-128
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_15310:Szehn_0270914-126
Ga0124040_12723:Szehn_0148420-130
Syntrophus aciditrophicus, SB 637860889:SYN_0239923-135
637861108:SYN_0259430-132
Syntrophus gentianae, DSM8423 Ga0074853_1556:Sgen_0336028-133
Sgen_0044443-155
Ga0074853_14317:Sgen_0320330-132
Ruminococcus callidus, ATCC 27760 Rcal_0275315-139

PF17755:UvrA_DNA-bind. UvrA DNA-binding domain

Found 86 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519292.1:LOMAGDGF_01978288-401
Clostridium acetobutylicum, DSM 1731 WP_010963825.1:FHOCHPCF_00548288-400
Acetivibrio alkalicellulosi, DSM 17461 2510060231:NJMEOJLD_00483190-302
2510062426:NJMEOJLD_02625288-400
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940813.1:NEIHKHHH_00934294-396
WP_036944234.1:NEIHKHHH_01245193-300
WP_036941752.1:NEIHKHHH_02355288-400
Ruminococcus albus_7, DSM 20455 WP_013497193.1:HCIAFFOI_00470288-400
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11276:GJLLLGJL_00266291-401
Paenibacillus guangzhouensis, KCTC 33171 WP_152393129.1:KDFAKKPF_01723158-252
WP_152394321.1:KDFAKKPF_03108149-245
WP_152395486.1:KDFAKKPF_04503288-398
Clostridium acetobutylicum, ATCC 824 WP_010963825.1:OJAMHIDJ_00549288-400
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696448.1:PROKKA_01556288-401
WP_137696953.1:PROKKA_02994466-582
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02008291-401
FD_25_22, AnGL7 AnGL7_03315288-398
FD_25_27, AnGL8 AnGL8_01467288-398
FD_MS_7_1, AnGL28 AnGL28_02929292-398
FD_SO4_25_1_F22, AnGL30 AnGL30_00420296-360
AnGL30_01715296-403
FD_SO4_37_1, AnGL2 AnGL2_02058292-398
FD_YE_25_21, AnGL21 AnGL21_00289289-399
FD_YE_37_3, AnGL26 AnGL26_00272265-329
AnGL26_01478303-411
FD_YE_37_8_2, AnGL3 AnGL3_00338314-378
AnGL3_03085306-413
FD_YE_37_9_2, AnGL4 AnGL4_00724452-568
AnGL4_02428288-401
AnGL4_02752289-401
Syntrophus buswellii, Sbus Sbus_01990287-396
Syntrophomonas curvata, Scurva Scurva_00323290-400
Scurva_00768154-245
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01564291-401
Syntrophomonas wolfei methylbutyratica, Swm Swm_00241291-401
Terrisporobacter hibernicus, AnGL54 AnGL54_02940287-401
FD-25-21, AnGL21 AnGL21_02948288-398
Sunxiuqinia elliptica, AnGL22 AnGL22_00273265-329
AnGL22_01480303-411
Paraclostridium benzoelyticum, AnGL27 AnGL27_00903287-401
FD-MS-7-8, AnGL9 AnGL9_03116292-398
FD-YE-37-9-3, AnGL29 AnGL29_00010289-401
AnGL29_01449452-568
AnGL29_03153288-401
Methylobacterium radiotolerans, GTSA1 PaGL#34_06531173-239
PaGL#34_01821367-475
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00155296-394
PaGL#35_06156345-409
Syntrophomonas erecta, GB-438 Ga0610585_02008291-401
Variovorax sp., EBFNA2 PaGL#33_00424312-425
PaGL#33_05404290-358
Variovorax paradoxus, 2u118 PaGL#32_00416342-455
PaGL#32_04661299-367
Dietzia cinnamea, 55 PaGL#56_01372294-404
Maridesulfovibrio salexigens, AnGL23 AnGL23_03678325-390
Exiguobacterium mexicanum, AnGL24 AnGL24_02177290-400
Clostridium subterminale, CB-LS10-1 AnGL53_01938294-397
AnGL53_03145288-400
Priestia megaterium, 10L1 PaGL#57_02468288-399
Variovorax paradoxus, SPNA7 PaGL#43_00389342-455
PaGL#43_04803290-358
Methanospirillum lacunae, Ki8-1 MLKi8_01756148-240
MLKi8_02955306-417
Geodermatophilus sp., RDM14 PaGL#36_02826292-402
Methylorubrum populi, CTY4 PaGL#39_03755328-436
Fictibacillus phosphorivorans, TY7 PaGL#38_04056289-398
Methanospirillum hungatei, GP1 MhGP1_02906283-394
Methanospirillum stamsii, Pt1 MLKi8_03502284-394
Syntrophomonas wolfei, saponavida Swsap_01374291-401
Bacillus subtilis, 30VD-1 PaGL#66_00788288-399
Peribacillus frigoritolerans, 30N-5 PaGL#67_00567288-399
Micromonospora inositola, Utrum1 PaGL#61_05200294-404
Sphingomonas sp., CR2A3 PaGL#62_03283343-455
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03743287-401
Niallia taxi, AG-1 PaGL#37_03415288-399
Methanospirillum.hungatei GP1, MhGP1 8064049936:MhGP1_03240283-394
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112089:Mhun_02088283-394
MPOB, Sfum Sfum_00759284-347
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_105108:Spalm_00985290-400
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11276:Swol_00266291-401
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02377291-401
Syntrophus aciditrophicus, SB 637859212:SYN_00842287-395
Syntrophus gentianae, DSM8423 Ga0074853_11722:Sgen_02191287-396
Mucilaginibacter gossypii, cycad 4 PaGL#42_05096297-400
PaGL#42_05652330-394
Ruminococcus callidus, ATCC 27760 Rcal_01164287-399
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