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PROKKA_03495 Locus tags: • Sequence Length: 637

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

5050100100150150200200250250300300350350400400450450500500550550600600650650
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PROKKA_03490 PROKKA_03492 PROKKA_03493 PROKKA_03494 PROKKA_03495 PROKKA_03496 PROKKA_03497 PROKKA_03498 PROKKA_03499 
    [SP]_[PF16499]_[PF17801]_[PF03422]_[TM]

    [SP]_[34:PF16499]_[318:PF17801]_[410:PF03422]_[TM]

    [SP]_[26:IPR017853]_[29:IPR002241]_[34:IPR002241]_[35:IPR002241]_[65:IPR002241]_[107:IPR002241]_[143:IPR002241]_[171:IPR002241]_[240:IPR002241]_[261:IPR002241]_[318:IPR041233]_[402:IPR006584]_[402:IPR008979]_[407:IPR005084]_[410:IPR005084]_[534:IPR016134]_[535:IPR036439]_[TM]

Looking for similar signatures in the working genomes

PF16499:Melibiase_2. Alpha galactosidase A

Found 35 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942018.1:NEIHKHHH_0316434-308
Ruminococcus albus_7, DSM 20455 WP_013497759.1:HCIAFFOI_010984-112
154-330
WP_013498233.1:HCIAFFOI_016258-287
Paenibacillus guangzhouensis, KCTC 33171 WP_152391927.1:KDFAKKPF_0034955-131
177-361
WP_152396611.1:KDFAKKPF_0582640-167
287-432
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697513.1:PROKKA_0056140-304
WP_137697423.1:PROKKA_0349534-306
FD_MS_7_1, AnGL28 AnGL28_01402149-248
274-459
AnGL28_02011132-233
261-441
FD_SO4_37_1, AnGL2 AnGL2_00531149-248
274-459
AnGL2_01140132-233
261-441
FD_YE_37_8_2, AnGL3 AnGL3_0185928-301
AnGL3_0362138-143
186-365
FD_YE_37_9_2, AnGL4 AnGL4_025499-288
FD-YE-37-9-3, AnGL29 AnGL29_032749-288
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01198189-367
PaGL#35_02231372-650
PaGL#35_0569132-137
176-359
Sphingomonas sp., CR2A3 PaGL#62_0052547-317
PaGL#62_02112176-350
Niallia taxi, AG-1 PaGL#37_010108-116
157-341
Mucilaginibacter gossypii, cycad 4 PaGL#42_03127373-653
PaGL#42_03325372-651
PaGL#42_0369375-193
236-413

PF17801:Melibiase_C. Alpha galactosidase C-terminal beta sandwich domain

Found 26 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942018.1:NEIHKHHH_03164321-394
Ruminococcus albus_7, DSM 20455 WP_013497759.1:HCIAFFOI_01098347-417
WP_013498233.1:HCIAFFOI_01625307-378
Paenibacillus guangzhouensis, KCTC 33171 WP_152391927.1:KDFAKKPF_00349373-447
WP_152391934.1:KDFAKKPF_00357614-679
WP_152391936.1:KDFAKKPF_003601050-1116
WP_152396611.1:KDFAKKPF_05826443-519
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697513.1:PROKKA_00561316-393
WP_137697423.1:PROKKA_03495318-394
FD_MS_7_1, AnGL28 AnGL28_01402471-544
AnGL28_02011453-526
FD_SO4_37_1, AnGL2 AnGL2_00531471-544
AnGL2_01140453-526
FD_YE_37_8_2, AnGL3 AnGL3_01859313-399
AnGL3_03621378-454
FD_YE_37_9_2, AnGL4 AnGL4_02549299-376
FD-YE-37-9-3, AnGL29 AnGL29_03274299-376
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01198378-452
PaGL#35_02231662-736
PaGL#35_05691375-447
Sphingomonas sp., CR2A3 PaGL#62_00525328-405
PaGL#62_02112361-435
Niallia taxi, AG-1 PaGL#37_01010351-424
Mucilaginibacter gossypii, cycad 4 PaGL#42_03127665-739
PaGL#42_03325663-737
PaGL#42_03693428-499

PF03422:CBM_6. Carbohydrate binding module (family 6)

Found 175 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518511.1:LOMAGDGF_00517437-550
WP_014522591.1:LOMAGDGF_00542254-374
LOMAGDGF_00543254-374
WP_003514882.1:LOMAGDGF_00583441-555
WP_003517499.1:LOMAGDGF_01023341-462
491-606
WP_235715169.1:LOMAGDGF_02046130-229
WP_003519296.1:LOMAGDGF_0266394-219
238-324
WP_003518444.1:LOMAGDGF_02715301-419
WP_003516694.1:LOMAGDGF_02878588-722
WP_003516839.1:LOMAGDGF_02943401-514
WP_003513667.1:LOMAGDGF_02944535-657
WP_003516837.1:LOMAGDGF_02945302-424
WP_003516835.1:LOMAGDGF_02946774-895
WP_003513660.1:LOMAGDGF_02947331-452
WP_003513657.1:LOMAGDGF_02948822-943
Clostridium acetobutylicum, DSM 1731 WP_010890799.1:FHOCHPCF_03915329-450
WP_010890804.1:FHOCHPCF_03920406-534
Acetivibrio alkalicellulosi, DSM 17461 2510059819:NJMEOJLD_00082378-494
2510059909:NJMEOJLD_00171260-380
2510060326:NJMEOJLD_0057530-148
2510060345:NJMEOJLD_00594268-388
2510060346:NJMEOJLD_00595380-508
521-639
2510060347:NJMEOJLD_00596307-425
2510060710:NJMEOJLD_00953423-538
614-729
2510061384:NJMEOJLD_0160892-217
234-321
2510061482:NJMEOJLD_01706310-428
2510061753:NJMEOJLD_01968452-572
2510061812:NJMEOJLD_02026274-394
437-557
2510062627:NJMEOJLD_02826297-414
2510063153:NJMEOJLD_03340137-256
2510063176:NJMEOJLD_03363310-428
2510063351:NJMEOJLD_03534396-510
902-1022
2510063454:NJMEOJLD_03633260-378
2510063458:NJMEOJLD_03637674-782
789-907
2510063459:NJMEOJLD_03638433-551
2510063922:NJMEOJLD_04094262-382
647-767
2510064180:NJMEOJLD_04348269-389
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946329.1:NEIHKHHH_00399217-331
WP_036943862.1:NEIHKHHH_00640256-377
WP_050753051.1:NEIHKHHH_00695440-558
NEIHKHHH_01117260-373
410-523
WP_036945771.1:NEIHKHHH_01262884-1000
1012-1129
WP_082225131.1:NEIHKHHH_01647260-377
WP_036944027.1:NEIHKHHH_0279997-223
236-330
WP_081926923.1:NEIHKHHH_03115260-377
WP_081926927.1:NEIHKHHH_03134366-482
WP_036941980.1:NEIHKHHH_03136339-461
WP_166433568.1:NEIHKHHH_03152322-443
472-593
WP_242857017.1:NEIHKHHH_03153207-328
NEIHKHHH_03155233-354
NEIHKHHH_0315868-189
WP_036942018.1:NEIHKHHH_03164423-541
WP_036936763.1:NEIHKHHH_03858347-468
WP_036935605.1:NEIHKHHH_04745227-348
444-563
WP_081927030.1:NEIHKHHH_05247349-470
WP_036945222.1:NEIHKHHH_05477236-317
636-732
Ruminococcus albus_7, DSM 20455 WP_013497550.1:HCIAFFOI_00881387-491
WP_013497750.1:HCIAFFOI_01088634-743
WP_013499363.1:HCIAFFOI_02865907-1014
Paenibacillus guangzhouensis, KCTC 33171 WP_152391936.1:KDFAKKPF_0036049-144
WP_152392087.1:KDFAKKPF_00523582-693
WP_152393341.1:KDFAKKPF_01976662-783
1394-1508
1540-1632
WP_265333538.1:KDFAKKPF_01977440-558
WP_152393343.1:KDFAKKPF_01981493-609
WP_152394325.1:KDFAKKPF_03113528-645
675-776
811-921
WP_152394487.1:KDFAKKPF_03305359-478
WP_152394516.1:KDFAKKPF_03337575-680
Clostridium acetobutylicum, ATCC 824 WP_010890799.1:OJAMHIDJ_03928329-450
WP_010890804.1:OJAMHIDJ_03933406-534
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_244648327.1:PROKKA_00820332-454
WP_137698056.1:PROKKA_00825255-372
WP_137696473.1:PROKKA_01528330-446
WP_137696345.1:PROKKA_0167238-159
WP_137696243.1:PROKKA_01785293-414
WP_137696098.1:PROKKA_01945336-456
WP_137695875.1:PROKKA_02186469-589
WP_137695874.1:PROKKA_02187681-803
WP_137698321.1:PROKKA_02602360-484
WP_137698322.1:PROKKA_02603760-881
WP_137698323.1:PROKKA_02604318-439
WP_137696884.1:PROKKA_02923657-779
WP_137697419.1:PROKKA_034881014-1135
WP_244648278.1:PROKKA_03489304-427
WP_137697420.1:PROKKA_03490304-427
WP_137697493.1:PROKKA_03491304-427
WP_137697421.1:PROKKA_03492971-1093
WP_137697422.1:PROKKA_03493350-472
WP_137697494.1:PROKKA_03494444-566
WP_137697423.1:PROKKA_03495410-532
WP_137697424.1:PROKKA_03496924-1046
WP_137697425.1:PROKKA_03497330-452
465-588
WP_137697426.1:PROKKA_03498346-468
WP_137697427.1:PROKKA_03499530-652
FD_MS_7_1, AnGL28 AnGL28_00364341-439
530-650
660-781
AnGL28_00372404-516
AnGL28_003731025-1144
AnGL28_00766226-316
AnGL28_00767205-311
AnGL28_008681310-1424
AnGL28_03237342-445
FD_SO4_37_1, AnGL2 AnGL2_02367342-445
AnGL2_03043341-439
530-650
660-781
AnGL2_03051404-516
AnGL2_030521025-1144
AnGL2_03445226-316
AnGL2_03446205-311
AnGL2_035471310-1424
FD_YE_37_3, AnGL26 AnGL26_0344979-179
FD_YE_37_8_2, AnGL3 AnGL3_00553795-897
AnGL3_0288326-148
AnGL3_03328727-835
Sunxiuqinia elliptica, AnGL22 AnGL22_0344579-179
FD-MS-7-8, AnGL9 AnGL9_00512325-445
AnGL9_00514324-446
AnGL9_01735976-1089
AnGL9_01879680-804
AnGL9_01880804-927
AnGL9_01921824-926
AnGL9_01940884-1011
AnGL9_02436894-1026
AnGL9_02442263-390
395-511
965-1082
AnGL9_02455350-473
AnGL9_02469819-929
AnGL9_02484862-983
AnGL9_02498506-621
AnGL9_02534680-796
AnGL9_02539665-782
AnGL9_02540949-1063
AnGL9_02543930-1046
AnGL9_025611075-1191
AnGL9_02569504-623
AnGL9_02570540-658
1111-1228
AnGL9_02575694-809
821-950
AnGL9_02613385-512
519-647
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03584107-216
PaGL#35_046111060-1162
Bacillus subtilis, 30VD-1 PaGL#66_02306456-584
Micromonospora inositola, Utrum1 PaGL#61_03018930-1057
PaGL#61_03736635-742
PaGL#61_05663976-1104
PaGL#61_05668447-570
PaGL#61_05669691-814
PaGL#61_06079347-473
Mucilaginibacter gossypii, cycad 4 PaGL#42_01715348-447
PaGL#42_028381042-1145
Ruminococcus callidus, ATCC 27760 Rcal_021611150-1256
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