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PaGL#32_03951 Locus tags: • Sequence Length: 1111

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

505010010015015020020025025030030035035040040045045050050055055060060065065070070075075080080085085090090095095010001000105010501100110011501150
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PaGL#32_03946 PaGL#32_03947 PaGL#32_03948 PaGL#32_03951 PaGL#32_03953 PaGL#32_03956 
    [SP]_[PF13018]_[PF18883]_[PF03797]

    [SP]_[0:PF13018]_[538:PF18883]_[788:PF03797]

    [SP]_[0:IPR024973]_[255:IPR011050]_[474:IPR043990]_[538:IPR043990]_[754:IPR036709]_[780:IPR005546]_[784:IPR005546]_[788:IPR005546]

Looking for similar signatures in the working genomes

PF13018:ESPR. Extended Signal Peptide of Type V secretion system

Found 12 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062820-47
PaGL#33_067680-49
PaGL#33_051620-48
Variovorax paradoxus, 2u118 PaGL#32_055060-47
PaGL#32_061530-38
PaGL#32_022640-49
PaGL#32_039510-47
Variovorax paradoxus, SPNA7 PaGL#43_002460-42
PaGL#43_060860-37
PaGL#43_064670-51
PaGL#43_064900-48
PaGL#43_039940-41

PF18883:AC_1. Autochaperone Domain Type 1

Found 6 similar signatures
Variovorax sp., EBFNA2 PaGL#33_062822333-2449
PaGL#33_05162544-660
Variovorax paradoxus, 2u118 PaGL#32_03951538-653
Variovorax paradoxus, SPNA7 PaGL#43_06467869-987
PaGL#43_03994538-653
Sphingomonas sp., CR2A3 PaGL#62_005904809-4911

PF03797:Autotransporter. Autotransporter beta-domain

Found 28 similar signatures
FD_MS_7_1, AnGL28 AnGL28_003881276-1535
AnGL28_02573853-1084
AnGL28_02594661-902
AnGL28_025961054-1296
AnGL28_02684871-1112
AnGL28_03027844-1081
AnGL28_03080850-1097
FD_SO4_37_1, AnGL2 AnGL2_01702853-1084
AnGL2_01723661-902
AnGL2_017251054-1296
AnGL2_01813871-1112
AnGL2_02156844-1081
AnGL2_02209850-1097
AnGL2_030671276-1535
FD-MS-7-8, AnGL9 AnGL9_00115838-1086
AnGL9_011991268-1512
AnGL9_01201662-898
AnGL9_01234932-1176
AnGL9_01304912-1155
AnGL9_02843787-1023
Methylobacterium radiotolerans, GTSA1 PaGL#34_02170773-1033
PaGL#34_04677669-925
Variovorax sp., EBFNA2 PaGL#33_05162763-1009
Variovorax paradoxus, 2u118 PaGL#32_03951788-1033
Variovorax paradoxus, SPNA7 PaGL#43_064671065-1312
PaGL#43_03994795-1040
Sphingomonas sp., CR2A3 PaGL#62_03722914-1135
Syntrophus aciditrophicus, SB 637859797:SYN_01388469-722
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