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PaGL#32_02264 Locus tags: • Sequence Length: 3471

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

2002004004006006008008001000100012001200140014001600160018001800200020002200220024002400260026002800280030003000320032003400340036003600
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unknown PaGL#32_02264 PaGL#32_02265 
    [SP]_[PF13018]_[PF05860]_[PF13332]_[PF13332]_[PF13332]_[TM]

    [SP]_[0:PF13018]_[67:PF05860]_[2357:PF13332]_[2439:PF13332]_[2589:PF13332]_[TM]

    [SP]_[0:IPR024973]_[67:IPR008638]_[76:IPR011050]_[87:IPR008638]_[2357:IPR025157]_[2439:IPR025157]_[2589:IPR025157]_[TM]

Looking for similar signatures in the working genomes

PF13018:ESPR. Extended Signal Peptide of Type V secretion system

Found 12 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062820-47
PaGL#33_067680-49
PaGL#33_051620-48
Variovorax paradoxus, 2u118 PaGL#32_055060-47
PaGL#32_061530-38
PaGL#32_022640-49
PaGL#32_039510-47
Variovorax paradoxus, SPNA7 PaGL#43_002460-42
PaGL#43_060860-37
PaGL#43_064670-51
PaGL#43_064900-48
PaGL#43_039940-41

PF05860:TPS. TPS secretion domain

Found 16 similar signatures
FD_25_27, AnGL8 AnGL8_0199926-280
Syntrophus buswellii, Sbus Sbus_0212176-307
Variovorax sp., EBFNA2 PaGL#33_06271166-407
PaGL#33_0055464-294
PaGL#33_06693151-417
PaGL#33_06801154-270
PaGL#33_01171145-261
PaGL#33_01195153-270
PaGL#33_03861159-386
PaGL#33_03868138-406
Variovorax paradoxus, 2u118 PaGL#32_0550667-329
PaGL#32_0054162-324
PaGL#32_0226467-329
Variovorax paradoxus, SPNA7 PaGL#43_0051862-324
Syntrophus gentianae, DSM8423 Ga0074853_1235:Sgen_0254475-319
Ga0074853_1236:Sgen_0254561-320

PF13332:Fil_haemagg_2. Hemagglutinin repeat

Found 8 similar signatures
FD_25_27, AnGL8 AnGL8_019991405-1469
1506-1647
1683-1774
1885-2046
AnGL8_0200199-263
Variovorax paradoxus, 2u118 PaGL#32_022642357-2429
2439-2522
2589-2762

PF13332:Fil_haemagg_2. Hemagglutinin repeat

Found 8 similar signatures
FD_25_27, AnGL8 AnGL8_019991405-1469
1506-1647
1683-1774
1885-2046
AnGL8_0200199-263
Variovorax paradoxus, 2u118 PaGL#32_022642357-2429
2439-2522
2589-2762

PF13332:Fil_haemagg_2. Hemagglutinin repeat

Found 8 similar signatures
FD_25_27, AnGL8 AnGL8_019991405-1469
1506-1647
1683-1774
1885-2046
AnGL8_0200199-263
Variovorax paradoxus, 2u118 PaGL#32_022642357-2429
2439-2522
2589-2762
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