SMPP Home

PaGL#34_02170 Locus tags: • Sequence Length: 1105

Methylobacterium radiotolerans, GTSA1 Batch2_genome_fasta/M.radiotolerans.GTSA1

505010010015015020020025025030030035035040040045045050050055055060060065065070070075075080080085085090090095095010001000105010501100110011501150
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#34_02166 PaGL#34_02167 PaGL#34_02169 PaGL#34_02170 PaGL#34_02173 
    [SP]_[PF01569]_[PF12951]_[PF12951]_[PF03797]_[TM]

    [SP]_[151:PF01569]_[422:PF12951]_[487:PF12951]_[773:PF03797]_[TM]

    [SP]_[142:IPR036938]_[143:IPR000326]_[151:IPR000326]_[193:IPR001011]_[225:IPR001011]_[385:IPR011050]_[422:IPR013425]_[487:IPR013425]_[704:IPR036709]_[766:IPR005546]_[770:IPR005546]_[773:IPR005546]_[TM]

Looking for similar signatures in the working genomes

PF01569:PAP2. PAP2 superfamily

Found 175 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010963925.1:FHOCHPCF_0065057-170
WP_010963952.1:FHOCHPCF_00677129-283
FHOCHPCF_00788186-298
WP_010964606.1:FHOCHPCF_01348157-231
WP_010964798.1:FHOCHPCF_01539104-209
WP_010965691.1:FHOCHPCF_0243362-166
WP_241393121.1:FHOCHPCF_0247560-172
WP_010965830.1:FHOCHPCF_0257061-168
Acetivibrio alkalicellulosi, DSM 17461 2510061720:NJMEOJLD_01935157-232
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753392.1:NEIHKHHH_0242551-194
Ruminococcus albus_7, DSM 20455 WP_013498238.1:HCIAFFOI_0163060-174
Paenibacillus guangzhouensis, KCTC 33171 WP_152391737.1:KDFAKKPF_0014086-251
WP_227793447.1:KDFAKKPF_0106163-172
KDFAKKPF_01801335-411
WP_152394833.1:KDFAKKPF_03700117-227
WP_227793264.1:KDFAKKPF_0380089-207
Clostridium acetobutylicum, ATCC 824 WP_010963925.1:OJAMHIDJ_0065157-170
WP_010963952.1:OJAMHIDJ_00678129-283
OJAMHIDJ_00791186-298
WP_010964606.1:OJAMHIDJ_01352157-231
WP_010964798.1:OJAMHIDJ_01543104-209
WP_010965691.1:OJAMHIDJ_0244362-166
WP_241393121.1:OJAMHIDJ_0248560-172
WP_010965830.1:OJAMHIDJ_0258061-168
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698066.1:PROKKA_00835121-209
WP_137696265.1:PROKKA_0175789-195
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0038868-179
FD_SO4_25_1_F22, AnGL30 AnGL30_0029187-203
FD_YE_25_21, AnGL21 AnGL21_0199894-225
AnGL21_0200778-154
FD_YE_37_3, AnGL26 AnGL26_0015393-208
AnGL26_0161062-179
AnGL26_03386132-237
FD_YE_37_8_2, AnGL3 AnGL3_02351139-245
AnGL3_0339561-180
AnGL3_03475141-219
Syntrophus buswellii, Sbus Sbus_02351165-277
Syntrophomonas curvata, Scurva Scurva_0083170-180
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0061768-179
Syntrophomonas wolfei methylbutyratica, Swm Swm_0205692-186
Terrisporobacter hibernicus, AnGL54 AnGL54_0421254-164
AnGL54_00935140-239
AnGL54_02382161-234
Sunxiuqinia elliptica, AnGL22 AnGL22_0015493-208
AnGL22_0161262-179
AnGL22_03382132-237
Paraclostridium benzoelyticum, AnGL27 AnGL27_01379161-236
AnGL27_0332352-162
Methylobacterium radiotolerans, GTSA1 PaGL#34_00388125-219
PaGL#34_01001118-235
PaGL#34_02170151-264
PaGL#34_0395699-289
PaGL#34_04091190-296
PaGL#34_04561155-249
PaGL#34_05270129-319
PaGL#34_05339122-220
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01018310-427
PaGL#35_0209280-201
PaGL#35_0256287-194
PaGL#35_03489308-428
PaGL#35_03500404-508
PaGL#35_0364263-182
PaGL#35_0384683-195
PaGL#35_03938142-222
PaGL#35_05144117-287
PaGL#35_05584302-432
Syntrophomonas erecta, GB-438 Ga0610585_0038868-179
Variovorax sp., EBFNA2 PaGL#33_0685571-185
PaGL#33_01568114-226
PaGL#33_02175130-230
PaGL#33_02197138-227
PaGL#33_0240589-219
PaGL#33_0240656-162
PaGL#33_05455148-266
PaGL#33_0554398-215
Variovorax paradoxus, 2u118 PaGL#32_0114770-149
PaGL#32_01906134-222
PaGL#32_0270392-198
PaGL#32_0339456-162
PaGL#32_0339595-218
PaGL#32_0385776-187
PaGL#32_04710143-259
PaGL#32_04843101-217
Dietzia cinnamea, 55 PaGL#56_0031179-176
PaGL#56_03024138-247
PaGL#56_03223104-215
Maridesulfovibrio salexigens, AnGL23 AnGL23_0036093-204
AnGL23_0192762-184
AnGL23_0382089-207
Exiguobacterium mexicanum, AnGL24 AnGL24_0111180-184
Clostridium subterminale, CB-LS10-1 AnGL53_01250156-230
AnGL53_0235859-198
AnGL53_0263062-167
AnGL53_0318461-173
Priestia megaterium, 10L1 PaGL#57_0191260-171
PaGL#57_0252358-169
PaGL#57_0269263-171
PaGL#57_0352186-202
PaGL#57_05043127-218
PaGL#57_0683968-199
Variovorax paradoxus, SPNA7 PaGL#43_00954129-223
PaGL#43_0652484-192
PaGL#43_0114570-150
PaGL#43_01824134-222
PaGL#43_0343456-162
PaGL#43_0343578-201
PaGL#43_0390456-167
PaGL#43_04853143-262
PaGL#43_05022101-217
Geodermatophilus sp., RDM14 PaGL#36_00333115-205
PaGL#36_0045069-172
PaGL#36_0086566-171
PaGL#36_0086691-200
PaGL#36_01147135-248
PaGL#36_01364115-224
PaGL#36_01728106-212
PaGL#36_02736117-308
PaGL#36_0315598-211
PaGL#36_03447132-243
PaGL#36_0345092-201
PaGL#36_0345190-197
Methylorubrum populi, CTY4 PaGL#39_01519156-243
PaGL#39_01941130-320
PaGL#39_02958121-237
PaGL#39_037405-118
Fictibacillus phosphorivorans, TY7 PaGL#38_01110101-212
PaGL#38_0120840-193
PaGL#38_01265123-231
PaGL#38_01275120-202
PaGL#38_0275781-192
PaGL#38_0290990-205
PaGL#38_0364564-176
Methanospirillum hungatei, GP1 MhGP1_0216452-161
Syntrophomonas wolfei, saponavida Swsap_0058971-181
Swsap_0259566-169
Bacillus subtilis, 30VD-1 PaGL#66_0064854-163
PaGL#66_0216478-193
Peribacillus frigoritolerans, 30N-5 PaGL#67_0104689-171
PaGL#67_0140389-171
PaGL#67_0162253-194
PaGL#67_0167490-206
Micromonospora inositola, Utrum1 PaGL#61_0046971-181
PaGL#61_02005103-219
351-464
PaGL#61_0295559-238
PaGL#61_0500897-197
PaGL#61_05105136-303
PaGL#61_0670293-224
PaGL#61_06735299-447
PaGL#61_06822114-233
PaGL#61_0682396-214
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0104154-164
AnGL54_01664140-239
AnGL54_03186161-234
Niallia taxi, AG-1 PaGL#37_04404190-307
PaGL#37_0075488-203
PaGL#37_02362108-216
Methanospirillum.hungatei GP1, MhGP1 8064047382:MhGP1_0073952-161
MPOB, Sfum Sfum_00392133-248
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11017:Spalm_0157972-179
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0231875-189
Syntrophus aciditrophicus, SB SYN_00454100-215
Syntrophus gentianae, DSM8423 Ga0074853_11467:Sgen_0199079-194
Mucilaginibacter gossypii, cycad 4 PaGL#42_0013580-202
PaGL#42_00376302-425
PaGL#42_00807111-287
PaGL#42_01161408-504
PaGL#42_0124362-182
PaGL#42_01439310-436
PaGL#42_02403305-429
PaGL#42_02872186-263
PaGL#42_02950106-213
PaGL#42_03681304-414
PaGL#42_05485309-433
Ruminococcus callidus, ATCC 27760 Rcal_0199861-172

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF03797:Autotransporter. Autotransporter beta-domain

Found 28 similar signatures
FD_MS_7_1, AnGL28 AnGL28_003881276-1535
AnGL28_02573853-1084
AnGL28_02594661-902
AnGL28_025961054-1296
AnGL28_02684871-1112
AnGL28_03027844-1081
AnGL28_03080850-1097
FD_SO4_37_1, AnGL2 AnGL2_01702853-1084
AnGL2_01723661-902
AnGL2_017251054-1296
AnGL2_01813871-1112
AnGL2_02156844-1081
AnGL2_02209850-1097
AnGL2_030671276-1535
FD-MS-7-8, AnGL9 AnGL9_00115838-1086
AnGL9_011991268-1512
AnGL9_01201662-898
AnGL9_01234932-1176
AnGL9_01304912-1155
AnGL9_02843787-1023
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170773-1033
PaGL#34_04677669-925
Variovorax sp., EBFNA2 PaGL#33_05162763-1009
Variovorax paradoxus, 2u118 PaGL#32_03951788-1033
Variovorax paradoxus, SPNA7 PaGL#43_064671065-1312
PaGL#43_03994795-1040
Sphingomonas sp., CR2A3 PaGL#62_03722914-1135
Syntrophus aciditrophicus, SB 637859797:SYN_01388469-722
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA