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PaGL#33_06282 Locus tags: • Sequence Length: 2946

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

2002004004006006008008001000100012001200140014001600160018001800200020002200220024002400260026002800280030003000
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PaGL#33_00244 PaGL#33_06282 PaGL#33_00245 PaGL#33_00246 PaGL#33_00248
    [PF13018]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF12951]_[PF18883]_[TM]

    [0:PF13018]_[386:PF12951]_[563:PF12951]_[868:PF12951]_[1212:PF12951]_[1517:PF12951]_[1608:PF12951]_[1767:PF12951]_[2075:PF12951]_[2138:PF12951]_[2275:PF12951]_[2333:PF18883]_[TM]

    [0:IPR024973]_[386:IPR013425]_[430:IPR011050]_[563:IPR013425]_[682:IPR011050]_[868:IPR013425]_[948:IPR011050]_[1212:IPR013425]_[1339:IPR011050]_[1517:IPR013425]_[1586:IPR011050]_[1608:IPR013425]_[1767:IPR013425]_[1892:IPR011050]_[2075:IPR013425]_[2112:IPR011050]_[2138:IPR013425]_[2266:IPR043990]_[2275:IPR013425]_[2333:IPR043990]_[2526:IPR005546]_[2526:IPR036709]_[2530:IPR005546]_[TM]
    

Looking for similar signatures in the working genomes

PF13018:ESPR. Extended Signal Peptide of Type V secretion system

Found 12 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062820-47
PaGL#33_067680-49
PaGL#33_051620-48
Variovorax paradoxus, 2u118 PaGL#32_055060-47
PaGL#32_061530-38
PaGL#32_022640-49
PaGL#32_039510-47
Variovorax paradoxus, SPNA7 PaGL#43_002460-42
PaGL#43_060860-37
PaGL#43_064670-51
PaGL#43_064900-48
PaGL#43_039940-41

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF12951:PATR. Passenger-associated-transport-repeat

Found 66 similar signatures
FD_YE_37_8_2, AnGL3 AnGL3_02854688-718
952-980
1046-1074
1237-1267
AnGL3_02855685-715
942-972
1042-1055
1232-1261
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170422-451
487-517
PaGL#34_0467765-93
352-382
Variovorax sp., EBFNA2 PaGL#33_06282386-416
563-593
868-898
1212-1242
1517-1547
1608-1637
1767-1796
2075-2102
2138-2167
2275-2303
Variovorax paradoxus, SPNA7 PaGL#43_06467491-520
722-752
812-841
Methylorubrum populi, CTY4 PaGL#39_01404697-725
785-815
891-915
1080-1108
1173-1201
1240-1273
1546-1576
1764-1794
1854-1884
Micromonospora inositola, Utrum1 PaGL#61_04656544-574
Sphingomonas sp., CR2A3 PaGL#62_00590315-335
639-659
1106-1141
1330-1360
1402-1432
1558-1588
1714-1744
1785-1812
2083-2113
2172-2202
2244-2271
2313-2337
2614-2644
2703-2731
3003-3033
3072-3101
3140-3170
3817-3847
3905-3935
3977-4003
4272-4301
4363-4391
4659-4689
PaGL#62_01175597-626
1197-1225
1271-1290
1358-1388
2775-2802
3211-3237
4145-4172
Niallia taxi, AG-1 PaGL#37_04404453-481

PF18883:AC_1. Autochaperone Domain Type 1

Found 6 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062822333-2449
PaGL#33_05162544-660
Variovorax paradoxus, 2u118 PaGL#32_03951538-653
Variovorax paradoxus, SPNA7 PaGL#43_06467869-987
PaGL#43_03994538-653
Sphingomonas sp., CR2A3 PaGL#62_005904809-4911
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