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Swsap_03238 Locus tags: • Sequence Length: 404

Syntrophomonas wolfei, saponavida Batch4_genome_fasta/bc2031

5050100100150150200200250250300300350350400400450450
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Swsap_03235 unknown unknown Swsap_03238 Swsap_03241 Swsap_03243 
    [SP]_[PF05593]_[PF19078]_[PF17963]_[TM]

    [SP]_[34:PF05593]_[70:PF19078]_[277:PF17963]_[TM]

    [SP]_[34:IPR031325]_[70:IPR032812]_[209:IPR003961]_[209:IPR036116]_[TM]

Looking for similar signatures in the working genomes

PF05593:RHS_repeat. RHS Repeat

Found 256 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522593.1:LOMAGDGF_006231707-1742
1802-1832
2247-2274
WP_014522599.1:LOMAGDGF_00817295-328
462-492
722-759
836-860
977-1015
1127-1164
1169-1206
1190-1227
1294-1329
WP_014522600.1:LOMAGDGF_00820305-334
468-498
558-595
728-765
842-866
983-1021
1133-1170
1175-1212
1300-1335
WP_003523036.1:LOMAGDGF_00910298-331
465-495
725-762
839-863
980-1017
1130-1167
1172-1209
1297-1331
WP_003519391.1:LOMAGDGF_00915484-523
917-946
978-1015
1152-1186
1170-1207
1295-1330
WP_003518927.1:LOMAGDGF_022967-39
173-209
283-317
433-470
547-574
688-726
838-875
880-917
901-933
1005-1039
1094-1128
Acetivibrio alkalicellulosi, DSM 17461 NJMEOJLD_00002200-237
2510060733:NJMEOJLD_0097453-85
2510060840:NJMEOJLD_010771242-1273
2510061008:NJMEOJLD_0124040-77
631-666
1007-1038
1169-1201
2510061010:NJMEOJLD_01242156-188
2510061012:NJMEOJLD_0124446-78
2510061699:NJMEOJLD_019152585-2622
3757-3789
2510062224:NJMEOJLD_024241166-1194
1739-1776
2510063263:NJMEOJLD_0344918-47
2510063264:NJMEOJLD_03451116-153
140-175
158-194
2510063284:NJMEOJLD_03471597-635
849-885
891-936
989-1026
1013-1048
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753279.1:NEIHKHHH_01781426-465
841-878
866-903
1030-1065
1174-1205
WP_050753523.1:NEIHKHHH_032551093-1124
1508-1545
1905-1939
WP_036937631.1:NEIHKHHH_041902421-2458
WP_050753885.1:NEIHKHHH_054811529-1566
WP_036944933.1:NEIHKHHH_055922706-2743
WP_050753963.1:NEIHKHHH_05831426-450
866-903
1030-1065
1174-1205
Ruminococcus albus_7, DSM 20455 WP_013498137.1:HCIAFFOI_015132085-2110
2105-2142
2428-2464
2449-2487
2512-2549
2554-2591
2596-2634
2638-2668
2888-2919
2995-3028
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_244648221.1:PROKKA_0233890-122
243-275
WP_137698541.1:PROKKA_0234191-128
FD_MS_7_1, AnGL28 AnGL28_0060036-68
AnGL28_01476493-523
AnGL28_0332710-41
AnGL28_0333510-41
AnGL28_0333710-41
139-171
AnGL28_033471383-1415
FD_SO4_37_1, AnGL2 AnGL2_00605493-523
AnGL2_0245710-41
AnGL2_0246510-41
AnGL2_0246710-41
139-171
AnGL2_024771383-1415
AnGL2_0327936-68
Syntrophomonas curvata, Scurva Scurva_013911026-1062
1052-1082
1199-1235
Terrisporobacter hibernicus, AnGL54 AnGL54_0356531-71
Variovorax paradoxus, 2u118 PaGL#32_0025324-58
63-100
294-330
315-351
336-370
PaGL#32_00301551-589
593-630
635-671
677-713
979-1016
PaGL#32_06349714-751
756-793
798-835
877-914
PaGL#32_01190389-421
405-442
450-485
539-577
667-705
893-925
PaGL#32_03898557-595
608-635
620-657
667-696
689-720
705-742
Exiguobacterium mexicanum, AnGL24 AnGL24_030821760-1796
2053-2091
2075-2111
Clostridium subterminale, CB-LS10-1 AnGL53_03237872-908
892-922
996-1032
1038-1075
1205-1242
1226-1263
1353-1391
1395-1431
1500-1537
1584-1621
1605-1639
1647-1684
1794-1830
1881-1915
2047-2084
2068-2105
2158-2194
Variovorax paradoxus, SPNA7 PaGL#43_00267549-586
570-606
613-649
633-669
654-684
977-1014
PaGL#43_0586938-62
PaGL#43_06301714-751
756-793
798-835
877-914
1140-1177
PaGL#43_02064164-199
330-370
630-665
726-758
927-965
1176-1210
1218-1245
1301-1338
1329-1362
1346-1383
1391-1428
1436-1467
2514-2545
PaGL#43_04722353-391
941-978
1027-1061
1193-1230
1319-1356
1409-1446
1430-1470
1941-1979
2370-2404
Fictibacillus phosphorivorans, TY7 PaGL#38_00250831-869
894-922
Syntrophomonas wolfei, saponavida Swsap_0323534-61
Swsap_0323834-61
Swsap_03243807-842
894-928
957-991
978-1016
999-1033
1147-1184
1168-1204
1208-1243
1250-1287
Bacillus subtilis, 30VD-1 PaGL#66_003821031-1065
1635-1672
2081-2115
Micromonospora inositola, Utrum1 PaGL#61_013711370-1401
1457-1491
PaGL#61_030801583-1620
PaGL#61_049541275-1311
1663-1699
PaGL#61_049671439-1475
PaGL#61_050311552-1582
1739-1769
Sphingomonas sp., CR2A3 PaGL#62_004861382-1414
1797-1831
2196-2231
2296-2330
2373-2407
2683-2719
PaGL#62_01634282-339
353-390
528-566
1244-1276
1496-1523
1629-1663
2002-2036
2158-2188
PaGL#62_01936344-384
368-398
PaGL#62_02802660-697
1113-1150
1187-1219
1597-1634
1851-1888
2091-2123
2171-2205
PaGL#62_03515341-373
360-389
759-793
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0039531-71
MPOB, Sfum 639702713:Sfum_0200171-96
639702714:Sfum_02002727-762
872-897
639704834:Sfum_041581144-1182
1165-1202
1417-1451
Mucilaginibacter gossypii, cycad 4 PaGL#42_047041100-1123
Ruminococcus callidus, ATCC 27760 Rcal_0171741-72
175-209
Rcal_023791211-1248
1502-1533

PF19078:Big_12. Bacterial Ig-like domain

Found 199 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518117.1:LOMAGDGF_03099611-707
Clostridium acetobutylicum, DSM 1731 WP_010963725.1:FHOCHPCF_00447194-251
256-345
392-424
WP_010964438.1:FHOCHPCF_01180260-364
WP_013913561.1:FHOCHPCF_01927204-301
Acetivibrio alkalicellulosi, DSM 17461 2510060841:NJMEOJLD_01078391-476
2510061561:NJMEOJLD_01780118-216
2510062987:NJMEOJLD_031731016-1112
1134-1235
1240-1335
2613-2714
2718-2819
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940672.1:NEIHKHHH_01180288-399
WP_050753343.1:NEIHKHHH_02134125-218
WP_036942091.1:NEIHKHHH_03208429-526
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00173637-719
GJLLLGJL_00177772-843
Ga0065332_11191:GJLLLGJL_00183146-248
GJLLLGJL_0122544-155
Ga0065332_112123:GJLLLGJL_02078124-210
Ga0065332_112637:GJLLLGJL_0258910-102
GJLLLGJL_0261145-156
Ga0065332_112672:GJLLLGJL_02624986-1077
Paenibacillus guangzhouensis, KCTC 33171 WP_193726703.1:KDFAKKPF_00039204-294
WP_227793462.1:KDFAKKPF_01301418-521
527-629
WP_152393219.1:KDFAKKPF_01828225-327
WP_152394663.1:KDFAKKPF_03502276-369
375-467
WP_152395201.1:KDFAKKPF_041291013-1113
KDFAKKPF_0553049-160
164-275
278-387
Clostridium acetobutylicum, ATCC 824 WP_010963725.1:OJAMHIDJ_00448194-251
256-345
392-424
WP_010964438.1:OJAMHIDJ_01183260-364
WP_010965191.1:OJAMHIDJ_01935204-301
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698636.1:PROKKA_03666553-640
WP_137698637.1:PROKKA_03667551-655
WP_190530414.1:PROKKA_03668551-656
WP_190530415.1:PROKKA_03669551-656
PROKKA_0133866-164
Syntrophomonas erecta, DSM 16215 OINOEOOJ_001179-122
OINOEOOJ_0198240-153
FD_25_27, AnGL8 AnGL8_00335440-522
677-775
887-973
1000-1094
1265-1366
1381-1482
1735-1825
1826-1929
2076-2158
2172-2284
2296-2393
2444-2532
2783-2864
2874-2975
3011-3111
3261-3360
3714-3779
4002-4084
4096-4203
4227-4325
4835-4938
5102-5194
5351-5445
5458-5562
5604-5701
5847-5953
5958-6068
6104-6186
6460-6551
6850-6949
6962-7070
7235-7336
7361-7453
7482-7585
7610-7712
8198-8300
8567-8641
10035-10118
FD_SO4_25_1_F22, AnGL30 AnGL30_0102840-140
FD_YE_37_3, AnGL26 AnGL26_0182633-133
AnGL26_02930524-622
1027-1115
1639-1749
2257-2376
2379-2494
FD_YE_37_8_2, AnGL3 AnGL3_00847740-835
AnGL3_0177727-120
AnGL3_0177929-123
127-221
AnGL3_0247339-139
AnGL3_02883488-583
AnGL3_0329027-142
148-251
372-471
FD_YE_37_9_2, AnGL4 AnGL4_01067430-536
547-642
Syntrophomonas curvata, Scurva Scurva_01526397-504
Scurva_019161609-1711
1711-1812
Scurva_029418-118
Syntrophomonas erecta sporosyntropha, Sespor Sespor_008899-122
Sespor_0159040-153
Sespor_01615191-292
Syntrophomonas wolfei methylbutyratica, Swm Swm_00144394-496
Swm_00166146-248
Swm_00284192-292
Swm_02387123-209
Swm_029816-119
Swm_0300445-156
Swm_03006986-1077
Sunxiuqinia elliptica, AnGL22 AnGL22_0182333-133
AnGL22_02927524-622
1027-1115
1639-1749
2257-2376
2379-2494
FD-MS-7-8, AnGL9 AnGL9_02203725-800
AnGL9_02488186-260
279-351
AnGL9_02636594-667
FD-YE-37-9-3, AnGL29 AnGL29_01792430-536
547-642
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0040937-136
PaGL#35_04941346-462
PaGL#35_04942689-805
Syntrophomonas erecta, GB-438 Ga0610585_001179-122
Ga0610585_0198240-153
Variovorax sp., EBFNA2 PaGL#33_00413436-541
PaGL#33_02482207-295
318-403
429-507
520-617
630-721
740-825
PaGL#33_02748405-518
PaGL#33_0416139-128
147-241
265-341
368-441
PaGL#33_0416246-128
145-233
265-344
353-449
854-949
967-1050
PaGL#33_05145443-547
Variovorax paradoxus, 2u118 PaGL#32_00406436-541
Maridesulfovibrio salexigens, AnGL23 AnGL23_00998205-306
325-410
429-534
1149-1244
1274-1361
1902-1985
1997-2084
Exiguobacterium mexicanum, AnGL24 AnGL24_00036245-344
Clostridium subterminale, CB-LS10-1 AnGL53_00011126-219
221-318
320-416
Priestia megaterium, 10L1 PaGL#57_0472050-153
Variovorax paradoxus, SPNA7 PaGL#43_00379436-541
Geodermatophilus sp., RDM14 PaGL#36_02881709-816
818-922
PaGL#36_034441572-1681
1687-1792
1794-1897
Fictibacillus phosphorivorans, TY7 PaGL#38_0465349-133
Syntrophomonas wolfei, saponavida Swsap_0139942-154
Swsap_01977246-355
Swsap_031211067-1168
Swsap_0320445-144
Swsap_0323570-169
Swsap_0323870-169
Niallia taxi, AG-1 PaGL#37_033511263-1372
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00554485-596
Spalm_0113259-161
168-266
272-371
382-476
479-582
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00173637-719
Swol_00177772-843
Ga0065332_11191:Swol_00183146-248
Swol_0122544-155
Ga0065332_112123:Swol_02078124-210
Ga0065332_112637:Swol_0258910-102
Swol_0261145-156
Ga0065332_112672:Swol_02624986-1077
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1096:Szehn_005771257-1358
Szehn_00582811-906
Szehn_0110546-156
Szehn_01110967-1071
Ga0124040_12820:Szehn_01679188-292
Mucilaginibacter gossypii, cycad 4 PaGL#42_0475536-136

PF17963:Big_9. Bacterial Ig domain

Found 285 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519027.1:LOMAGDGF_01865822-888
912-980
Clostridium acetobutylicum, DSM 1731 WP_010965622.1:FHOCHPCF_02357320-397
419-509
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937940.1:NEIHKHHH_0183642-124
Paenibacillus guangzhouensis, KCTC 33171 WP_152394325.1:KDFAKKPF_031131233-1306
WP_227793641.1:KDFAKKPF_0331878-167
WP_152395866.1:KDFAKKPF_04975570-666
Clostridium acetobutylicum, ATCC 824 WP_010965622.1:OJAMHIDJ_02367320-397
419-509
FD_25_22, AnGL7 AnGL7_003292466-2592
4236-4344
4714-4812
5695-5797
5798-5887
5890-5978
9209-9311
9799-9902
10013-10114
10119-10220
10320-10413
AnGL7_00556424-492
AnGL7_00557226-295
AnGL7_007692994-3057
3061-3153
AnGL7_030842272-2361
2367-2461
2467-2561
2567-2661
3272-3370
3665-3762
3763-3861
AnGL7_03460788-857
FD_25_27, AnGL8 AnGL8_00465606-713
FD_MS_7_1, AnGL28 AnGL28_003721286-1354
1378-1446
AnGL28_03310308-382
FD_SO4_25_1_F22, AnGL30 AnGL30_0069538-115
FD_SO4_37_1, AnGL2 AnGL2_02440308-382
AnGL2_030511286-1354
1378-1446
FD_YE_25_21, AnGL21 AnGL21_015121090-1187
1393-1490
1595-1694
AnGL21_01515155-234
FD_YE_37_3, AnGL26 AnGL26_00881849-919
947-1011
1392-1458
1484-1553
1858-1927
AnGL26_0120835-105
AnGL26_016172490-2567
2572-2661
2664-2758
2774-2855
2862-2949
AnGL26_02545304-392
399-491
505-595
878-950
AnGL26_025942155-2243
2252-2342
FD_YE_37_8_2, AnGL3 AnGL3_00459124-214
AnGL3_0134538-115
AnGL3_02958690-774
AnGL3_035291785-1868
2141-2224
2230-2313
FD_YE_37_9_2, AnGL4 AnGL4_0092371-163
1683-1739
AnGL4_01143717-792
797-883
889-972
Syntrophomonas curvata, Scurva Scurva_00139283-366
Scurva_00140391-470
Scurva_00663131-203
Syntrophomonas wolfei methylbutyratica, Swm Swm_00161765-809
Swm_00352755-812
Terrisporobacter hibernicus, AnGL54 AnGL54_039981196-1270
1358-1421
AnGL54_039991234-1293
AnGL54_04201255-329
335-394
AnGL54_040561034-1095
AnGL54_00800168-232
AnGL54_022911257-1317
1337-1388
1420-1482
FD-25-21, AnGL21 AnGL21_00152121-205
208-298
301-391
394-484
487-585
3437-3546
AnGL21_018311104-1193
2574-2677
2677-2780
2780-2883
2883-2986
3089-3192
AnGL21_02048226-295
AnGL21_02049424-493
AnGL21_02305575-680
1235-1362
3218-3308
4200-4316
4535-4636
4636-4739
4739-4842
4843-4945
4945-5048
5048-5151
5152-5254
5255-5357
5358-5446
5449-5537
8467-8570
8574-8676
9101-9203
9207-9309
9313-9415
9735-9837
9947-10049
10053-10155
10255-10347
AnGL21_02812788-857
Sunxiuqinia elliptica, AnGL22 AnGL22_00882849-919
947-1011
1392-1458
1484-1553
1858-1927
AnGL22_0121035-105
AnGL22_016192490-2567
2572-2661
2664-2758
2774-2855
2862-2949
AnGL22_02542304-392
399-491
505-595
878-950
AnGL22_025912155-2243
2252-2342
FD-MS-7-8, AnGL9 AnGL9_004871035-1119
1122-1211
1217-1310
AnGL9_00813556-626
AnGL9_02532289-369
FD-YE-37-9-3, AnGL29 AnGL29_0164871-163
1683-1739
AnGL29_01868717-792
797-883
889-972
Methylobacterium radiotolerans, GTSA1 PaGL#34_02167131-201
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03249360-446
548-633
Variovorax paradoxus, 2u118 PaGL#32_05451151-231
235-323
443-528
531-619
739-824
827-915
1035-1120
Dietzia cinnamea, 55 PaGL#56_0105467-249
PaGL#56_0287073-152
PaGL#56_0287184-156
PaGL#56_0296768-256
Exiguobacterium mexicanum, AnGL24 AnGL24_00122796-873
AnGL24_02131671-731
842-911
AnGL24_02367211-288
AnGL24_02428882-952
963-1038
Clostridium subterminale, CB-LS10-1 AnGL53_0037871-162
Priestia megaterium, 10L1 PaGL#57_04994221-300
307-385
PaGL#57_06272741-812
814-896
898-979
982-1060
PaGL#57_06330438-510
519-590
601-676
PaGL#57_06371444-525
528-605
610-690
692-771
776-856
858-937
943-1012
1025-1103
Variovorax paradoxus, SPNA7 PaGL#43_05502151-230
234-322
442-527
530-618
738-823
826-914
1034-1119
Geodermatophilus sp., RDM14 PaGL#36_0134646-232
PaGL#36_01462583-672
Syntrophomonas wolfei, saponavida Swsap_02106456-525
Swsap_03121992-1060
Swsap_03235277-364
Swsap_03238277-364
Bacillus subtilis, 30VD-1 PaGL#66_00668300-393
PaGL#66_03091815-892
PaGL#66_03695375-457
Peribacillus frigoritolerans, 30N-5 PaGL#67_00911728-790
806-887
889-970
972-1052
PaGL#67_02040379-460
462-544
546-626
PaGL#67_04360337-418
420-500
502-582
584-663
PaGL#67_04361394-473
647-727
729-808
817-897
899-980
983-1062
1064-1144
1146-1226
1228-1307
Micromonospora inositola, Utrum1 PaGL#61_0150371-256
PaGL#61_0150485-257
PaGL#61_0433655-241
PaGL#61_06316449-522
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_008271196-1270
1358-1421
AnGL54_008281234-1293
AnGL54_008851034-1095
AnGL54_01030255-329
335-394
AnGL54_01530168-232
AnGL54_030941257-1317
1337-1388
1420-1482
Niallia taxi, AG-1 PaGL#37_03351204-292
297-385
388-480
486-575
579-671
676-765
769-861
866-955
959-1051
1056-1144
PaGL#37_03571616-696
698-779
782-862
865-945
947-1026
PaGL#37_03621835-915
918-999
1001-1083
1085-1161
MPOB, Sfum 639701569:Sfum_00839375-444
639701712:Sfum_00984108-196
200-288
292-381
385-472
477-566
Sfum_022191098-1167
1176-1263
639703122:Sfum_02419200-283
286-372
377-462
467-556
639703124:Sfum_02422200-283
286-372
377-466
639703127:Sfum_02425200-283
286-372
431-516
521-606
611-700
639704833:Sfum_04157526-595
Syntrophus aciditrophicus, SB 637858708:SYN_00368590-668
673-759
763-849
854-939
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