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Rcal_02746 Locus tags: • Sequence Length: 416

Ruminococcus callidus, ATCC 27760 Batch5_genome_fasta/bc2083

5050100100150150200200250250300300350350400400450450
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Rcal_02741 Rcal_02742 Rcal_02746 Rcal_02747 Rcal_02748 Rcal_02750 Rcal_02751 
    [SP]_[PF19127]_[PF01473]_[PF01473]_[PF01832]_[TM]

    [SP]_[61:PF19127]_[165:PF01473]_[189:PF01473]_[263:PF01832]_[TM]

    [SP]_[61:IPR018337]_[165:IPR018337]_[189:IPR018337]_[263:IPR002901]_[TM]

Looking for similar signatures in the working genomes

PF19127:Choline_bind_3. Choline-binding repeat

Found 71 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010964394.1:FHOCHPCF_01135277-318
336-376
396-421
517-554
665-702
764-799
844-884
1179-1220
1297-1339
1376-1416
1467-1507
1584-1624
2023-2056
2106-2142
2207-2248
2389-2429
2468-2505
2548-2591
2669-2707
2751-2787
Ruminococcus albus_7, DSM 20455 WP_154662762.1:HCIAFFOI_01761171-212
271-307
572-615
Clostridium acetobutylicum, ATCC 824 WP_010964394.1:OJAMHIDJ_01138277-318
336-376
396-421
517-554
665-702
764-799
844-884
1179-1220
1297-1339
1376-1416
1467-1507
1584-1624
2023-2056
2106-2142
2207-2248
2389-2429
2468-2505
2548-2591
2669-2707
2751-2787
Terrisporobacter hibernicus, AnGL54 AnGL54_04367192-230
233-277
322-366
AnGL54_0092366-106
AnGL54_0140866-108
212-256
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01196192-230
233-277
322-366
AnGL54_0165266-106
AnGL54_0213566-108
212-256
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1096:Szehn_005771903-1938
1942-1987
Szehn_005821468-1505
1519-1556
Ruminococcus callidus, ATCC 27760 Rcal_00338411-451
Rcal_0054871-114
195-234
254-298
Rcal_01224181-219
303-340
344-385
385-423
Rcal_0247690-119
125-165
309-345
Rcal_0274661-103

PF01473:Choline_bind_1. Putative cell wall binding repeat

Found 95 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010964394.1:FHOCHPCF_01135479-496
558-576
606-623
627-642
705-724
805-823
825-843
935-950
952-970
972-991
1050-1069
1070-1088
1090-1108
1528-1547
1552-1567
1628-1642
1645-1660
1806-1825
1826-1841
1866-1884
1990-2003
2152-2166
2187-2201
2288-2306
2308-2326
2328-2347
2348-2367
2370-2385
2509-2528
2593-2609
2610-2629
2630-2649
2711-2730
Ruminococcus albus_7, DSM 20455 WP_154662762.1:HCIAFFOI_0176195-112
252-271
332-349
492-509
556-570
634-651
712-727
Clostridium acetobutylicum, ATCC 824 WP_010964394.1:OJAMHIDJ_01138479-496
558-576
606-623
627-642
705-724
805-823
825-843
935-950
952-970
972-991
1050-1069
1070-1088
1090-1108
1528-1547
1552-1567
1628-1642
1645-1660
1806-1825
1826-1841
1866-1884
1990-2003
2152-2166
2187-2201
2288-2306
2308-2326
2328-2347
2348-2367
2370-2385
2509-2528
2593-2609
2610-2629
2630-2649
2711-2730
Terrisporobacter hibernicus, AnGL54 AnGL54_04367281-297
298-315
AnGL54_00923319-334
AnGL54_01408150-169
192-211
297-312
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01196281-297
298-315
AnGL54_01652319-334
AnGL54_02135150-169
192-211
297-312
Ruminococcus callidus, ATCC 27760 Rcal_00548175-190
236-254
Rcal_0122492-106
284-303
Rcal_02476229-245
252-267
273-288
289-308
Rcal_02746165-181
189-205

PF01473:Choline_bind_1. Putative cell wall binding repeat

Found 95 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010964394.1:FHOCHPCF_01135479-496
558-576
606-623
627-642
705-724
805-823
825-843
935-950
952-970
972-991
1050-1069
1070-1088
1090-1108
1528-1547
1552-1567
1628-1642
1645-1660
1806-1825
1826-1841
1866-1884
1990-2003
2152-2166
2187-2201
2288-2306
2308-2326
2328-2347
2348-2367
2370-2385
2509-2528
2593-2609
2610-2629
2630-2649
2711-2730
Ruminococcus albus_7, DSM 20455 WP_154662762.1:HCIAFFOI_0176195-112
252-271
332-349
492-509
556-570
634-651
712-727
Clostridium acetobutylicum, ATCC 824 WP_010964394.1:OJAMHIDJ_01138479-496
558-576
606-623
627-642
705-724
805-823
825-843
935-950
952-970
972-991
1050-1069
1070-1088
1090-1108
1528-1547
1552-1567
1628-1642
1645-1660
1806-1825
1826-1841
1866-1884
1990-2003
2152-2166
2187-2201
2288-2306
2308-2326
2328-2347
2348-2367
2370-2385
2509-2528
2593-2609
2610-2629
2630-2649
2711-2730
Terrisporobacter hibernicus, AnGL54 AnGL54_04367281-297
298-315
AnGL54_00923319-334
AnGL54_01408150-169
192-211
297-312
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01196281-297
298-315
AnGL54_01652319-334
AnGL54_02135150-169
192-211
297-312
Ruminococcus callidus, ATCC 27760 Rcal_00548175-190
236-254
Rcal_0122492-106
284-303
Rcal_02476229-245
252-267
273-288
289-308
Rcal_02746165-181
189-205

PF01832:Glucosaminidase. Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase

Found 55 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010965622.1:FHOCHPCF_02357619-747
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11406:GJLLLGJL_00393234-330
Paenibacillus guangzhouensis, KCTC 33171 WP_193726874.1:KDFAKKPF_02220221-326
WP_152395005.1:KDFAKKPF_0389612-144
Clostridium acetobutylicum, ATCC 824 WP_010965622.1:OJAMHIDJ_02367619-747
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00405127-260
OINOEOOJ_01904191-329
FD_25_27, AnGL8 AnGL8_00631119-236
AnGL8_02366172-310
FD_SO4_25_1_F22, AnGL30 AnGL30_0045656-185
FD_YE_25_21, AnGL21 AnGL21_01582121-254
AnGL21_02313175-312
FD_YE_37_3, AnGL26 AnGL26_0285234-162
FD_YE_37_8_2, AnGL3 AnGL3_0290336-164
FD_YE_37_9_2, AnGL4 AnGL4_00267287-428
Syntrophomonas curvata, Scurva Scurva_00441166-302
Scurva_00866277-433
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00598127-260
Sespor_01720144-282
Syntrophomonas wolfei methylbutyratica, Swm Swm_00441222-377
Sunxiuqinia elliptica, AnGL22 AnGL22_0284934-162
Paraclostridium benzoelyticum, AnGL27 AnGL27_0121574-212
AnGL27_01551588-726
AnGL27_01642147-286
AnGL27_02032108-219
AnGL27_02279150-286
FD-YE-37-9-3, AnGL29 AnGL29_00992287-428
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0039261-187
PaGL#35_0039333-158
Syntrophomonas erecta, GB-438 Ga0610585_00405127-260
Ga0610585_01904191-329
Variovorax sp., EBFNA2 PaGL#33_01446192-329
Variovorax paradoxus, 2u118 PaGL#32_04278191-326
Exiguobacterium mexicanum, AnGL24 AnGL24_00660827-966
AnGL24_01810230-344
Clostridium subterminale, CB-LS10-1 AnGL53_00138231-372
Variovorax paradoxus, SPNA7 PaGL#43_04439191-326
Fictibacillus phosphorivorans, TY7 PaGL#38_02897307-432
PaGL#38_04200429-546
PaGL#38_04201428-547
Syntrophomonas wolfei, saponavida Swsap_00570127-223
Swsap_0315912-149
Bacillus subtilis, 30VD-1 PaGL#66_00727735-863
PaGL#66_01203120-255
Peribacillus frigoritolerans, 30N-5 PaGL#67_00986884-1016
Niallia taxi, AG-1 PaGL#37_01176849-980
PaGL#37_0301515-145
PaGL#37_035041143-1281
PaGL#37_035451555-1688
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11034:Spalm_01596214-305
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11406:Swol_00393234-330
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14612:Szehn_02453306-410
Mucilaginibacter gossypii, cycad 4 PaGL#42_0477332-159
PaGL#42_0477462-190
Ruminococcus callidus, ATCC 27760 Rcal_02746263-394
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