SMPP Home

NEIHKHHH_05473 Locus tags: • Sequence Length: 1051

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850900900950950100010001050105011001100
Show complete sequence
Click domain (colored bar) to show sequence
NEIHKHHH_05469 NEIHKHHH_05471 NEIHKHHH_05473 NEIHKHHH_05474 NEIHKHHH_05475 NEIHKHHH_05477 NEIHKHHH_05478 
    [SP]_[PF12799]_[PF13306]_[PF13306]_[TM]

    [SP]_[91:PF12799]_[329:PF13306]_[745:PF13306]_[TM]

    [SP]_[91:IPR025875]_[91:IPR001611]_[144:IPR016134]_[146:IPR036439]_[329:IPR026906]_[745:IPR026906]_[TM]

Looking for similar signatures in the working genomes

PF12799:LRR_4. Leucine Rich repeats (2 copies)

Found 79 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517726.1:LOMAGDGF_02359154-193
198-239
Clostridium acetobutylicum, DSM 1731 WP_010966548.1:FHOCHPCF_03327663-705
795-837
WP_010966549.1:FHOCHPCF_03328940-981
WP_013913677.1:FHOCHPCF_03332532-574
620-661
664-706
WP_010966554.1:FHOCHPCF_03333554-596
619-662
754-792
Acetivibrio alkalicellulosi, DSM 17461 2510060638:NJMEOJLD_00882133-174
199-242
244-285
287-330
429-466
472-513
615-658
2510060640:NJMEOJLD_00884133-174
176-219
242-283
2510062060:NJMEOJLD_02268313-351
2510062629:NJMEOJLD_02828156-198
222-265
267-309
310-345
453-496
522-559
690-732
735-769
854-897
988-1029
1175-1217
2510062899:NJMEOJLD_03084112-152
157-198
355-398
402-443
445-485
2510063234:NJMEOJLD_03420312-353
356-396
2510063852:NJMEOJLD_04027230-273
274-318
2510063874:NJMEOJLD_04049330-373
374-423
2510064108:NJMEOJLD_04277176-217
262-302
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753315.1:NEIHKHHH_01947118-160
162-199
489-530
WP_050753434.1:NEIHKHHH_02779278-318
WP_036945214.1:NEIHKHHH_0547391-132
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111471:GJLLLGJL_01441555-596
600-641
Ga0065332_112672:GJLLLGJL_02624728-770
773-805
901-938
Paenibacillus guangzhouensis, KCTC 33171 WP_193726563.1:KDFAKKPF_04097191-227
Clostridium acetobutylicum, ATCC 824 WP_010966548.1:OJAMHIDJ_03337663-705
795-837
WP_010966549.1:OJAMHIDJ_03338940-981
WP_010966553.1:OJAMHIDJ_03342532-574
620-661
664-706
WP_010966554.1:OJAMHIDJ_03343554-596
619-662
754-792
Syntrophomonas wolfei methylbutyratica, Swm Swm_03006751-793
901-938
Terrisporobacter hibernicus, AnGL54 AnGL54_02268377-418
Paraclostridium benzoelyticum, AnGL27 AnGL27_00329112-154
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00974279-318
Methylorubrum populi, CTY4 PaGL#39_0278642-79
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03071377-418
MPOB, Sfum 639703821:Sfum_03088612-654
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111471:Swol_01441555-596
600-641
Ga0065332_112672:Swol_02624728-770
773-805
901-938

PF13306:LRR_5. BspA type Leucine rich repeat region (6 copies)

Found 241 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003522420.1:LOMAGDGF_02644205-325
340-455
556-701
Acetivibrio alkalicellulosi, DSM 17461 2510063222:NJMEOJLD_0340972-195
309-421
502-614
653-734
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753076.1:NEIHKHHH_00839151-277
WP_036940816.1:NEIHKHHH_00932152-279
354-418
519-607
748-814
984-1085
WP_036944238.1:NEIHKHHH_0125229-143
209-289
436-563
590-703
748-858
1003-1044
1072-1123
1226-1339
WP_036945090.1:NEIHKHHH_0129160-117
128-170
WP_036937940.1:NEIHKHHH_01836218-327
334-417
529-633
WP_036944865.1:NEIHKHHH_04508140-243
378-493
712-839
WP_050753754.1:NEIHKHHH_0476890-148
175-228
256-308
338-387
814-900
926-990
1007-1063
1092-1156
WP_036943386.1:NEIHKHHH_0514191-158
182-234
278-334
343-391
WP_050753876.1:NEIHKHHH_0544481-163
184-276
WP_036945214.1:NEIHKHHH_05473329-457
745-872
Ruminococcus albus_7, DSM 20455 WP_028504174.1:HCIAFFOI_03282106-234
WP_013483349.1:HCIAFFOI_0343970-170
174-228
241-306
356-442
WP_013483369.1:HCIAFFOI_03459168-293
WP_013483512.1:HCIAFFOI_0363277-203
WP_013483553.1:HCIAFFOI_03677176-288
WP_013483654.1:HCIAFFOI_0378018-52
104-212
256-305
WP_013483748.1:HCIAFFOI_03879123-229
251-345
360-464
WP_013483917.1:HCIAFFOI_04072926-1037
1057-1186
WP_013497055.1:HCIAFFOI_00315114-233
281-388
403-486
518-564
575-647
657-725
729-831
839-882
935-986
WP_013497072.1:HCIAFFOI_0033280-193
208-301
403-526
WP_013497319.1:HCIAFFOI_00601187-317
WP_013497458.1:HCIAFFOI_00764206-298
WP_013497467.1:HCIAFFOI_0077416-96
WP_013497469.1:HCIAFFOI_0077781-210
WP_013497495.1:HCIAFFOI_00810191-321
421-547
WP_013497527.1:HCIAFFOI_0084982-187
211-300
WP_013497602.1:HCIAFFOI_00934150-277
WP_013497643.1:HCIAFFOI_0097879-214
WP_013497726.1:HCIAFFOI_0106284-189
WP_013497816.1:HCIAFFOI_0115518-52
105-212
256-304
WP_013497850.1:HCIAFFOI_0119793-196
210-238
WP_013498126.1:HCIAFFOI_01502175-279
332-446
WP_013498185.1:HCIAFFOI_0157317-108
WP_013498417.1:HCIAFFOI_01815107-191
WP_013498844.1:HCIAFFOI_0226875-197
WP_013498856.1:HCIAFFOI_02280112-175
WP_013499069.1:HCIAFFOI_02524149-275
WP_013499070.1:HCIAFFOI_02525122-251
WP_013499329.1:HCIAFFOI_0283176-186
200-302
WP_013499359.1:HCIAFFOI_02861124-219
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111471:GJLLLGJL_0144167-183
207-319
Syntrophomonas erecta, DSM 16215 OINOEOOJ_019721470-1570
FD_MS_7_1, AnGL28 AnGL28_0130953-161
319-421
FD_SO4_25_1_F22, AnGL30 AnGL30_02222318-409
415-503
FD_SO4_37_1, AnGL2 AnGL2_0043953-161
319-421
FD_YE_37_3, AnGL26 AnGL26_00444542-628
641-731
742-836
AnGL26_0048338-125
193-308
371-415
471-583
705-828
968-1054
AnGL26_0087575-183
265-375
AnGL26_008991916-2019
Syntrophomonas curvata, Scurva Scurva_0060974-201
219-289
306-421
Syntrophomonas erecta sporosyntropha, Sespor Sespor_016581470-1570
Terrisporobacter hibernicus, AnGL54 AnGL54_045321245-1377
1525-1657
AnGL54_0123451-93
122-191
AnGL54_0187938-143
Sunxiuqinia elliptica, AnGL22 AnGL22_00445542-628
641-731
742-836
AnGL22_0048438-125
193-308
371-415
471-583
705-828
968-1054
AnGL22_0087675-183
265-375
AnGL22_009001916-2019
Syntrophomonas erecta, GB-438 Ga0610585_019721470-1570
Dietzia cinnamea, 55 PaGL#56_025794-90
PaGL#56_0258589-210
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_013621245-1377
1525-1657
AnGL54_0196251-93
122-191
AnGL54_0268338-143
Niallia taxi, AG-1 PaGL#37_05747151-263
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384374-496
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111471:Swol_0144167-183
207-319
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00582215-343
Ruminococcus callidus, ATCC 27760 Rcal_0039474-167
181-257
Rcal_00399156-285
294-397
424-538
Rcal_0041298-187
Rcal_0059175-129
214-326
Rcal_0059280-137
160-277
290-390
489-600
Rcal_00617407-495
Rcal_00618138-246
323-451
483-562
Rcal_0066781-167
270-349
Rcal_0115576-118
155-205
Rcal_0146085-206
358-463
479-593
655-707
729-797
821-884
Rcal_0147092-208
294-378
428-550
672-765
818-910
Rcal_0147182-204
320-398
471-596
623-735
Rcal_01501252-299
310-416
Rcal_01660245-297
304-409
Rcal_01704278-343
375-424
Rcal_01802256-301
309-412
Rcal_01820245-297
304-409
Rcal_0193157-160
237-366
Rcal_01968100-229
Rcal_0197095-224
304-403
405-461
Rcal_0197221-137
162-286
295-387
Rcal_02160159-278
364-414
414-495
589-691
722-786
Rcal_0232822-104
Rcal_0234787-157
193-292
351-462
Rcal_02577102-209
233-332
Rcal_02578174-300
326-440
Rcal_02653152-281
Rcal_0265478-206
307-434
Rcal_0270194-197
224-290
319-417
Rcal_0270381-161
169-288
Rcal_02735129-208
Rcal_0274783-208
237-312
334-459
Rcal_02759130-229
Rcal_0276384-190
273-391
Rcal_0276487-184
276-363
Rcal_0276590-138
165-275

PF13306:LRR_5. BspA type Leucine rich repeat region (6 copies)

Found 241 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003522420.1:LOMAGDGF_02644205-325
340-455
556-701
Acetivibrio alkalicellulosi, DSM 17461 2510063222:NJMEOJLD_0340972-195
309-421
502-614
653-734
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753076.1:NEIHKHHH_00839151-277
WP_036940816.1:NEIHKHHH_00932152-279
354-418
519-607
748-814
984-1085
WP_036944238.1:NEIHKHHH_0125229-143
209-289
436-563
590-703
748-858
1003-1044
1072-1123
1226-1339
WP_036945090.1:NEIHKHHH_0129160-117
128-170
WP_036937940.1:NEIHKHHH_01836218-327
334-417
529-633
WP_036944865.1:NEIHKHHH_04508140-243
378-493
712-839
WP_050753754.1:NEIHKHHH_0476890-148
175-228
256-308
338-387
814-900
926-990
1007-1063
1092-1156
WP_036943386.1:NEIHKHHH_0514191-158
182-234
278-334
343-391
WP_050753876.1:NEIHKHHH_0544481-163
184-276
WP_036945214.1:NEIHKHHH_05473329-457
745-872
Ruminococcus albus_7, DSM 20455 WP_028504174.1:HCIAFFOI_03282106-234
WP_013483349.1:HCIAFFOI_0343970-170
174-228
241-306
356-442
WP_013483369.1:HCIAFFOI_03459168-293
WP_013483512.1:HCIAFFOI_0363277-203
WP_013483553.1:HCIAFFOI_03677176-288
WP_013483654.1:HCIAFFOI_0378018-52
104-212
256-305
WP_013483748.1:HCIAFFOI_03879123-229
251-345
360-464
WP_013483917.1:HCIAFFOI_04072926-1037
1057-1186
WP_013497055.1:HCIAFFOI_00315114-233
281-388
403-486
518-564
575-647
657-725
729-831
839-882
935-986
WP_013497072.1:HCIAFFOI_0033280-193
208-301
403-526
WP_013497319.1:HCIAFFOI_00601187-317
WP_013497458.1:HCIAFFOI_00764206-298
WP_013497467.1:HCIAFFOI_0077416-96
WP_013497469.1:HCIAFFOI_0077781-210
WP_013497495.1:HCIAFFOI_00810191-321
421-547
WP_013497527.1:HCIAFFOI_0084982-187
211-300
WP_013497602.1:HCIAFFOI_00934150-277
WP_013497643.1:HCIAFFOI_0097879-214
WP_013497726.1:HCIAFFOI_0106284-189
WP_013497816.1:HCIAFFOI_0115518-52
105-212
256-304
WP_013497850.1:HCIAFFOI_0119793-196
210-238
WP_013498126.1:HCIAFFOI_01502175-279
332-446
WP_013498185.1:HCIAFFOI_0157317-108
WP_013498417.1:HCIAFFOI_01815107-191
WP_013498844.1:HCIAFFOI_0226875-197
WP_013498856.1:HCIAFFOI_02280112-175
WP_013499069.1:HCIAFFOI_02524149-275
WP_013499070.1:HCIAFFOI_02525122-251
WP_013499329.1:HCIAFFOI_0283176-186
200-302
WP_013499359.1:HCIAFFOI_02861124-219
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111471:GJLLLGJL_0144167-183
207-319
Syntrophomonas erecta, DSM 16215 OINOEOOJ_019721470-1570
FD_MS_7_1, AnGL28 AnGL28_0130953-161
319-421
FD_SO4_25_1_F22, AnGL30 AnGL30_02222318-409
415-503
FD_SO4_37_1, AnGL2 AnGL2_0043953-161
319-421
FD_YE_37_3, AnGL26 AnGL26_00444542-628
641-731
742-836
AnGL26_0048338-125
193-308
371-415
471-583
705-828
968-1054
AnGL26_0087575-183
265-375
AnGL26_008991916-2019
Syntrophomonas curvata, Scurva Scurva_0060974-201
219-289
306-421
Syntrophomonas erecta sporosyntropha, Sespor Sespor_016581470-1570
Terrisporobacter hibernicus, AnGL54 AnGL54_045321245-1377
1525-1657
AnGL54_0123451-93
122-191
AnGL54_0187938-143
Sunxiuqinia elliptica, AnGL22 AnGL22_00445542-628
641-731
742-836
AnGL22_0048438-125
193-308
371-415
471-583
705-828
968-1054
AnGL22_0087675-183
265-375
AnGL22_009001916-2019
Syntrophomonas erecta, GB-438 Ga0610585_019721470-1570
Dietzia cinnamea, 55 PaGL#56_025794-90
PaGL#56_0258589-210
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_013621245-1377
1525-1657
AnGL54_0196251-93
122-191
AnGL54_0268338-143
Niallia taxi, AG-1 PaGL#37_05747151-263
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384374-496
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111471:Swol_0144167-183
207-319
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00582215-343
Ruminococcus callidus, ATCC 27760 Rcal_0039474-167
181-257
Rcal_00399156-285
294-397
424-538
Rcal_0041298-187
Rcal_0059175-129
214-326
Rcal_0059280-137
160-277
290-390
489-600
Rcal_00617407-495
Rcal_00618138-246
323-451
483-562
Rcal_0066781-167
270-349
Rcal_0115576-118
155-205
Rcal_0146085-206
358-463
479-593
655-707
729-797
821-884
Rcal_0147092-208
294-378
428-550
672-765
818-910
Rcal_0147182-204
320-398
471-596
623-735
Rcal_01501252-299
310-416
Rcal_01660245-297
304-409
Rcal_01704278-343
375-424
Rcal_01802256-301
309-412
Rcal_01820245-297
304-409
Rcal_0193157-160
237-366
Rcal_01968100-229
Rcal_0197095-224
304-403
405-461
Rcal_0197221-137
162-286
295-387
Rcal_02160159-278
364-414
414-495
589-691
722-786
Rcal_0232822-104
Rcal_0234787-157
193-292
351-462
Rcal_02577102-209
233-332
Rcal_02578174-300
326-440
Rcal_02653152-281
Rcal_0265478-206
307-434
Rcal_0270194-197
224-290
319-417
Rcal_0270381-161
169-288
Rcal_02735129-208
Rcal_0274783-208
237-312
334-459
Rcal_02759130-229
Rcal_0276384-190
273-391
Rcal_0276487-184
276-363
Rcal_0276590-138
165-275
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA