SMPP Home

MLKi8_02632 Locus tags: • Sequence Length: 657

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550600600650650700700
Show complete sequence
Click domain (colored bar) to show sequence
MLKi8_02627 MLKi8_02628 MLKi8_02629 MLKi8_02630 MLKi8_02632 MLKi8_02633 MLKi8_02634 MLKi8_02635 
    [PF05833]_[PF00860]_[PF05670]_[TM]

    [8:PF05833]_[9:PF00860]_[426:PF05670]_[TM]

    [9:IPR006043]_[426:IPR008532]_[TM]

Looking for similar signatures in the working genomes

PF05833:NFACT_N. NFACT N-terminal and middle domains

Found 40 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520265.1:LOMAGDGF_017113-459
Clostridium acetobutylicum, DSM 1731 WP_010965410.1:FHOCHPCF_021503-450
Acetivibrio alkalicellulosi, DSM 17461 2510061819:NJMEOJLD_020333-458
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939167.1:NEIHKHHH_034353-459
Ruminococcus albus_7, DSM 20455 WP_013499401.1:HCIAFFOI_029043-456
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111348:GJLLLGJL_013173-459
Paenibacillus guangzhouensis, KCTC 33171 WP_152392307.1:KDFAKKPF_007823-462
WP_193726867.1:KDFAKKPF_021493-413
Clostridium acetobutylicum, ATCC 824 WP_010965410.1:OJAMHIDJ_021593-450
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698682.1:PROKKA_023043-456
Syntrophomonas erecta, DSM 16215 OINOEOOJ_005933-460
FD_YE_37_9_2, AnGL4 AnGL4_000832-457
Syntrophomonas curvata, Scurva Scurva_017033-456
Syntrophomonas erecta sporosyntropha, Sespor Sespor_004113-460
Syntrophomonas wolfei methylbutyratica, Swm Swm_014893-459
Terrisporobacter hibernicus, AnGL54 AnGL54_021603-458
Paraclostridium benzoelyticum, AnGL27 AnGL27_032533-460
FD-YE-37-9-3, AnGL29 AnGL29_008082-457
Syntrophomonas erecta, GB-438 Ga0610585_005933-460
Maridesulfovibrio salexigens, AnGL23 AnGL23_005991-88
206-351
Exiguobacterium mexicanum, AnGL24 AnGL24_012163-440
Clostridium subterminale, CB-LS10-1 AnGL53_014333-459
Priestia megaterium, 10L1 PaGL#57_033023-444
Methanospirillum lacunae, Ki8-1 MLKi8_019478-406
Fictibacillus phosphorivorans, TY7 PaGL#38_022203-445
Methanospirillum hungatei, GP1 MhGP1_020788-409
Methanospirillum stamsii, Pt1 MLKi8_026328-405
Syntrophomonas wolfei, saponavida Swsap_026073-448
Bacillus subtilis, 30VD-1 PaGL#66_025653-444
Peribacillus frigoritolerans, 30N-5 PaGL#67_040393-443
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_029633-458
Niallia taxi, AG-1 PaGL#37_013493-443
Methanospirillum.hungatei GP1, MhGP1 8064047470:MhGP1_008258-409
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111306:Mhun_013078-408
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10882:Spalm_013663-100
Ga0128340_10883:Spalm_013671-352
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111348:Swol_013173-459
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12932:Szehn_017493-459
Ruminococcus callidus, ATCC 27760 Rcal_004593-455

PF00860:Xan_ur_permease. Permease family

Found 167 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517459.1:LOMAGDGF_0104316-421
Clostridium acetobutylicum, DSM 1731 WP_010964190.1:FHOCHPCF_0091926-400
WP_010965411.1:FHOCHPCF_0215114-386
WP_010966057.1:FHOCHPCF_0282017-390
WP_010966105.1:FHOCHPCF_0286617-391
Acetivibrio alkalicellulosi, DSM 17461 2510062371:NJMEOJLD_0257116-422
Ruminococcus albus_7, DSM 20455 WP_013497856.1:HCIAFFOI_0120313-418
WP_242837747.1:HCIAFFOI_0120648-437
Paenibacillus guangzhouensis, KCTC 33171 WP_152391747.1:KDFAKKPF_0015017-387
WP_152396081.1:KDFAKKPF_0521216-386
WP_152396405.1:KDFAKKPF_055828-388
WP_152396532.1:KDFAKKPF_0572416-419
WP_152396695.1:KDFAKKPF_0592319-388
WP_152396698.1:KDFAKKPF_0592622-400
Clostridium acetobutylicum, ATCC 824 WP_010964190.1:OJAMHIDJ_0092226-400
WP_010965411.1:OJAMHIDJ_0216014-386
WP_010966057.1:OJAMHIDJ_0282917-390
WP_010966105.1:OJAMHIDJ_0287517-391
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697692.1:PROKKA_0041719-162
193-433
WP_137697919.1:PROKKA_0244378-421
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0184915-389
FD_25_22, AnGL7 AnGL7_0083917-391
AnGL7_0154827-397
FD_25_27, AnGL8 AnGL8_0180117-391
AnGL8_0183318-385
AnGL8_0243019-402
FD_MS_7_1, AnGL28 AnGL28_0030716-389
AnGL28_030017-366
FD_SO4_25_1_F22, AnGL30 AnGL30_0004815-369
AnGL30_0083118-393
FD_SO4_37_1, AnGL2 AnGL2_021307-366
AnGL2_0298616-389
FD_YE_25_21, AnGL21 AnGL21_0066717-391
AnGL21_007473-369
AnGL21_0131123-416
FD_YE_37_3, AnGL26 AnGL26_0160115-370
AnGL26_0185116-391
FD_YE_37_8_2, AnGL3 AnGL3_003259-363
AnGL3_0239817-392
FD_YE_37_9_2, AnGL4 AnGL4_0039912-400
AnGL4_034198-395
Syntrophomonas curvata, Scurva Scurva_0272415-392
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0178815-389
Terrisporobacter hibernicus, AnGL54 AnGL54_0152926-410
AnGL54_021621-359
AnGL54_0298728-397
AnGL54_0352325-400
AnGL54_0364019-392
FD-25-21, AnGL21 AnGL21_0100927-397
AnGL21_0175917-391
Sunxiuqinia elliptica, AnGL22 AnGL22_0160315-370
AnGL22_0184816-391
Paraclostridium benzoelyticum, AnGL27 AnGL27_0106020-391
AnGL27_0106620-399
AnGL27_0241918-395
AnGL27_0263031-409
AnGL27_0293516-391
AnGL27_032542-360
AnGL27_0362129-404
AnGL27_0362229-406
FD-MS-7-8, AnGL9 AnGL9_0043316-389
AnGL9_028167-366
FD-YE-37-9-3, AnGL29 AnGL29_006778-395
AnGL29_0112412-400
Methylobacterium radiotolerans, GTSA1 PaGL#34_0030731-403
PaGL#34_0668821-402
Syntrophomonas erecta, GB-438 Ga0610585_0184915-389
Variovorax sp., EBFNA2 PaGL#33_0008527-398
PaGL#33_0665817-396
PaGL#33_0066136-415
PaGL#33_0097427-417
PaGL#33_0161420-170
209-440
PaGL#33_0165351-422
Variovorax paradoxus, 2u118 PaGL#32_0006727-398
PaGL#32_0398845-416
PaGL#32_0402719-169
208-439
Dietzia cinnamea, 55 PaGL#56_002268-394
PaGL#56_0082635-443
Maridesulfovibrio salexigens, AnGL23 AnGL23_0165313-384
Exiguobacterium mexicanum, AnGL24 AnGL24_0027314-388
AnGL24_002834-384
AnGL24_002864-384
AnGL24_0054333-412
AnGL24_0120515-386
AnGL24_0157012-377
Clostridium subterminale, CB-LS10-1 AnGL53_0109916-402
AnGL53_0162423-380
AnGL53_0214422-405
AnGL53_0215516-400
AnGL53_0305724-401
Priestia megaterium, 10L1 PaGL#57_0197615-402
PaGL#57_0329319-389
PaGL#57_049378-387
PaGL#57_0561740-415
PaGL#57_059783-386
PaGL#57_059994-383
PaGL#57_0616019-390
PaGL#57_0623313-394
PaGL#57_0648022-400
Variovorax paradoxus, SPNA7 PaGL#43_0006727-398
PaGL#43_0404445-416
PaGL#43_0418919-169
208-439
Methanospirillum lacunae, Ki8-1 MLKi8_0201023-395
MLKi8_0207718-398
MLKi8_026329-351
MLKi8_0274017-379
Geodermatophilus sp., RDM14 PaGL#36_0025831-404
PaGL#36_0072674-478
PaGL#36_0205724-407
Methylorubrum populi, CTY4 PaGL#39_0101832-408
PaGL#39_0329133-405
Fictibacillus phosphorivorans, TY7 PaGL#38_0069415-393
PaGL#38_018091-387
PaGL#38_0221018-391
PaGL#38_026114-383
PaGL#38_030879-375
PaGL#38_0465217-398
Methanospirillum hungatei, GP1 MhGP1_013860-377
MhGP1_0287912-393
Bacillus subtilis, 30VD-1 PaGL#66_005071-391
PaGL#66_010688-387
PaGL#66_010696-389
PaGL#66_0133812-395
PaGL#66_020916-385
PaGL#66_0258227-403
PaGL#66_0354415-402
Peribacillus frigoritolerans, 30N-5 PaGL#67_0036013-391
PaGL#67_010958-385
PaGL#67_012413-382
PaGL#67_013208-387
PaGL#67_0233318-391
PaGL#67_024718-386
PaGL#67_0269921-390
PaGL#67_0404818-392
PaGL#67_0464211-391
PaGL#67_0524015-404
Micromonospora inositola, Utrum1 PaGL#61_0070738-446
PaGL#61_0220238-400
PaGL#61_0553538-444
Sphingomonas sp., CR2A3 PaGL#62_0037426-405
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0035325-400
AnGL54_0047019-392
AnGL54_0233626-410
AnGL54_029651-359
AnGL54_0379028-397
Niallia taxi, AG-1 PaGL#37_0422024-395
PaGL#37_0039428-417
PaGL#37_0073513-394
PaGL#37_0491419-395
PaGL#37_0134017-392
PaGL#37_0237220-388
PaGL#37_0343010-389
PaGL#37_035434-383
Methanospirillum.hungatei GP1, MhGP1 8064046648:MhGP1_0002412-393
8064048178:MhGP1_015170-377
Methanospirillum.hungatei.JF-1, MhunJF1 Mhun_023641-354
MPOB, Sfum 639701974:Sfum_0125119-391
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13210:Szehn_0192850-424
Syntrophus aciditrophicus, SB 637860500:SYN_0205114-390
Syntrophus gentianae, DSM8423 Ga0074853_10728:Sgen_0119214-390
Ga0074853_10434:Sgen_0067020-395
Ruminococcus callidus, ATCC 27760 Rcal_0206017-411
Rcal_0206332-407

PF05670:NFACT-R_1. NFACT protein RNA binding domain

Found 82 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520265.1:LOMAGDGF_01711464-565
470-553
Clostridium acetobutylicum, DSM 1731 WP_010965410.1:FHOCHPCF_02150455-555
456-543
Acetivibrio alkalicellulosi, DSM 17461 2510061819:NJMEOJLD_02033465-565
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939167.1:NEIHKHHH_03435464-566
465-553
Ruminococcus albus_7, DSM 20455 WP_013499401.1:HCIAFFOI_02904461-572
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01197222-324
Ga0065332_111348:GJLLLGJL_01317465-558
465-571
Paenibacillus guangzhouensis, KCTC 33171 WP_152392307.1:KDFAKKPF_00782468-566
474-549
WP_193726867.1:KDFAKKPF_02149421-516
421-504
Clostridium acetobutylicum, ATCC 824 WP_010965410.1:OJAMHIDJ_02159455-555
456-543
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698682.1:PROKKA_02304464-564
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00593465-571
OINOEOOJ_00941222-325
FD_MS_7_1, AnGL28 AnGL28_0006014-113
15-98
FD_SO4_37_1, AnGL2 AnGL2_0273914-113
15-98
FD_YE_37_9_2, AnGL4 AnGL4_00083457-561
460-546
Syntrophus buswellii, Sbus Sbus_01796221-323
Syntrophomonas curvata, Scurva Scurva_01472222-323
Scurva_01703464-569
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00064222-325
Sespor_00411465-571
Syntrophomonas wolfei methylbutyratica, Swm Swm_01356222-324
Swm_01489465-555
465-571
Terrisporobacter hibernicus, AnGL54 AnGL54_02160466-567
468-555
Paraclostridium benzoelyticum, AnGL27 AnGL27_03253466-567
468-555
FD-MS-7-8, AnGL9 AnGL9_0065521-113
FD-YE-37-9-3, AnGL29 AnGL29_00808457-561
460-546
Syntrophomonas erecta, GB-438 Ga0610585_00593465-571
Ga0610585_00941222-325
Maridesulfovibrio salexigens, AnGL23 AnGL23_00092226-324
AnGL23_00599379-481
Exiguobacterium mexicanum, AnGL24 AnGL24_01216445-542
450-528
Clostridium subterminale, CB-LS10-1 AnGL53_00244221-324
AnGL53_01433461-563
464-553
Priestia megaterium, 10L1 PaGL#57_03302452-549
455-536
Methanospirillum lacunae, Ki8-1 MLKi8_01947427-532
Fictibacillus phosphorivorans, TY7 PaGL#38_02220452-532
452-549
Methanospirillum hungatei, GP1 MhGP1_02078427-532
Methanospirillum stamsii, Pt1 MLKi8_02632426-531
Syntrophomonas wolfei, saponavida Swsap_02607457-565
Swsap_02999222-321
Bacillus subtilis, 30VD-1 PaGL#66_02565452-549
457-536
Peribacillus frigoritolerans, 30N-5 PaGL#67_04039452-548
460-535
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02963466-567
468-555
Niallia taxi, AG-1 PaGL#37_01349457-548
457-531
Methanospirillum.hungatei GP1, MhGP1 8064047470:MhGP1_00825427-532
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111306:Mhun_01307427-532
MPOB, Sfum 639701825:Sfum_01100225-309
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11112:Spalm_01697378-475
Ga0128340_10883:Spalm_01367354-462
356-447
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01197222-324
Ga0065332_111348:Swol_01317465-571
465-558
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00024221-323
Ga0124040_12932:Szehn_01749464-570
Syntrophus aciditrophicus, SB SYN_01824222-324
Syntrophus gentianae, DSM8423 Ga0074853_107111:Sgen_01271221-323
Ruminococcus callidus, ATCC 27760 Rcal_00459462-563
463-545
Search by locus tag: Search
↑ Top




v4.1 @copyright 2026 UCLA