SMPP Home

HCIAFFOI_03677 Locus tags: • Sequence Length: 681

Ruminococcus albus_7, DSM 20455 GCF_000179635.2

5050100100150150200200250250300300350350400400450450500500550550600600650650700700
Show complete sequence
Click domain (colored bar) to show sequence
HCIAFFOI_04060 unknown unknown hrcA lexA HCIAFFOI_03677 HCIAFFOI_00312murC HCIAFFOI_04062 HCIAFFOI_04063pyk HCIAFFOI_00313 HCIAFFOI_03678 
    [SP]_[PF13306]_[PF01841]_[TM]

    [SP]_[176:PF13306]_[438:PF01841]_[TM]

    [SP]_[176:IPR026906]_[425:IPR038765]_[438:IPR002931]_[589:IPR036439]_[TM]

Looking for similar signatures in the working genomes

PF13306:LRR_5. BspA type Leucine rich repeat region (6 copies)

Found 241 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003522420.1:LOMAGDGF_02644205-325
340-455
556-701
Acetivibrio alkalicellulosi, DSM 17461 2510063222:NJMEOJLD_0340972-195
309-421
502-614
653-734
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753076.1:NEIHKHHH_00839151-277
WP_036940816.1:NEIHKHHH_00932152-279
354-418
519-607
748-814
984-1085
WP_036944238.1:NEIHKHHH_0125229-143
209-289
436-563
590-703
748-858
1003-1044
1072-1123
1226-1339
WP_036945090.1:NEIHKHHH_0129160-117
128-170
WP_036937940.1:NEIHKHHH_01836218-327
334-417
529-633
WP_036944865.1:NEIHKHHH_04508140-243
378-493
712-839
WP_050753754.1:NEIHKHHH_0476890-148
175-228
256-308
338-387
814-900
926-990
1007-1063
1092-1156
WP_036943386.1:NEIHKHHH_0514191-158
182-234
278-334
343-391
WP_050753876.1:NEIHKHHH_0544481-163
184-276
WP_036945214.1:NEIHKHHH_05473329-457
745-872
Ruminococcus albus_7, DSM 20455 WP_028504174.1:HCIAFFOI_03282106-234
WP_013483349.1:HCIAFFOI_0343970-170
174-228
241-306
356-442
WP_013483369.1:HCIAFFOI_03459168-293
WP_013483512.1:HCIAFFOI_0363277-203
WP_013483553.1:HCIAFFOI_03677176-288
WP_013483654.1:HCIAFFOI_0378018-52
104-212
256-305
WP_013483748.1:HCIAFFOI_03879123-229
251-345
360-464
WP_013483917.1:HCIAFFOI_04072926-1037
1057-1186
WP_013497055.1:HCIAFFOI_00315114-233
281-388
403-486
518-564
575-647
657-725
729-831
839-882
935-986
WP_013497072.1:HCIAFFOI_0033280-193
208-301
403-526
WP_013497319.1:HCIAFFOI_00601187-317
WP_013497458.1:HCIAFFOI_00764206-298
WP_013497467.1:HCIAFFOI_0077416-96
WP_013497469.1:HCIAFFOI_0077781-210
WP_013497495.1:HCIAFFOI_00810191-321
421-547
WP_013497527.1:HCIAFFOI_0084982-187
211-300
WP_013497602.1:HCIAFFOI_00934150-277
WP_013497643.1:HCIAFFOI_0097879-214
WP_013497726.1:HCIAFFOI_0106284-189
WP_013497816.1:HCIAFFOI_0115518-52
105-212
256-304
WP_013497850.1:HCIAFFOI_0119793-196
210-238
WP_013498126.1:HCIAFFOI_01502175-279
332-446
WP_013498185.1:HCIAFFOI_0157317-108
WP_013498417.1:HCIAFFOI_01815107-191
WP_013498844.1:HCIAFFOI_0226875-197
WP_013498856.1:HCIAFFOI_02280112-175
WP_013499069.1:HCIAFFOI_02524149-275
WP_013499070.1:HCIAFFOI_02525122-251
WP_013499329.1:HCIAFFOI_0283176-186
200-302
WP_013499359.1:HCIAFFOI_02861124-219
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111471:GJLLLGJL_0144167-183
207-319
Syntrophomonas erecta, DSM 16215 OINOEOOJ_019721470-1570
FD_MS_7_1, AnGL28 AnGL28_0130953-161
319-421
FD_SO4_25_1_F22, AnGL30 AnGL30_02222318-409
415-503
FD_SO4_37_1, AnGL2 AnGL2_0043953-161
319-421
FD_YE_37_3, AnGL26 AnGL26_00444542-628
641-731
742-836
AnGL26_0048338-125
193-308
371-415
471-583
705-828
968-1054
AnGL26_0087575-183
265-375
AnGL26_008991916-2019
Syntrophomonas curvata, Scurva Scurva_0060974-201
219-289
306-421
Syntrophomonas erecta sporosyntropha, Sespor Sespor_016581470-1570
Terrisporobacter hibernicus, AnGL54 AnGL54_045321245-1377
1525-1657
AnGL54_0123451-93
122-191
AnGL54_0187938-143
Sunxiuqinia elliptica, AnGL22 AnGL22_00445542-628
641-731
742-836
AnGL22_0048438-125
193-308
371-415
471-583
705-828
968-1054
AnGL22_0087675-183
265-375
AnGL22_009001916-2019
Syntrophomonas erecta, GB-438 Ga0610585_019721470-1570
Dietzia cinnamea, 55 PaGL#56_025794-90
PaGL#56_0258589-210
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_013621245-1377
1525-1657
AnGL54_0196251-93
122-191
AnGL54_0268338-143
Niallia taxi, AG-1 PaGL#37_05747151-263
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11875:Spalm_02384374-496
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111471:Swol_0144167-183
207-319
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00582215-343
Ruminococcus callidus, ATCC 27760 Rcal_0039474-167
181-257
Rcal_00399156-285
294-397
424-538
Rcal_0041298-187
Rcal_0059175-129
214-326
Rcal_0059280-137
160-277
290-390
489-600
Rcal_00617407-495
Rcal_00618138-246
323-451
483-562
Rcal_0066781-167
270-349
Rcal_0115576-118
155-205
Rcal_0146085-206
358-463
479-593
655-707
729-797
821-884
Rcal_0147092-208
294-378
428-550
672-765
818-910
Rcal_0147182-204
320-398
471-596
623-735
Rcal_01501252-299
310-416
Rcal_01660245-297
304-409
Rcal_01704278-343
375-424
Rcal_01802256-301
309-412
Rcal_01820245-297
304-409
Rcal_0193157-160
237-366
Rcal_01968100-229
Rcal_0197095-224
304-403
405-461
Rcal_0197221-137
162-286
295-387
Rcal_02160159-278
364-414
414-495
589-691
722-786
Rcal_0232822-104
Rcal_0234787-157
193-292
351-462
Rcal_02577102-209
233-332
Rcal_02578174-300
326-440
Rcal_02653152-281
Rcal_0265478-206
307-434
Rcal_0270194-197
224-290
319-417
Rcal_0270381-161
169-288
Rcal_02735129-208
Rcal_0274783-208
237-312
334-459
Rcal_02759130-229
Rcal_0276384-190
273-391
Rcal_0276487-184
276-363
Rcal_0276590-138
165-275

PF01841:Transglut_core. Transglutaminase-like superfamily

Found 186 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511555.1:LOMAGDGF_00655142-253
WP_003519429.1:LOMAGDGF_01117472-590
WP_003515667.1:LOMAGDGF_01198577-693
WP_003512382.1:LOMAGDGF_02041292-405
Clostridium acetobutylicum, DSM 1731 WP_043943655.1:FHOCHPCF_03803484-583
WP_010965705.1:FHOCHPCF_02447258-369
Acetivibrio alkalicellulosi, DSM 17461 2510060150:NJMEOJLD_00408616-733
2510060563:NJMEOJLD_00811375-462
2510061560:NJMEOJLD_0177929-138
2510061707:NJMEOJLD_01923681-798
2510062795:NJMEOJLD_02988142-253
2510062819:NJMEOJLD_03012507-624
2510062842:NJMEOJLD_03035226-376
2510063303:NJMEOJLD_03489380-469
2510063595:NJMEOJLD_03773322-436
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752944.1:NEIHKHHH_00130263-374
WP_050752994.1:NEIHKHHH_00424350-462
WP_050753018.1:NEIHKHHH_00531335-418
WP_050753185.1:NEIHKHHH_01298349-423
WP_160317702.1:NEIHKHHH_01549194-311
WP_036937913.1:NEIHKHHH_01823615-719
WP_050753434.1:NEIHKHHH_02779352-467
WP_036938863.1:NEIHKHHH_03781142-253
WP_050753624.1:NEIHKHHH_03933124-218
WP_036943326.1:NEIHKHHH_05112491-609
WP_036944835.1:NEIHKHHH_05383354-461
WP_036940106.1:NEIHKHHH_05792329-434
Ruminococcus albus_7, DSM 20455 WP_013499674.1:HCIAFFOI_03194163-258
WP_013499675.1:HCIAFFOI_03195103-204
WP_013499700.1:HCIAFFOI_03220138-232
WP_013483553.1:HCIAFFOI_03677438-533
WP_013497173.1:HCIAFFOI_00447204-288
WP_013498359.1:HCIAFFOI_01754539-652
WP_013498874.1:HCIAFFOI_02298472-586
WP_013498958.1:HCIAFFOI_02411304-394
WP_013499425.1:HCIAFFOI_02931235-376
WP_013499574.1:HCIAFFOI_03089345-419
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11190:GJLLLGJL_00182176-262
Paenibacillus guangzhouensis, KCTC 33171 WP_152392103.1:KDFAKKPF_00540438-574
WP_152394183.1:KDFAKKPF_02940131-219
525-594
WP_193726561.1:KDFAKKPF_04078131-222
WP_152396522.1:KDFAKKPF_05713485-604
Clostridium acetobutylicum, ATCC 824 WP_010965705.1:OJAMHIDJ_02457258-369
WP_043943655.1:OJAMHIDJ_03816484-583
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697790.1:PROKKA_00534264-362
WP_190530254.1:PROKKA_01998520-636
WP_244648223.1:PROKKA_02357261-372
FD_25_22, AnGL7 AnGL7_00554116-217
AnGL7_01319143-247
AnGL7_01321144-246
AnGL7_0151157-195
FD_MS_7_1, AnGL28 AnGL28_01920142-248
AnGL28_01922144-244
AnGL28_01953116-217
AnGL28_02529284-398
FD_SO4_25_1_F22, AnGL30 AnGL30_01315153-239
FD_SO4_37_1, AnGL2 AnGL2_01049142-248
AnGL2_01051144-244
AnGL2_01082116-217
AnGL2_01658284-398
FD_YE_25_21, AnGL21 AnGL21_0237232-184
FD_YE_37_3, AnGL26 AnGL26_00010231-335
AnGL26_00469100-262
AnGL26_01447161-237
FD_YE_37_8_2, AnGL3 AnGL3_00843139-234
AnGL3_0097242-172
AnGL3_0201271-177
AnGL3_0327099-262
FD_YE_37_9_2, AnGL4 AnGL4_00672437-520
843-903
AnGL4_00921130-234
AnGL4_01608119-205
AnGL4_0309948-133
AnGL4_03205398-527
Syntrophomonas curvata, Scurva Scurva_0074829-138
Scurva_0233321-137
Syntrophomonas wolfei methylbutyratica, Swm Swm_00165177-263
Terrisporobacter hibernicus, AnGL54 AnGL54_04131197-283
FD-25-21, AnGL21 AnGL21_0104557-195
AnGL21_01248144-246
AnGL21_01250141-247
AnGL21_02051116-217
Sunxiuqinia elliptica, AnGL22 AnGL22_00010231-335
AnGL22_00470100-262
AnGL22_01449161-237
FD-MS-7-8, AnGL9 AnGL9_01273284-397
AnGL9_02074144-250
AnGL9_02076142-243
AnGL9_02113144-245
AnGL9_02283216-283
FD-YE-37-9-3, AnGL29 AnGL29_0035748-133
AnGL29_00463398-527
AnGL29_01397437-520
843-903
AnGL29_01646130-234
AnGL29_02333119-205
Methylobacterium radiotolerans, GTSA1 PaGL#34_00751127-223
PaGL#34_01894132-246
PaGL#34_01896134-243
PaGL#34_02711129-229
PaGL#34_03179130-218
PaGL#34_03797127-225
PaGL#34_06049129-229
PaGL#34_06050145-242
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00676131-235
PaGL#35_00773287-362
PaGL#35_01252101-259
PaGL#35_03850296-396
Variovorax sp., EBFNA2 PaGL#33_00051127-219
PaGL#33_02275144-253
PaGL#33_02278129-246
PaGL#33_02303386-486
PaGL#33_02577131-225
PaGL#33_03268145-252
PaGL#33_0467343-202
Variovorax paradoxus, 2u118 PaGL#32_00536134-228
PaGL#32_0144243-202
PaGL#32_02396146-252
PaGL#32_03472388-485
PaGL#32_03506129-246
PaGL#32_03508135-253
Maridesulfovibrio salexigens, AnGL23 AnGL23_01755143-232
Exiguobacterium mexicanum, AnGL24 AnGL24_00541400-523
Clostridium subterminale, CB-LS10-1 AnGL53_00865254-366
AnGL53_0209541-148
AnGL53_02578498-614
Priestia megaterium, 10L1 PaGL#57_01978424-548
PaGL#57_0397241-139
Variovorax paradoxus, SPNA7 PaGL#43_00513134-228
PaGL#43_0144143-202
PaGL#43_02642146-252
PaGL#43_03519388-485
PaGL#43_03545129-246
PaGL#43_03547135-253
Methanospirillum lacunae, Ki8-1 MLKi8_0118430-137
MLKi8_02091297-405
Geodermatophilus sp., RDM14 PaGL#36_01929438-555
Methylorubrum populi, CTY4 PaGL#39_01954124-224
PaGL#39_02316131-225
PaGL#39_02323129-218
PaGL#39_03120142-246
PaGL#39_03122139-248
Fictibacillus phosphorivorans, TY7 PaGL#38_00692431-555
PaGL#38_00697415-518
Methanospirillum hungatei, GP1 MhGP1_00097302-409
MhGP1_0153829-137
Methanospirillum stamsii, Pt1 MLKi8_00381302-409
MLKi8_0188629-137
MLKi8_03091299-406
Syntrophomonas wolfei, saponavida Swsap_00599144-246
Swsap_0132148-143
Bacillus subtilis, 30VD-1 PaGL#66_03548425-549
Peribacillus frigoritolerans, 30N-5 PaGL#67_0207147-143
PaGL#67_05242431-552
Micromonospora inositola, Utrum1 PaGL#61_04979440-556
PaGL#61_05342430-546
Sphingomonas sp., CR2A3 PaGL#62_01815284-359
PaGL#62_02837145-245
PaGL#62_03454121-217
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00960197-283
Niallia taxi, AG-1 PaGL#37_00382429-551
PaGL#37_0507734-139
PaGL#37_0526028-138
Methanospirillum.hungatei GP1, MhGP1 8064048022:MhGP1_0136429-137
8064049491:MhGP1_02805302-409
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11132:Mhun_0013329-137
Ga0065338_112515:Mhun_02513303-410
MPOB, Sfum 639701578:Sfum_0085045-132
639702305:Sfum_0158722-140
639704047:Sfum_03358359-466
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00783180-280
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11190:Swol_00182176-262
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02055136-241
Ga0124040_12123:Szehn_01173259-371
Syntrophus aciditrophicus, SB 637860509:SYN_02058365-472
637860607:SYN_02150161-276
Mucilaginibacter gossypii, cycad 4 PaGL#42_00317119-220
PaGL#42_02384294-392
PaGL#42_03933101-259
PaGL#42_04411286-360
PaGL#42_05121130-235
Ruminococcus callidus, ATCC 27760 Rcal_00548374-476
Rcal_00617205-309
Rcal_01050537-652
Rcal_01253497-583
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA