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GJLLLGJL_01580 Locus tags: • Sequence Length: 622

Syntrophomonas wolfei subsp. wolfei, Goettingen 637000316

5050100100150150200200250250300300350350400400450450500500550550600600650650
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GJLLLGJL_01572 GJLLLGJL_01579 GJLLLGJL_01580 GJLLLGJL_01581 GJLLLGJL_01583 GJLLLGJL_01584 
    [PF01807]_[PF08275]_[PF13155]_[PF10410]

    [5:PF01807]_[120:PF08275]_[257:PF13155]_[362:PF10410]

    [5:IPR002694]_[34:IPR002694]_[120:IPR013264]_[254:IPR006171]_[254:IPR006171]_[254:IPR034151]_[362:IPR019475]

Looking for similar signatures in the working genomes

PF01807:Zn_ribbon_DnaG. CHC2 zinc finger

Found 78 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_013685-99
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_013536-102
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_0019748-97
2510061767:NJMEOJLD_019816-97
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_007213-96
Ruminococcus albus_7, DSM 20455 WP_013483298.1:HCIAFFOI_033875-101
WP_013483641.1:HCIAFFOI_037672-78
WP_013483781.1:HCIAFFOI_039212-86
WP_013483884.1:HCIAFFOI_040364-89
WP_028504322.1:HCIAFFOI_0072516-78
WP_013498179.1:HCIAFFOI_015671-96
WP_154662713.1:HCIAFFOI_0257716-78
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_015805-98
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_006088-102
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_013576-102
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_021276-100
Syntrophomonas erecta, DSM 16215 OINOEOOJ_003435-97
FD_25_22, AnGL7 AnGL7_033855-101
FD_25_27, AnGL8 AnGL8_014005-100
FD_MS_7_1, AnGL28 AnGL28_034794-100
FD_SO4_25_1_F22, AnGL30 AnGL30_015144-97
FD_SO4_37_1, AnGL2 AnGL2_026094-100
FD_YE_25_21, AnGL21 AnGL21_027236-101
FD_YE_37_3, AnGL26 AnGL26_0190961-156
FD_YE_37_8_2, AnGL3 AnGL3_017963-99
FD_YE_37_9_2, AnGL4 AnGL4_031974-96
Syntrophus buswellii, Sbus Sbus_0011336-83
Sbus_022418-98
Syntrophomonas curvata, Scurva Scurva_020876-96
Syntrophomonas erecta sporosyntropha, Sespor Sespor_006625-97
Syntrophomonas wolfei methylbutyratica, Swm Swm_017445-96
Terrisporobacter hibernicus, AnGL54 AnGL54_0023732-128
AnGL54_008424-97
FD-25-21, AnGL21 AnGL21_028865-102
Sunxiuqinia elliptica, AnGL22 AnGL22_0190661-156
Paraclostridium benzoelyticum, AnGL27 AnGL27_019645-98
FD-MS-7-8, AnGL9 AnGL9_007822-97
FD-YE-37-9-3, AnGL29 AnGL29_004554-96
Methylobacterium radiotolerans, GTSA1 PaGL#34_007414-96
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_012432-96
PaGL#35_019456-100
PaGL#35_024392-96
PaGL#35_0453610-89
Syntrophomonas erecta, GB-438 Ga0610585_003435-97
Variovorax sp., EBFNA2 PaGL#33_020923-97
Variovorax paradoxus, 2u118 PaGL#32_017483-98
Dietzia cinnamea, 55 PaGL#56_011565-101
Maridesulfovibrio salexigens, AnGL23 AnGL23_016192-93
Exiguobacterium mexicanum, AnGL24 AnGL24_019084-97
Clostridium subterminale, CB-LS10-1 AnGL53_012592-96
Priestia megaterium, 10L1 PaGL#57_030085-99
Variovorax paradoxus, SPNA7 PaGL#43_017363-98
Geodermatophilus sp., RDM14 PaGL#36_015789-104
Methylorubrum populi, CTY4 PaGL#39_004654-97
Fictibacillus phosphorivorans, TY7 PaGL#38_00675283-351
PaGL#38_030994-98
Syntrophomonas wolfei, saponavida Swsap_020746-100
Bacillus subtilis, 30VD-1 PaGL#66_017695-99
Peribacillus frigoritolerans, 30N-5 PaGL#67_021766-100
Micromonospora inositola, Utrum1 PaGL#61_0569614-108
Sphingomonas sp., CR2A3 PaGL#62_008444-98
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_042014-81
AnGL54_015724-97
Niallia taxi, AG-1 PaGL#37_027118-101
MPOB, Sfum 639701980:Sfum_012574-91
639704563:Sfum_0388815-81
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_000227-99
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_015805-98
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_024135-98
Syntrophus aciditrophicus, SB SYN_020757-98
Syntrophus gentianae, DSM8423 Sgen_0327712-85
Sgen_000288-98
Sgen_0165126-97
Mucilaginibacter gossypii, cycad 4 PaGL#42_0075210-85
PaGL#42_039462-97
Ruminococcus callidus, ATCC 27760 Rcal_010774-98
Rcal_018805-86
Rcal_0227423-87

PF08275:DNAG_N. DNA primase catalytic core, N-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_01368124-250
Clostridium acetobutylicum, DSM 1731 WP_010964510.1:FHOCHPCF_01252143-220
WP_010964611.1:FHOCHPCF_01353125-247
Acetivibrio alkalicellulosi, DSM 17461 2510061767:NJMEOJLD_01981124-250
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_00721122-256
Ruminococcus albus_7, DSM 20455 WP_013483641.1:HCIAFFOI_0376797-224
WP_013498179.1:HCIAFFOI_01567120-234
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01580120-247
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_00608128-256
Clostridium acetobutylicum, ATCC 824 WP_010964510.1:OJAMHIDJ_01255143-220
WP_010964611.1:OJAMHIDJ_01357125-247
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_02127125-252
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00343120-248
FD_25_22, AnGL7 AnGL7_03385128-255
FD_25_27, AnGL8 AnGL8_01400126-252
FD_MS_7_1, AnGL28 AnGL28_03479122-255
FD_SO4_25_1_F22, AnGL30 AnGL30_01514122-254
FD_SO4_37_1, AnGL2 AnGL2_02609122-255
FD_YE_25_21, AnGL21 AnGL21_02723130-255
FD_YE_37_3, AnGL26 AnGL26_01909189-311
FD_YE_37_8_2, AnGL3 AnGL3_01796132-254
FD_YE_37_9_2, AnGL4 AnGL4_03197123-251
Syntrophus buswellii, Sbus Sbus_02241125-253
Syntrophomonas curvata, Scurva Scurva_02087121-248
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00662120-248
Syntrophomonas wolfei methylbutyratica, Swm Swm_01744120-247
Terrisporobacter hibernicus, AnGL54 AnGL54_00842123-248
FD-25-21, AnGL21 AnGL21_02886128-255
Sunxiuqinia elliptica, AnGL22 AnGL22_01906189-311
Paraclostridium benzoelyticum, AnGL27 AnGL27_01964123-248
FD-MS-7-8, AnGL9 AnGL9_00782121-253
FD-YE-37-9-3, AnGL29 AnGL29_00455123-251
Methylobacterium radiotolerans, GTSA1 PaGL#34_00741121-249
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01243123-252
Syntrophomonas erecta, GB-438 Ga0610585_00343120-248
Variovorax sp., EBFNA2 PaGL#33_02092128-258
Variovorax paradoxus, 2u118 PaGL#32_01748128-255
Dietzia cinnamea, 55 PaGL#56_01156126-255
Maridesulfovibrio salexigens, AnGL23 AnGL23_01619121-247
Exiguobacterium mexicanum, AnGL24 AnGL24_01908126-253
Clostridium subterminale, CB-LS10-1 AnGL53_01259125-246
Priestia megaterium, 10L1 PaGL#57_03008125-255
Variovorax paradoxus, SPNA7 PaGL#43_01736128-255
Geodermatophilus sp., RDM14 PaGL#36_01578133-262
Methylorubrum populi, CTY4 PaGL#39_00465121-249
Fictibacillus phosphorivorans, TY7 PaGL#38_03099125-252
Methanospirillum stamsii, Pt1 MLKi8_0357019-123
Syntrophomonas wolfei, saponavida Swsap_02074121-249
Bacillus subtilis, 30VD-1 PaGL#66_01769127-255
Peribacillus frigoritolerans, 30N-5 PaGL#67_02176128-256
Micromonospora inositola, Utrum1 PaGL#61_05696137-266
Sphingomonas sp., CR2A3 PaGL#62_00844121-245
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01572123-248
Niallia taxi, AG-1 PaGL#37_02711130-255
MPOB, Sfum 639701980:Sfum_01257122-253
639704563:Sfum_03888147-249
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00022121-249
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01580120-247
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_02413121-249
Syntrophus aciditrophicus, SB SYN_02075125-253
Syntrophus gentianae, DSM8423 Sgen_00028125-254
Mucilaginibacter gossypii, cycad 4 PaGL#42_03946123-252
Ruminococcus callidus, ATCC 27760 Rcal_01077120-246

PF13155:Toprim_2. Toprim-like

Found 65 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_01368258-343
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_01353257-342
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_00197204-297
2510061767:NJMEOJLD_01981258-344
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_00721264-350
WP_028308369.1:NEIHKHHH_03091206-311
WP_036935398.1:NEIHKHHH_04875206-311
Ruminococcus albus_7, DSM 20455 WP_013499810.1:HCIAFFOI_03335227-328
WP_013483641.1:HCIAFFOI_03767235-321
WP_013498084.1:HCIAFFOI_01454205-297
WP_013498179.1:HCIAFFOI_01567273-358
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01580257-343
Ga0065332_112418:GJLLLGJL_02371241-323
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_00608265-351
WP_152396809.1:KDFAKKPF_0606822-75
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_01357257-342
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_02127260-346
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00343258-342
FD_25_27, AnGL8 AnGL8_01400263-351
FD_MS_7_1, AnGL28 AnGL28_03479264-349
FD_SO4_25_1_F22, AnGL30 AnGL30_01514263-348
FD_SO4_37_1, AnGL2 AnGL2_02609264-349
FD_YE_25_21, AnGL21 AnGL21_02723267-354
FD_YE_37_3, AnGL26 AnGL26_01909320-405
FD_YE_37_8_2, AnGL3 AnGL3_01796263-348
FD_YE_37_9_2, AnGL4 AnGL4_03197259-345
Syntrophus buswellii, Sbus Sbus_02241264-348
Syntrophomonas curvata, Scurva Scurva_02087259-344
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00662258-342
Syntrophomonas wolfei methylbutyratica, Swm Swm_01744257-343
Swm_02523198-303
Terrisporobacter hibernicus, AnGL54 AnGL54_00842257-343
Sunxiuqinia elliptica, AnGL22 AnGL22_01906320-405
Paraclostridium benzoelyticum, AnGL27 AnGL27_01964257-343
FD-MS-7-8, AnGL9 AnGL9_00782262-347
FD-YE-37-9-3, AnGL29 AnGL29_00455259-345
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01243262-347
PaGL#35_01945211-297
PaGL#35_02693220-304
Syntrophomonas erecta, GB-438 Ga0610585_00343258-342
Variovorax paradoxus, 2u118 PaGL#32_02842150-241
Exiguobacterium mexicanum, AnGL24 AnGL24_01908262-348
Clostridium subterminale, CB-LS10-1 AnGL53_01259256-341
Priestia megaterium, 10L1 PaGL#57_01213332-436
PaGL#57_03008264-350
Fictibacillus phosphorivorans, TY7 PaGL#38_019063-75
PaGL#38_03099263-349
PaGL#38_0392026-80
Syntrophomonas wolfei, saponavida Swsap_02074258-344
Bacillus subtilis, 30VD-1 PaGL#66_01769264-350
Peribacillus frigoritolerans, 30N-5 PaGL#67_02176265-351
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01572257-343
Niallia taxi, AG-1 PaGL#37_05468216-323
PaGL#37_02711265-351
MPOB, Sfum 639701980:Sfum_01257263-349
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00022258-344
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01580257-343
Ga0065332_112418:Swol_02371241-323
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_02413258-344
Syntrophus aciditrophicus, SB SYN_02075263-348
Syntrophus gentianae, DSM8423 Sgen_00028263-348
Mucilaginibacter gossypii, cycad 4 PaGL#42_03946262-347
Ruminococcus callidus, ATCC 27760 Rcal_01405236-320
Rcal_02261188-278
Rcal_0239844-136

PF10410:DnaB_bind. DnaB-helicase binding domain of primase

Found 53 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_01368362-418
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_01353361-415
Acetivibrio alkalicellulosi, DSM 17461 2510061767:NJMEOJLD_01981362-418
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_00721368-424
Ruminococcus albus_7, DSM 20455 WP_013498179.1:HCIAFFOI_01567376-432
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01580362-417
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_00608372-420
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_01357361-415
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_02127365-420
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00343362-417
FD_25_22, AnGL7 AnGL7_03385372-428
FD_25_27, AnGL8 AnGL8_01400369-425
FD_SO4_25_1_F22, AnGL30 AnGL30_01514381-423
FD_YE_25_21, AnGL21 AnGL21_02723373-427
FD_YE_37_3, AnGL26 AnGL26_01909438-480
FD_YE_37_8_2, AnGL3 AnGL3_01796382-422
FD_YE_37_9_2, AnGL4 AnGL4_03197365-414
Syntrophus buswellii, Sbus Sbus_02241368-421
Syntrophomonas curvata, Scurva Scurva_02087363-414
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00662362-417
Syntrophomonas wolfei methylbutyratica, Swm Swm_01744362-417
Terrisporobacter hibernicus, AnGL54 AnGL54_00842363-417
FD-25-21, AnGL21 AnGL21_02886372-428
Sunxiuqinia elliptica, AnGL22 AnGL22_01906438-480
Paraclostridium benzoelyticum, AnGL27 AnGL27_01964363-416
FD-MS-7-8, AnGL9 AnGL9_00782367-421
FD-YE-37-9-3, AnGL29 AnGL29_00455365-414
Methylobacterium radiotolerans, GTSA1 PaGL#34_00741367-417
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01243380-421
Syntrophomonas erecta, GB-438 Ga0610585_00343362-417
Variovorax sp., EBFNA2 PaGL#33_02092374-428
Variovorax paradoxus, 2u118 PaGL#32_01748371-425
Dietzia cinnamea, 55 PaGL#56_01156376-431
Exiguobacterium mexicanum, AnGL24 AnGL24_01908368-422
Clostridium subterminale, CB-LS10-1 AnGL53_01259359-414
Priestia megaterium, 10L1 PaGL#57_03008370-425
Variovorax paradoxus, SPNA7 PaGL#43_01736371-425
Geodermatophilus sp., RDM14 PaGL#36_01578382-434
Methylorubrum populi, CTY4 PaGL#39_00465367-417
Fictibacillus phosphorivorans, TY7 PaGL#38_03099369-424
Syntrophomonas wolfei, saponavida Swsap_02074363-418
Bacillus subtilis, 30VD-1 PaGL#66_01769370-425
Peribacillus frigoritolerans, 30N-5 PaGL#67_02176371-426
Micromonospora inositola, Utrum1 PaGL#61_05696386-440
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01572363-417
Niallia taxi, AG-1 PaGL#37_02711371-426
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00022363-418
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01580362-417
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_02413363-418
Syntrophus aciditrophicus, SB SYN_02075368-421
Syntrophus gentianae, DSM8423 Sgen_00028368-421
Mucilaginibacter gossypii, cycad 4 PaGL#42_03946380-421
Ruminococcus callidus, ATCC 27760 Rcal_01077359-412
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