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PaGL#32_05506 Locus tags: • Sequence Length: 400

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

5050100100150150200200250250300300350350400400
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PaGL#32_00221 PaGL#32_05504 PaGL#32_05505 PaGL#32_00222 PaGL#32_05506 PaGL#32_00223 PaGL#32_05507 PaGL#32_00225 
    [SP]_[PF13018]_[PF05860]_[TM]

    [SP]_[0:PF13018]_[67:PF05860]_[TM]

    [SP]_[0:IPR024973]_[67:IPR008638]_[76:IPR011050]_[87:IPR008638]_[TM]

Looking for similar signatures in the working genomes

PF13018:ESPR. Extended Signal Peptide of Type V secretion system

Found 12 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062820-47
PaGL#33_067680-49
PaGL#33_051620-48
Variovorax paradoxus, 2u118 PaGL#32_055060-47
PaGL#32_061530-38
PaGL#32_022640-49
PaGL#32_039510-47
Variovorax paradoxus, SPNA7 PaGL#43_002460-42
PaGL#43_060860-37
PaGL#43_064670-51
PaGL#43_064900-48
PaGL#43_039940-41

PF05860:TPS. TPS secretion domain

Found 16 similar signatures
FD_25_27, AnGL8 AnGL8_0199926-280
Syntrophus buswellii, Sbus Sbus_0212176-307
Variovorax sp., EBFNA2 PaGL#33_06271166-407
PaGL#33_0055464-294
PaGL#33_06693151-417
PaGL#33_06801154-270
PaGL#33_01171145-261
PaGL#33_01195153-270
PaGL#33_03861159-386
PaGL#33_03868138-406
Variovorax paradoxus, 2u118 PaGL#32_0550667-329
PaGL#32_0054162-324
PaGL#32_0226467-329
Variovorax paradoxus, SPNA7 PaGL#43_0051862-324
Syntrophus gentianae, DSM8423 Ga0074853_1235:Sgen_0254475-319
Ga0074853_1236:Sgen_0254561-320
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